RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MIR7-3HGQ8N6C7 128 aa5.86□□□□□ -1.47
CDC42SE1-201ENST00000357235 LOC100131303A0A0U1RQF7 123 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 MTORP42345 2549 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 IGLV5-45A0A087WSX0 123 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 K7EQD1 137 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 DEFB114Q30KQ6 69 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 Q96MF0 132 aa5.85□□□□□ -1.47
CDC42SE1-201ENST00000357235 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 S100A7L2Q5SY68 101 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 SND1-IT1Q9HBX3 110 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 ODF3L2Q3SX64 289 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 C9orf129Q5T035 196 aaKnown RBP5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 HIST2H2BCQ6DN03 193 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 Q6YL49 198 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 C1orf158Q8N1D5 194 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 WFDC9Q8NEX5 89 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 OVOL2Q9BRP0 275 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 CDC42SE2Q9NRR3 84 aa5.84□□□□□ -1.47
CDC42SE1-201ENST00000357235 WFDC10AQ9H1F0 79 aa5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 LINC00474Q9P2X8 69 aa5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 FLNBO75369 2602 aaKnown RBP5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 AKAP9Q99996 3911 aa5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 PAX4O43316 350 aa5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 LYPD5Q6UWN5 251 aa5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 GCN1Q92616 2671 aaKnown RBP5.83□□□□□ -1.48
CDC42SE1-201ENST00000357235 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 LINC00482Q8N8I6 264 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 TRGV4A0A0C4DH28 118 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 SLPIP03973 132 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 IL17DQ8TAD2 202 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 BAHCC1Q9P281 2608 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 A0A087WYN8 130 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 CCKP06307 115 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
CDC42SE1-201ENST00000357235 ACANP16112 2415 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 NBEAL2Q6ZNJ1 2754 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 TRBV7-6A0A0J9YX20 115 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 NCR3O14931 201 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 RNASE1P07998 156 aaKnown RBP5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 DSCR9P59020 149 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 CLPSL2Q6UWE3 100 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 TRAV7A0A075B6U4 112 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 LECT2O14960 151 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 C4orf3Q8WVX3 66 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 OBSCN-AS1Q96MR7 158 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 HECTD1Q9ULT8 2610 aa5.81□□□□□ -1.48
CDC42SE1-201ENST00000357235 F8WEM9 126 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 IGLV4-60A0A075B6I1 120 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 KLKP1Q107X0 134 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 IGKV2-28A0A075B6P5 120 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 TRBV10-1A0A0K0K1A3 114 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 IGKV2D-28P01615 120 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 PF4P02776 101 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 IGHV4-31P0DP07 118 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 DEFB130BP0DP73 79 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 DEFB130AP0DP74 79 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 SS18Q15532 418 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 NOTCH2Q04721 2471 aa5.8□□□□□ -1.48
CDC42SE1-201ENST00000357235 A0A096LPF7 62 aa5.79□□□□□ -1.48
CDC42SE1-201ENST00000357235 A8MTW9 85 aa5.79□□□□□ -1.48
CDC42SE1-201ENST00000357235 C6orf226Q5I0X4 101 aa5.79□□□□□ -1.48
CDC42SE1-201ENST00000357235 CCL18P55774 89 aa5.79□□□□□ -1.48
CDC42SE1-201ENST00000357235 KRTAP10-9P60411 292 aa5.79□□□□□ -1.48
CDC42SE1-201ENST00000357235 RMI2Q96E14 147 aa5.79□□□□□ -1.48
CDC42SE1-201ENST00000357235 ZNF469Q96JG9 3925 aaPredicted RBP5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 SETXQ7Z333 2677 aaKnown RBP5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 TENM4Q6N022 2769 aa5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 H0YGX0 51 aa5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 CCL24O00175 119 aa5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 MPLKIPQ8TAP9 179 aa5.78□□□□□ -1.48
CDC42SE1-201ENST00000357235 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 BCE1O60756 84 aa5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 PRR3P79522 188 aaKnown RBP5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 UBR5O95071 2799 aaPredicted RBP5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 A0A096LNT2 108 aa5.77□□□□□ -1.49
CDC42SE1-201ENST00000357235 NDUFC1O43677 76 aa5.76□□□□□ -1.49
CDC42SE1-201ENST00000357235 ATP5EP56381 51 aaPredicted RBP5.76□□□□□ -1.49
CDC42SE1-201ENST00000357235 ORMDL1Q9P0S3 153 aa5.75□□□□□ -1.49
CDC42SE1-201ENST00000357235 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
CDC42SE1-201ENST00000357235 FLNAP21333 2647 aaKnown RBP5.75□□□□□ -1.49
CDC42SE1-201ENST00000357235 HIVEP2P31629 2446 aa5.75□□□□□ -1.49
CDC42SE1-201ENST00000357235 IGLV10-54A0A075B6I4 117 aa5.74□□□□□ -1.49
CDC42SE1-201ENST00000357235 IGHV3OR16-9A0A0B4J2B5 98 aa5.74□□□□□ -1.49
CDC42SE1-201ENST00000357235 JMJD7-PLA2G4BH0Y9G9 81 aa5.74□□□□□ -1.49
CDC42SE1-201ENST00000357235 C16orf74Q96GX8 76 aa5.74□□□□□ -1.49
CDC42SE1-201ENST00000357235 FAM19A3Q7Z5A8 133 aa5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 RETNQ9HD89 108 aa5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 ESM1Q9NQ30 184 aa5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 CR1P17927 2039 aa5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 ITPR3Q14573 2671 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms