RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KIAA0087Q14695 138 aa7.88□□□□□ -1.15
CAPN9-202ENST00000354537 CD164L2Q6UWJ8 174 aa7.88□□□□□ -1.15
CAPN9-202ENST00000354537 A0A087WVE0 104 aa7.87□□□□□ -1.15
CAPN9-202ENST00000354537 LOC107984640A0A0U1RRK4 108 aa7.87□□□□□ -1.15
CAPN9-202ENST00000354537 GYPEP15421 78 aa7.87□□□□□ -1.15
CAPN9-202ENST00000354537 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
CAPN9-202ENST00000354537 CFAP46Q8IYW2 2715 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 SMIM9A6NGZ8 99 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
CAPN9-202ENST00000354537 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 UBL5Q9BZL1 73 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 WFDC10AQ9H1F0 79 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 PRO0255Q9UI72 69 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 KRTAP10-9P60411 292 aa7.86□□□□□ -1.15
CAPN9-202ENST00000354537 LOC110117498A0A087WWA1 95 aa7.85□□□□□ -1.15
CAPN9-202ENST00000354537 FAM208BQ5VWN6 2430 aa7.85□□□□□ -1.15
CAPN9-202ENST00000354537 PLA2G2AP14555 144 aa7.85□□□□□ -1.15
CAPN9-202ENST00000354537 C5orf47Q569G3 176 aa7.85□□□□□ -1.15
CAPN9-202ENST00000354537 LINC00575Q6W349 94 aa7.85□□□□□ -1.15
CAPN9-202ENST00000354537 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
CAPN9-202ENST00000354537 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
CAPN9-202ENST00000354537 C11orf68Q9H3H3 251 aaKnown RBP7.84□□□□□ -1.15
CAPN9-202ENST00000354537 ESM1Q9NQ30 184 aa7.84□□□□□ -1.15
CAPN9-202ENST00000354537 RNASE1P07998 156 aaKnown RBP7.84□□□□□ -1.16
CAPN9-202ENST00000354537 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 DEFB130BP0DP73 79 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 DEFB130AP0DP74 79 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 PDE6GP18545 87 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 GHRHP01286 108 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 PRB1P04280 392 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 C6orf223Q8N319 242 aa7.83□□□□□ -1.16
CAPN9-202ENST00000354537 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
CAPN9-202ENST00000354537 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
CAPN9-202ENST00000354537 RBM3P98179 157 aaKnown RBP7.82□□□□□ -1.16
CAPN9-202ENST00000354537 CRYBG3Q68DQ2 2970 aa7.82□□□□□ -1.16
CAPN9-202ENST00000354537 CHCHD10Q8WYQ3 142 aaPredicted RBP7.82□□□□□ -1.16
CAPN9-202ENST00000354537 LYRM9A8MSI8 78 aa7.81□□□□□ -1.16
CAPN9-202ENST00000354537 PRR3P79522 188 aaKnown RBP7.81□□□□□ -1.16
CAPN9-202ENST00000354537 Q6ZQT0 140 aa7.81□□□□□ -1.16
CAPN9-202ENST00000354537 UTP20O75691 2785 aaKnown RBP7.81□□□□□ -1.16
CAPN9-202ENST00000354537 MXRA5Q9NR99 2828 aa7.81□□□□□ -1.16
CAPN9-202ENST00000354537 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
CAPN9-202ENST00000354537 BBC3Q96PG8 261 aaPredicted RBP7.81□□□□□ -1.16
CAPN9-202ENST00000354537 USP9XQ93008 2570 aaPredicted RBP7.81□□□□□ -1.16
CAPN9-202ENST00000354537 USP9YO00507 2555 aaPredicted RBP7.8□□□□□ -1.16
CAPN9-202ENST00000354537 MAP1AP78559 2803 aaPredicted RBP7.8□□□□□ -1.16
CAPN9-202ENST00000354537 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
CAPN9-202ENST00000354537 LINC00269Q8N2A0 174 aa7.8□□□□□ -1.16
CAPN9-202ENST00000354537 X6R8D5 127 aa7.8□□□□□ -1.16
CAPN9-202ENST00000354537 FLNCQ14315 2725 aa7.8□□□□□ -1.16
CAPN9-202ENST00000354537 A0A0J9YWU9 116 aa7.79□□□□□ -1.16
CAPN9-202ENST00000354537 IGHV4-30-4P0DP06 118 aa7.79□□□□□ -1.16
CAPN9-202ENST00000354537 HILS1P60008 231 aa7.79□□□□□ -1.16
CAPN9-202ENST00000354537 ZNF462Q96JM2 2506 aa7.79□□□□□ -1.16
CAPN9-202ENST00000354537 REG3AQ06141 175 aa7.79□□□□□ -1.16
CAPN9-202ENST00000354537 C9orf66Q5T8R8 295 aa7.79□□□□□ -1.16
CAPN9-202ENST00000354537 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
CAPN9-202ENST00000354537 FAM19A1Q7Z5A9 133 aa7.78□□□□□ -1.16
CAPN9-202ENST00000354537 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
CAPN9-202ENST00000354537 CSMD2Q7Z408 3487 aa7.77□□□□□ -1.16
CAPN9-202ENST00000354537 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
CAPN9-202ENST00000354537 CLPSL2Q6UWE3 100 aa7.77□□□□□ -1.17
CAPN9-202ENST00000354537 GVQW2A0A096LPI5 108 aaPredicted RBP7.77□□□□□ -1.17
CAPN9-202ENST00000354537 CXCL6P80162 114 aa7.77□□□□□ -1.17
CAPN9-202ENST00000354537 FASNP49327 2511 aaKnown RBP7.77□□□□□ -1.17
CAPN9-202ENST00000354537 MYO18BQ8IUG5 2567 aa7.76□□□□□ -1.17
CAPN9-202ENST00000354537 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
CAPN9-202ENST00000354537 ANGP03950 147 aaKnown RBP7.76□□□□□ -1.17
CAPN9-202ENST00000354537 Q8NDZ9 215 aa7.76□□□□□ -1.17
CAPN9-202ENST00000354537 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
CAPN9-202ENST00000354537 ZANQ9Y493 2812 aa7.75□□□□□ -1.17
CAPN9-202ENST00000354537 LAMTOR3Q9UHA4 124 aa7.75□□□□□ -1.17
CAPN9-202ENST00000354537 WIPF1O43516 503 aa7.75□□□□□ -1.17
CAPN9-202ENST00000354537 LINC01547P58512 204 aaPredicted RBP7.75□□□□□ -1.17
CAPN9-202ENST00000354537 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
CAPN9-202ENST00000354537 WFDC9Q8NEX5 89 aa7.75□□□□□ -1.17
CAPN9-202ENST00000354537 FBN2P35556 2912 aa7.74□□□□□ -1.17
CAPN9-202ENST00000354537 TRBV7-6A0A0J9YX20 115 aa7.74□□□□□ -1.17
CAPN9-202ENST00000354537 SPAG11BQ08648 103 aa7.74□□□□□ -1.17
CAPN9-202ENST00000354537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.74□□□□□ -1.17
CAPN9-202ENST00000354537 WFDC11Q8NEX6 87 aa7.74□□□□□ -1.17
CAPN9-202ENST00000354537 CENPEQ02224 2701 aa7.74□□□□□ -1.17
CAPN9-202ENST00000354537 MYO9AB2RTY4 2548 aa7.74□□□□□ -1.17
CAPN9-202ENST00000354537 OXTP01178 125 aa7.73□□□□□ -1.17
CAPN9-202ENST00000354537 Q6ZVQ6 151 aa7.73□□□□□ -1.17
CAPN9-202ENST00000354537 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
CAPN9-202ENST00000354537 KLKP1Q107X0 134 aa7.73□□□□□ -1.17
CAPN9-202ENST00000354537 GCN1Q92616 2671 aaKnown RBP7.72□□□□□ -1.17
CAPN9-202ENST00000354537 A0A096LPF7 62 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 LELP1Q5T871 98 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 UNQ6190/PRO20217Q6UXQ8 127 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 IGLV10-54A0A075B6I4 117 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 PRR34Q9NV39 138 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 HELZ2Q9BYK8 2649 aaKnown RBP7.72□□□□□ -1.17
CAPN9-202ENST00000354537 C2CD3Q4AC94 2353 aa7.72□□□□□ -1.17
CAPN9-202ENST00000354537 NOTCH3Q9UM47 2321 aa7.71□□□□□ -1.17
CAPN9-202ENST00000354537 CYSRT1A8MQ03 144 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms