RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TCTE3Q8IZS6 198 aa5.06□□□□□ -1.6
COL4A3BP-202ENST00000357457 SMIM7Q9BQ49 75 aa5.06□□□□□ -1.6
COL4A3BP-202ENST00000357457 HBBP68871 147 aa5.05□□□□□ -1.6
COL4A3BP-202ENST00000357457 LINC01561Q8N1V8 128 aa5.05□□□□□ -1.6
COL4A3BP-202ENST00000357457 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
COL4A3BP-202ENST00000357457 PCP4L1A6NKN8 68 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 IFITM10A6NMD0 228 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 NUPR1O60356 82 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 TSPAN13O95857 204 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 CKS2P33552 79 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 CEBPGP53567 150 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 LINC00242Q5T6M2 205 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 ERASQ7Z444 233 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 SMIM2Q9BVW6 85 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 NAT8BQ9UHF3 227 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 PYGO1Q9Y3Y4 419 aa5.04□□□□□ -1.6
COL4A3BP-202ENST00000357457 A0A087X002 238 aa5.03□□□□□ -1.6
COL4A3BP-202ENST00000357457 TGIF2-C20orf24A0A0A6YYL0 155 aa5.03□□□□□ -1.6
COL4A3BP-202ENST00000357457 A0A1B0GW15 77 aa5.03□□□□□ -1.6
COL4A3BP-202ENST00000357457 ZNF727A8MUV8 499 aa5.03□□□□□ -1.6
COL4A3BP-202ENST00000357457 PACRGQ96M98 296 aaPredicted RBP5.03□□□□□ -1.6
COL4A3BP-202ENST00000357457 C22orf24Q9Y442 160 aa5.03□□□□□ -1.6
COL4A3BP-202ENST00000357457 SMIM27A0A1W2PRY6 76 aa5.02□□□□□ -1.61
COL4A3BP-202ENST00000357457 SRP19P09132 144 aaKnown RBP5.02□□□□□ -1.61
COL4A3BP-202ENST00000357457 EIF5A2Q9GZV4 153 aaKnown RBP5.02□□□□□ -1.61
COL4A3BP-202ENST00000357457 IGLV4-3A0A075B6K6 122 aa5.01□□□□□ -1.61
COL4A3BP-202ENST00000357457 HSBP1L1C9JCN9 74 aa5.01□□□□□ -1.61
COL4A3BP-202ENST00000357457 CRYGAP11844 174 aa5.01□□□□□ -1.61
COL4A3BP-202ENST00000357457 ALKAL2Q6UX46 152 aa5.01□□□□□ -1.61
COL4A3BP-202ENST00000357457 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
COL4A3BP-202ENST00000357457 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
COL4A3BP-202ENST00000357457 D6R8Y8 96 aa5□□□□□ -1.61
COL4A3BP-202ENST00000357457 BCE1O60756 84 aa5□□□□□ -1.61
COL4A3BP-202ENST00000357457 NPYP01303 97 aa5□□□□□ -1.61
COL4A3BP-202ENST00000357457 PPBPP02775 128 aa5□□□□□ -1.61
COL4A3BP-202ENST00000357457 IFI27P40305 119 aaPredicted RBP5□□□□□ -1.61
COL4A3BP-202ENST00000357457 RPL28P46779 137 aaKnown RBP5□□□□□ -1.61
COL4A3BP-202ENST00000357457 RPL23P62829 140 aaKnown RBP5□□□□□ -1.61
COL4A3BP-202ENST00000357457 TMEM141Q96I45 108 aa5□□□□□ -1.61
COL4A3BP-202ENST00000357457 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 F8W036 122 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 CTAG1AP78358 180 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 PNRC1Q12796 327 aaPredicted RBP4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 Q6ZN92 141 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 FAM19A3Q7Z5A8 133 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 AMELXQ99217 191 aa4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 ALKBH7Q9BT30 221 aaPredicted RBP4.99□□□□□ -1.61
COL4A3BP-202ENST00000357457 S100A8P05109 93 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 RAB5AP20339 215 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 HERV-K104P63124 156 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 C6orf226Q5I0X4 101 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 C2orf66Q6UXQ4 117 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 TEX43Q6ZNM6 134 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 LINC00173Q6ZV60 143 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 MRPL55Q7Z7F7 128 aaKnown RBP4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 Q8IZM0 81 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 XAGE1AQ9HD64 81 aa4.98□□□□□ -1.61
COL4A3BP-202ENST00000357457 PRSS2P07478 247 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 CKS1BP61024 79 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 FAM229BQ4G0N7 80 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 TMEM136Q6ZRR5 245 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 ORMDL3Q8N138 153 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 ANAPC11Q9NYG5 84 aa4.97□□□□□ -1.61
COL4A3BP-202ENST00000357457 C9JQL5 133 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 ADIRFQ15847 76 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 ZC2HC1BQ5TFG8 222 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 MRPL54Q6P161 138 aaKnown RBP4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 PRELID3AQ96N28 172 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 C2orf88Q9BSF0 95 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 TOMM7Q9P0U1 55 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 NAT8Q9UHE5 227 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
COL4A3BP-202ENST00000357457 IGIPA6NJ69 53 aa4.95□□□□□ -1.62
COL4A3BP-202ENST00000357457 F8VRH5 84 aa4.95□□□□□ -1.62
COL4A3BP-202ENST00000357457 S100A6P06703 90 aa4.95□□□□□ -1.62
COL4A3BP-202ENST00000357457 LINC00304Q8N9R0 145 aa4.95□□□□□ -1.62
COL4A3BP-202ENST00000357457 CYSLTR1Q9Y271 337 aa4.95□□□□□ -1.62
COL4A3BP-202ENST00000357457 LAMTOR2Q9Y2Q5 125 aa4.95□□□□□ -1.62
COL4A3BP-202ENST00000357457 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 RPL37AP8A6NKH3 93 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 HERVK_113P63121 156 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 ATP5L2Q7Z4Y8 100 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 Q8N8P6 123 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 CDKN2A-AS1Q9UH64 79 aa4.94□□□□□ -1.62
COL4A3BP-202ENST00000357457 LOC389332A0A1B0GUA5 103 aa4.93□□□□□ -1.62
COL4A3BP-202ENST00000357457 K7EMI3 77 aa4.93□□□□□ -1.62
COL4A3BP-202ENST00000357457 CXCL5P42830 114 aa4.93□□□□□ -1.62
COL4A3BP-202ENST00000357457 SEC61GP60059 68 aa4.93□□□□□ -1.62
COL4A3BP-202ENST00000357457 SEC11AP67812 179 aa4.93□□□□□ -1.62
COL4A3BP-202ENST00000357457 Q75L30 129 aa4.93□□□□□ -1.62
COL4A3BP-202ENST00000357457 ORMDL2Q53FV1 153 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms