RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 H0Y9P7 68 aa12.61□□□□□ -0.39
COL27A1-201ENST00000356083 COX17Q14061 63 aa12.61□□□□□ -0.39
COL27A1-201ENST00000356083 COL27A1Q8IZC6 1860 aaPredicted RBP12.61□□□□□ -0.39
COL27A1-201ENST00000356083 Q9UF83 564 aa12.61□□□□□ -0.39
COL27A1-201ENST00000356083 IGLV8-61A0A075B6I0 122 aa12.6□□□□□ -0.39
COL27A1-201ENST00000356083 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
COL27A1-201ENST00000356083 MRGPRG-AS1Q2M3A8 158 aa12.6□□□□□ -0.39
COL27A1-201ENST00000356083 MTORP42345 2549 aa12.59□□□□□ -0.39
COL27A1-201ENST00000356083 TRBV30A0A0K0K1B3 111 aa12.58□□□□□ -0.39
COL27A1-201ENST00000356083 CRIP1P50238 77 aa12.58□□□□□ -0.39
COL27A1-201ENST00000356083 Q6ZTC4 211 aa12.58□□□□□ -0.39
COL27A1-201ENST00000356083 ZNF702PQ9H963 129 aa12.58□□□□□ -0.39
COL27A1-201ENST00000356083 FBXL19-AS1Q494R0 122 aa12.57□□□□□ -0.4
COL27A1-201ENST00000356083 hDV103S1A0JD37 113 aa12.57□□□□□ -0.4
COL27A1-201ENST00000356083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.55□□□□□ -0.4
COL27A1-201ENST00000356083 TSHBP01222 138 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 J3QL48 77 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 LINC00575Q6W349 94 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 POLQO75417 2590 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 KRTAP27-1Q3LI81 207 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 HCG22E2RYF7 251 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 TRBV10-3A0A0K0K1G6 114 aa12.55□□□□□ -0.4
COL27A1-201ENST00000356083 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
COL27A1-201ENST00000356083 PSMG3-AS1Q96PY0 264 aa12.54□□□□□ -0.4
COL27A1-201ENST00000356083 CCDC179H3BU77 68 aa12.54□□□□□ -0.4
COL27A1-201ENST00000356083 LINC00694P0DN24 101 aa12.54□□□□□ -0.4
COL27A1-201ENST00000356083 A0A087WSZ3 146 aa12.53□□□□□ -0.4
COL27A1-201ENST00000356083 MBD6Q96DN6 1003 aa12.52□□□□□ -0.4
COL27A1-201ENST00000356083 LTBP2Q14767 1821 aa12.52□□□□□ -0.41
COL27A1-201ENST00000356083 A8MTW9 85 aa12.52□□□□□ -0.41
COL27A1-201ENST00000356083 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
COL27A1-201ENST00000356083 SPINT4Q6UDR6 99 aa12.51□□□□□ -0.41
COL27A1-201ENST00000356083 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
COL27A1-201ENST00000356083 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
COL27A1-201ENST00000356083 TRBV7-7A0A0K0K1E9 115 aa12.49□□□□□ -0.41
COL27A1-201ENST00000356083 EDN2P20800 178 aa12.49□□□□□ -0.41
COL27A1-201ENST00000356083 Q8IZM0 81 aa12.48□□□□□ -0.41
COL27A1-201ENST00000356083 COX7CP15954 63 aa12.48□□□□□ -0.41
COL27A1-201ENST00000356083 UTRNP46939 3433 aa12.48□□□□□ -0.41
COL27A1-201ENST00000356083 ACYP2P14621 99 aa12.48□□□□□ -0.41
COL27A1-201ENST00000356083 SPAG11AQ6PDA7 123 aa12.47□□□□□ -0.41
COL27A1-201ENST00000356083 CDC42SE2Q9NRR3 84 aa12.47□□□□□ -0.41
COL27A1-201ENST00000356083 Q8N814 137 aa12.47□□□□□ -0.41
COL27A1-201ENST00000356083 CR1P17927 2039 aa12.46□□□□□ -0.41
COL27A1-201ENST00000356083 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.41
COL27A1-201ENST00000356083 TRAV7A0A075B6U4 112 aa12.45□□□□□ -0.42
COL27A1-201ENST00000356083 NRACQ8N912 160 aa12.45□□□□□ -0.42
COL27A1-201ENST00000356083 PRR9Q5T870 116 aa12.44□□□□□ -0.42
COL27A1-201ENST00000356083 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-201ENST00000356083 MOBPQ13875 183 aa12.44□□□□□ -0.42
COL27A1-201ENST00000356083 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
COL27A1-201ENST00000356083 A0A1B0GU69 56 aa12.44□□□□□ -0.42
COL27A1-201ENST00000356083 A0A087WYN8 130 aa12.43□□□□□ -0.42
COL27A1-201ENST00000356083 SMIM26A0A096LP01 95 aa12.43□□□□□ -0.42
COL27A1-201ENST00000356083 CHTF8P0CG12 524 aa12.43□□□□□ -0.42
COL27A1-201ENST00000356083 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
COL27A1-201ENST00000356083 LINC00242Q5T6M2 205 aa12.42□□□□□ -0.42
COL27A1-201ENST00000356083 A0A087WVE0 104 aa12.41□□□□□ -0.42
COL27A1-201ENST00000356083 PCSK5Q92824 1860 aa12.4□□□□□ -0.42
COL27A1-201ENST00000356083 FSTL3O95633 263 aa12.4□□□□□ -0.42
COL27A1-201ENST00000356083 Q8N3U1 123 aa12.4□□□□□ -0.42
COL27A1-201ENST00000356083 COX6B2Q6YFQ2 88 aa12.4□□□□□ -0.43
COL27A1-201ENST00000356083 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
COL27A1-201ENST00000356083 CDSNQ15517 529 aa12.39□□□□□ -0.43
COL27A1-201ENST00000356083 IMUPQ9GZP8 106 aa12.39□□□□□ -0.43
COL27A1-201ENST00000356083 EGFEM1PQ0D2K5 195 aa12.39□□□□□ -0.43
COL27A1-201ENST00000356083 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
COL27A1-201ENST00000356083 C16orf90A8MZG2 172 aa12.38□□□□□ -0.43
COL27A1-201ENST00000356083 KRTAP10-9P60411 292 aa12.37□□□□□ -0.43
COL27A1-201ENST00000356083 C11orf71Q6IPW1 123 aa12.37□□□□□ -0.43
COL27A1-201ENST00000356083 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
COL27A1-201ENST00000356083 Q6JHZ5 121 aa12.36□□□□□ -0.43
COL27A1-201ENST00000356083 TYMSOSQ8TAI1 123 aa12.34□□□□□ -0.43
COL27A1-201ENST00000356083 SMCR5Q8TEV8 140 aa12.32□□□□□ -0.44
COL27A1-201ENST00000356083 MDFIQ99750 246 aa12.32□□□□□ -0.44
COL27A1-201ENST00000356083 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
COL27A1-201ENST00000356083 KLLNB2CW77 178 aa12.3□□□□□ -0.44
COL27A1-201ENST00000356083 EP400Q96L91 3159 aa12.3□□□□□ -0.44
COL27A1-201ENST00000356083 C11orf21Q9P2W6 132 aa12.3□□□□□ -0.44
COL27A1-201ENST00000356083 AVPP01185 164 aa12.3□□□□□ -0.44
COL27A1-201ENST00000356083 Q6ZRU5 148 aa12.29□□□□□ -0.44
COL27A1-201ENST00000356083 FHL2Q14192 279 aa12.28□□□□□ -0.44
COL27A1-201ENST00000356083 SSBP3-AS1Q7Z2R9 100 aa12.28□□□□□ -0.44
COL27A1-201ENST00000356083 CEP350Q5VT06 3117 aa12.28□□□□□ -0.44
COL27A1-201ENST00000356083 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
COL27A1-201ENST00000356083 LINC00313P59037 77 aa12.28□□□□□ -0.44
COL27A1-201ENST00000356083 C22orf24Q9Y442 160 aa12.27□□□□□ -0.44
COL27A1-201ENST00000356083 BRWD1-AS2P59051 145 aa12.27□□□□□ -0.44
COL27A1-201ENST00000356083 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
COL27A1-201ENST00000356083 ANKRD11Q6UB99 2663 aaPredicted RBP12.26□□□□□ -0.45
COL27A1-201ENST00000356083 Q96NJ1 140 aa12.25□□□□□ -0.45
COL27A1-201ENST00000356083 SMIM1B2RUZ4 78 aa12.24□□□□□ -0.45
COL27A1-201ENST00000356083 POLR2KP53803 58 aaKnown RBP12.24□□□□□ -0.45
COL27A1-201ENST00000356083 ATP11AUNQ6ZP68 121 aa12.24□□□□□ -0.45
COL27A1-201ENST00000356083 IGLV1-40P01703 118 aa12.24□□□□□ -0.45
COL27A1-201ENST00000356083 C6orf48Q9UBA6 75 aa12.24□□□□□ -0.45
COL27A1-201ENST00000356083 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
COL27A1-201ENST00000356083 KIAA0087Q14695 138 aa12.23□□□□□ -0.45
COL27A1-201ENST00000356083 LINC00574Q9H8X3 128 aa12.23□□□□□ -0.45
COL27A1-201ENST00000356083 ZNF580Q9UK33 172 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms