RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 DNAH2Q9P225 4427 aa15.96■□□□□ 0.15
CHKA-202ENST00000356135 FXYD2P54710 66 aa15.94■□□□□ 0.14
CHKA-202ENST00000356135 MALP21145 153 aa15.93■□□□□ 0.14
CHKA-202ENST00000356135 ZNF625Q96I27 306 aaPredicted RBP15.93■□□□□ 0.14
CHKA-202ENST00000356135 A6NDN8 102 aa15.92■□□□□ 0.14
CHKA-202ENST00000356135 TMEM238C9JI98 176 aa15.92■□□□□ 0.14
CHKA-202ENST00000356135 SRSF9Q13242 221 aaKnown RBP eCLIP15.92■□□□□ 0.14
CHKA-202ENST00000356135 Q6ZRN7 208 aaPredicted RBP15.92■□□□□ 0.14
CHKA-202ENST00000356135 C6orf223Q8N319 242 aa15.92■□□□□ 0.14
CHKA-202ENST00000356135 COX7B2Q8TF08 81 aa15.92■□□□□ 0.14
CHKA-202ENST00000356135 LITAFQ99732 161 aa15.91■□□□□ 0.14
CHKA-202ENST00000356135 LECT2O14960 151 aa15.9■□□□□ 0.14
CHKA-202ENST00000356135 PSCAO43653 123 aa15.9■□□□□ 0.14
CHKA-202ENST00000356135 TIMM17BO60830 172 aa15.9■□□□□ 0.14
CHKA-202ENST00000356135 COX11Q9Y6N1 276 aa15.9■□□□□ 0.14
CHKA-202ENST00000356135 HERV-K104P63124 156 aa15.89■□□□□ 0.13
CHKA-202ENST00000356135 KMT2CQ8NEZ4 4911 aaKnown RBP15.89■□□□□ 0.13
CHKA-202ENST00000356135 PTTG1IPP53801 180 aa15.88■□□□□ 0.13
CHKA-202ENST00000356135 C1orf134Q5TEV5 83 aa15.88■□□□□ 0.13
CHKA-202ENST00000356135 A0A1B0GV90 55 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 WFDC2Q14508 124 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 TOMM7Q9P0U1 55 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 C15orf56Q8N910 161 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 LINC00526Q96FQ7 95 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 SPANXDQ9BXN6 97 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 SPANXCQ9NY87 97 aa15.87■□□□□ 0.13
CHKA-202ENST00000356135 HIGD2BQ4VC39 106 aa15.86■□□□□ 0.13
CHKA-202ENST00000356135 TAX1BP3O14907 124 aa15.85■□□□□ 0.13
CHKA-202ENST00000356135 SFTA2Q6UW10 78 aa15.85■□□□□ 0.13
CHKA-202ENST00000356135 Q8IZM0 81 aa15.85■□□□□ 0.13
CHKA-202ENST00000356135 USP17L23D6RBM5 183 aa15.85■□□□□ 0.13
CHKA-202ENST00000356135 Q6ZVH6 145 aa15.85■□□□□ 0.13
CHKA-202ENST00000356135 TMEM238LA0A1B0GVL6 79 aa15.84■□□□□ 0.13
CHKA-202ENST00000356135 A6NJY4 79 aa15.84■□□□□ 0.13
CHKA-202ENST00000356135 APOMO95445 188 aa15.84■□□□□ 0.13
CHKA-202ENST00000356135 ADAMTSL4-AS1Q5T5F5 129 aa15.83■□□□□ 0.12
CHKA-202ENST00000356135 CIRBPQ14011 172 aaKnown RBP15.82■□□□□ 0.12
CHKA-202ENST00000356135 NHP2Q9NX24 153 aaKnown RBP15.82■□□□□ 0.12
CHKA-202ENST00000356135 A0A1B0GWB2 263 aa15.82■□□□□ 0.12
CHKA-202ENST00000356135 KIAA0087Q14695 138 aa15.82■□□□□ 0.12
CHKA-202ENST00000356135 RYR2Q92736 4967 aa15.81■□□□□ 0.12
CHKA-202ENST00000356135 SPAG11BQ08648 103 aa15.81■□□□□ 0.12
CHKA-202ENST00000356135 LRCOL1A6NCL2 159 aa15.8■□□□□ 0.12
CHKA-202ENST00000356135 PRSS2P07478 247 aa15.8■□□□□ 0.12
CHKA-202ENST00000356135 SMIM13P0DJ93 91 aa15.8■□□□□ 0.12
CHKA-202ENST00000356135 C6orf226Q5I0X4 101 aa15.8■□□□□ 0.12
CHKA-202ENST00000356135 CFAP161Q6P656 301 aa15.8■□□□□ 0.12
CHKA-202ENST00000356135 RTL8CO15255 209 aa15.79■□□□□ 0.12
CHKA-202ENST00000356135 MEIG1Q5JSS6 88 aa15.78■□□□□ 0.12
CHKA-202ENST00000356135 C2orf82Q6UX34 121 aa15.78■□□□□ 0.12
CHKA-202ENST00000356135 MUSTN1Q8IVN3 82 aa15.78■□□□□ 0.12
CHKA-202ENST00000356135 DNAH17Q9UFH2 4485 aa15.78■□□□□ 0.12
CHKA-202ENST00000356135 K7ERJ3 54 aa15.77■□□□□ 0.12
CHKA-202ENST00000356135 CXCL5P42830 114 aa15.77■□□□□ 0.12
CHKA-202ENST00000356135 RPL24P83731 157 aaKnown RBP15.77■□□□□ 0.12
CHKA-202ENST00000356135 FRAS1Q86XX4 4008 aa15.77■□□□□ 0.12
CHKA-202ENST00000356135 GVQW2A0A096LPI5 108 aaPredicted RBP15.77■□□□□ 0.11
CHKA-202ENST00000356135 ZNF561-AS1K7EIQ3 104 aa15.77■□□□□ 0.11
CHKA-202ENST00000356135 IFITM1P13164 125 aa15.77■□□□□ 0.11
CHKA-202ENST00000356135 NTN5Q8WTR8 489 aaPredicted RBP15.75■□□□□ 0.11
CHKA-202ENST00000356135 TNP2Q05952 138 aa15.74■□□□□ 0.11
CHKA-202ENST00000356135 A0A087WTM6 91 aa15.73■□□□□ 0.11
CHKA-202ENST00000356135 A4D1N5 150 aa15.73■□□□□ 0.11
CHKA-202ENST00000356135 SLPIP03973 132 aa15.73■□□□□ 0.11
CHKA-202ENST00000356135 C10orf25Q5T742 122 aa15.73■□□□□ 0.11
CHKA-202ENST00000356135 DAND5Q8N907 189 aa15.73■□□□□ 0.11
CHKA-202ENST00000356135 C9orf118A6NHY6 69 aa15.72■□□□□ 0.11
CHKA-202ENST00000356135 CKS1BP61024 79 aa15.72■□□□□ 0.11
CHKA-202ENST00000356135 UNQ6190/PRO20217Q6UXQ8 127 aa15.72■□□□□ 0.11
CHKA-202ENST00000356135 RAB37Q96AX2 223 aa15.72■□□□□ 0.11
CHKA-202ENST00000356135 PPDPFQ9H3Y8 114 aa15.72■□□□□ 0.11
CHKA-202ENST00000356135 COPS9Q8WXC6 57 aa15.72■□□□□ 0.11
CHKA-202ENST00000356135 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.71■□□□□ 0.11
CHKA-202ENST00000356135 LINC00308Q8TCZ7 52 aa15.71■□□□□ 0.11
CHKA-202ENST00000356135 CFC1BP0CG36 223 aa15.7■□□□□ 0.1
CHKA-202ENST00000356135 CFC1P0CG37 223 aa15.7■□□□□ 0.1
CHKA-202ENST00000356135 CAMK2N2Q96S95 79 aa15.7■□□□□ 0.1
CHKA-202ENST00000356135 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.7■□□□□ 0.1
CHKA-202ENST00000356135 A0A0U1RRA0 63 aa15.7■□□□□ 0.1
CHKA-202ENST00000356135 ERG28Q9UKR5 140 aa15.7■□□□□ 0.1
CHKA-202ENST00000356135 A0A0B4J2C4 111 aa15.68■□□□□ 0.1
CHKA-202ENST00000356135 Q6ZRU5 148 aa15.68■□□□□ 0.1
CHKA-202ENST00000356135 Q8N814 137 aa15.68■□□□□ 0.1
CHKA-202ENST00000356135 EIF4EBP3O60516 100 aaPredicted RBP15.67■□□□□ 0.1
CHKA-202ENST00000356135 NPC2P61916 151 aa15.67■□□□□ 0.1
CHKA-202ENST00000356135 C2orf48Q96LS8 159 aa15.67■□□□□ 0.1
CHKA-202ENST00000356135 FUSP35637 526 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHKA-202ENST00000356135 H3BUT2 72 aa15.66■□□□□ 0.1
CHKA-202ENST00000356135 LINC00158P58513 81 aa15.66■□□□□ 0.1
CHKA-202ENST00000356135 C9orf116Q5BN46 136 aaPredicted RBP15.66■□□□□ 0.1
CHKA-202ENST00000356135 SOSTDC1Q6X4U4 206 aa15.66■□□□□ 0.1
CHKA-202ENST00000356135 MIR7-3HGQ8N6C7 128 aa15.66■□□□□ 0.1
CHKA-202ENST00000356135 FAT2Q9NYQ8 4349 aa15.65■□□□□ 0.1
CHKA-202ENST00000356135 SYCNQ0VAF6 134 aa15.65■□□□□ 0.1
CHKA-202ENST00000356135 C14orf177Q52M58 125 aa15.65■□□□□ 0.1
CHKA-202ENST00000356135 C6orf48Q9UBA6 75 aa15.65■□□□□ 0.1
CHKA-202ENST00000356135 RYR3Q15413 4870 aa15.64■□□□□ 0.09
CHKA-202ENST00000356135 COX17Q14061 63 aa15.64■□□□□ 0.09
CHKA-202ENST00000356135 PFN2P35080 140 aa15.62■□□□□ 0.09
CHKA-202ENST00000356135 NAA38Q9BRA0 125 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms