RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 HERVK_113P61574 105 aa16.46■□□□□ 0.23
SSBP3-202ENST00000357475 C2orf48Q96LS8 159 aa16.46■□□□□ 0.23
SSBP3-202ENST00000357475 CNBPP62633 177 aaKnown RBP16.45■□□□□ 0.22
SSBP3-202ENST00000357475 CDPF1Q6NVV7 123 aa16.45■□□□□ 0.22
SSBP3-202ENST00000357475 E9PLD3 99 aa16.45■□□□□ 0.22
SSBP3-202ENST00000357475 LEPROTO15243 131 aa16.45■□□□□ 0.22
SSBP3-202ENST00000357475 SYCNQ0VAF6 134 aa16.45■□□□□ 0.22
SSBP3-202ENST00000357475 EPPK1P58107 5090 aaKnown RBP16.43■□□□□ 0.22
SSBP3-202ENST00000357475 IGLV5-52A0A0A0MRZ9 124 aa16.43■□□□□ 0.22
SSBP3-202ENST00000357475 CKS1BP61024 79 aa16.43■□□□□ 0.22
SSBP3-202ENST00000357475 CARD19Q96LW7 228 aa16.43■□□□□ 0.22
SSBP3-202ENST00000357475 DYNC1H1Q14204 4646 aaKnown RBP16.42■□□□□ 0.22
SSBP3-202ENST00000357475 NDUFA1O15239 70 aa16.42■□□□□ 0.22
SSBP3-202ENST00000357475 C6orf48Q9UBA6 75 aa16.42■□□□□ 0.22
SSBP3-202ENST00000357475 J3QQQ9 107 aa16.4■□□□□ 0.22
SSBP3-202ENST00000357475 C9orf116Q5BN46 136 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-202ENST00000357475 PLEKHB2Q96CS7 222 aa16.4■□□□□ 0.22
SSBP3-202ENST00000357475 TTTY13Q9BZ97 58 aa16.4■□□□□ 0.22
SSBP3-202ENST00000357475 ZNF625Q96I27 306 aaPredicted RBP16.4■□□□□ 0.22
SSBP3-202ENST00000357475 PGPEP1Q9NXJ5 209 aa16.39■□□□□ 0.21
SSBP3-202ENST00000357475 C9orf163Q8N9P6 203 aa16.38■□□□□ 0.21
SSBP3-202ENST00000357475 CXCL5P42830 114 aa16.37■□□□□ 0.21
SSBP3-202ENST00000357475 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.36■□□□□ 0.21
SSBP3-202ENST00000357475 F8WDY8 70 aa16.36■□□□□ 0.21
SSBP3-202ENST00000357475 LGALS3P17931 250 aaKnown RBP16.36■□□□□ 0.21
SSBP3-202ENST00000357475 NDUFA12Q9UI09 145 aa16.36■□□□□ 0.21
SSBP3-202ENST00000357475 NMUP48645 174 aa16.35■□□□□ 0.21
SSBP3-202ENST00000357475 LRP1BQ9NZR2 4599 aa16.35■□□□□ 0.21
SSBP3-202ENST00000357475 HSBP1L1C9JCN9 74 aa16.34■□□□□ 0.21
SSBP3-202ENST00000357475 PCP2Q8IVA1 136 aa16.33■□□□□ 0.2
SSBP3-202ENST00000357475 PAM16Q9Y3D7 125 aa16.33■□□□□ 0.2
SSBP3-202ENST00000357475 TRBV30A0A0K0K1B3 111 aa16.32■□□□□ 0.2
SSBP3-202ENST00000357475 DNAH8Q96JB1 4490 aa16.32■□□□□ 0.2
SSBP3-202ENST00000357475 KRTAP10-1P60331 282 aa16.31■□□□□ 0.2
SSBP3-202ENST00000357475 GCSHP23434 173 aa16.3■□□□□ 0.2
SSBP3-202ENST00000357475 RNF151Q2KHN1 245 aa16.3■□□□□ 0.2
SSBP3-202ENST00000357475 SDIM1Q6ZPB5 146 aa16.3■□□□□ 0.2
SSBP3-202ENST00000357475 VAMP8Q9BV40 100 aa16.29■□□□□ 0.2
SSBP3-202ENST00000357475 TP73-AS1Q9UF72 201 aa16.29■□□□□ 0.2
SSBP3-202ENST00000357475 MYMXA0A1B0GTQ4 84 aa16.29■□□□□ 0.2
SSBP3-202ENST00000357475 C16orf90A8MZG2 172 aa16.29■□□□□ 0.2
SSBP3-202ENST00000357475 ZNF815PA8K554 130 aa16.28■□□□□ 0.2
SSBP3-202ENST00000357475 SPATA45Q537H7 98 aa16.28■□□□□ 0.2
SSBP3-202ENST00000357475 ERG28Q9UKR5 140 aa16.27■□□□□ 0.2
SSBP3-202ENST00000357475 CHTF8P0CG12 524 aa16.26■□□□□ 0.19
SSBP3-202ENST00000357475 PFN2P35080 140 aa16.26■□□□□ 0.19
SSBP3-202ENST00000357475 Q6ZRP5 223 aa16.26■□□□□ 0.19
SSBP3-202ENST00000357475 A0A0U1RRA0 63 aa16.25■□□□□ 0.19
SSBP3-202ENST00000357475 PANO1I0J062 215 aa16.25■□□□□ 0.19
SSBP3-202ENST00000357475 A0A096LNI7 61 aa16.24■□□□□ 0.19
SSBP3-202ENST00000357475 HERV-K104P63124 156 aa16.24■□□□□ 0.19
SSBP3-202ENST00000357475 RPL18AQ02543 176 aaKnown RBP16.24■□□□□ 0.19
SSBP3-202ENST00000357475 SFTA2Q6UW10 78 aa16.24■□□□□ 0.19
SSBP3-202ENST00000357475 A0A0J9YXY3 114 aa16.24■□□□□ 0.19
SSBP3-202ENST00000357475 LOC107984640A0A0U1RRK4 108 aa16.24■□□□□ 0.19
SSBP3-202ENST00000357475 TLX1NBP0CAT3 122 aa16.24■□□□□ 0.19
SSBP3-202ENST00000357475 SMIM13P0DJ93 91 aa16.23■□□□□ 0.19
SSBP3-202ENST00000357475 GAGE2BQ13066 116 aa16.23■□□□□ 0.19
SSBP3-202ENST00000357475 FAM30AQ9NZY2 134 aa16.23■□□□□ 0.19
SSBP3-202ENST00000357475 IGKV2-24A0A0C4DH68 120 aa16.22■□□□□ 0.19
SSBP3-202ENST00000357475 NDUFC2-KCTD14E9PQ53 114 aa16.22■□□□□ 0.19
SSBP3-202ENST00000357475 GAGE2EQ4V326 116 aa16.22■□□□□ 0.19
SSBP3-202ENST00000357475 MEIG1Q5JSS6 88 aa16.22■□□□□ 0.19
SSBP3-202ENST00000357475 GAGE2DQ9UEU5 116 aa16.22■□□□□ 0.19
SSBP3-202ENST00000357475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-202ENST00000357475 C14orf144Q96I85 54 aa16.21■□□□□ 0.19
SSBP3-202ENST00000357475 SMIM6P0DI80 62 aa16.2■□□□□ 0.18
SSBP3-202ENST00000357475 APOBP04114 4563 aaKnown RBP16.2■□□□□ 0.18
SSBP3-202ENST00000357475 PTTG1IPP53801 180 aa16.19■□□□□ 0.18
SSBP3-202ENST00000357475 COX8AP10176 69 aa16.19■□□□□ 0.18
SSBP3-202ENST00000357475 LINC00158P58513 81 aa16.19■□□□□ 0.18
SSBP3-202ENST00000357475 DAND5Q8N907 189 aa16.18■□□□□ 0.18
SSBP3-202ENST00000357475 XAGE1AQ9HD64 81 aa16.18■□□□□ 0.18
SSBP3-202ENST00000357475 ADAMTSL4-AS1Q5T5F5 129 aa16.17■□□□□ 0.18
SSBP3-202ENST00000357475 COX17Q14061 63 aa16.16■□□□□ 0.18
SSBP3-202ENST00000357475 BOD1L2Q8IYS8 172 aa16.16■□□□□ 0.18
SSBP3-202ENST00000357475 LITAFQ99732 161 aa16.16■□□□□ 0.18
SSBP3-202ENST00000357475 C9orf129Q5T035 196 aaKnown RBP16.15■□□□□ 0.18
SSBP3-202ENST00000357475 HAMPP81172 84 aa16.14■□□□□ 0.18
SSBP3-202ENST00000357475 SCGB1D4Q6XE38 83 aa16.14■□□□□ 0.18
SSBP3-202ENST00000357475 MIR7-3HGQ8N6C7 128 aa16.14■□□□□ 0.18
SSBP3-202ENST00000357475 Q6ZSA8 131 aa16.14■□□□□ 0.17
SSBP3-202ENST00000357475 SPACA4Q8TDM5 124 aa16.14■□□□□ 0.17
SSBP3-202ENST00000357475 SND1-IT1Q9HBX3 110 aa16.14■□□□□ 0.17
SSBP3-202ENST00000357475 S100A12P80511 92 aa16.13■□□□□ 0.17
SSBP3-202ENST00000357475 FAM168BA1KXE4 195 aa16.11■□□□□ 0.17
SSBP3-202ENST00000357475 CIRBPQ14011 172 aaKnown RBP16.11■□□□□ 0.17
SSBP3-202ENST00000357475 LINC00587B1AMM8 73 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 EIF4EBP3O60516 100 aaPredicted RBP16.09■□□□□ 0.17
SSBP3-202ENST00000357475 C12orf57Q99622 126 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 PKIGQ9Y2B9 76 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 A0A1W2PNN7 141 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 TIMM17BO60830 172 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 NPC2P61916 151 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 KRTAP7-1Q8IUC3 87 aa16.09■□□□□ 0.17
SSBP3-202ENST00000357475 DLEU1O43261 78 aa16.08■□□□□ 0.16
SSBP3-202ENST00000357475 SLC25A34Q6PIV7 304 aa16.08■□□□□ 0.16
SSBP3-202ENST00000357475 Q8NDZ9 215 aa16.08■□□□□ 0.16
SSBP3-202ENST00000357475 A0A087WYN8 130 aa16.06■□□□□ 0.16
SSBP3-202ENST00000357475 SOSTDC1Q6X4U4 206 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms