RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 PLXNB3Q9ULL4 1909 aa9.59□□□□□ -0.87
LMBR1-201ENST00000353442 ACYP2P14621 99 aa9.59□□□□□ -0.87
LMBR1-201ENST00000353442 CCDC179H3BU77 68 aa9.59□□□□□ -0.87
LMBR1-201ENST00000353442 KLLNB2CW77 178 aa9.57□□□□□ -0.88
LMBR1-201ENST00000353442 HIVEP3Q5T1R4 2406 aa9.57□□□□□ -0.88
LMBR1-201ENST00000353442 TECTAO75443 2155 aa9.56□□□□□ -0.88
LMBR1-201ENST00000353442 SPINT4Q6UDR6 99 aa9.55□□□□□ -0.88
LMBR1-201ENST00000353442 Q96NJ1 140 aa9.55□□□□□ -0.88
LMBR1-201ENST00000353442 SPG11Q96JI7 2443 aa9.55□□□□□ -0.88
LMBR1-201ENST00000353442 A0A1B0GU69 56 aa9.55□□□□□ -0.88
LMBR1-201ENST00000353442 NOTCH2Q04721 2471 aa9.54□□□□□ -0.88
LMBR1-201ENST00000353442 ATP11AUNQ6ZP68 121 aa9.54□□□□□ -0.88
LMBR1-201ENST00000353442 LINC00574Q9H8X3 128 aa9.54□□□□□ -0.88
LMBR1-201ENST00000353442 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
LMBR1-201ENST00000353442 RTL8CO15255 209 aa9.54□□□□□ -0.88
LMBR1-201ENST00000353442 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
LMBR1-201ENST00000353442 Q8N6K4 173 aa9.53□□□□□ -0.88
LMBR1-201ENST00000353442 Q6ZPA2 131 aa9.53□□□□□ -0.88
LMBR1-201ENST00000353442 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
LMBR1-201ENST00000353442 Q6ZSN1 163 aa9.52□□□□□ -0.89
LMBR1-201ENST00000353442 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
LMBR1-201ENST00000353442 COX7CP15954 63 aa9.52□□□□□ -0.89
LMBR1-201ENST00000353442 C11orf1Q9H5F2 150 aa9.52□□□□□ -0.89
LMBR1-201ENST00000353442 RAI1Q7Z5J4 1906 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-201ENST00000353442 CHCHD7Q9BUK0 85 aa9.52□□□□□ -0.89
LMBR1-201ENST00000353442 Q8N3U1 123 aa9.51□□□□□ -0.89
LMBR1-201ENST00000353442 IMUPQ9GZP8 106 aa9.51□□□□□ -0.89
LMBR1-201ENST00000353442 ARHGAP32A7KAX9 2087 aa9.51□□□□□ -0.89
LMBR1-201ENST00000353442 C16orf95Q9H693 158 aa9.51□□□□□ -0.89
LMBR1-201ENST00000353442 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
LMBR1-201ENST00000353442 P0C879 139 aa9.51□□□□□ -0.89
LMBR1-201ENST00000353442 TRAV7A0A075B6U4 112 aa9.5□□□□□ -0.89
LMBR1-201ENST00000353442 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
LMBR1-201ENST00000353442 ATG2AQ2TAZ0 1938 aa9.49□□□□□ -0.89
LMBR1-201ENST00000353442 CUL9Q8IWT3 2517 aa9.49□□□□□ -0.89
LMBR1-201ENST00000353442 RPL37AP61513 92 aaKnown RBP9.49□□□□□ -0.89
LMBR1-201ENST00000353442 KIAA0087Q14695 138 aa9.48□□□□□ -0.89
LMBR1-201ENST00000353442 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
LMBR1-201ENST00000353442 LINC00313P59037 77 aa9.48□□□□□ -0.89
LMBR1-201ENST00000353442 TET2Q6N021 2002 aaPredicted RBP9.47□□□□□ -0.89
LMBR1-201ENST00000353442 APLNQ9ULZ1 77 aa9.47□□□□□ -0.89
LMBR1-201ENST00000353442 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
LMBR1-201ENST00000353442 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
LMBR1-201ENST00000353442 LINC00315P59091 139 aa9.46□□□□□ -0.89
LMBR1-201ENST00000353442 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
LMBR1-201ENST00000353442 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
LMBR1-201ENST00000353442 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
LMBR1-201ENST00000353442 SMIM29Q86T20 159 aa9.45□□□□□ -0.9
LMBR1-201ENST00000353442 Q8N2B8 174 aa9.45□□□□□ -0.9
LMBR1-201ENST00000353442 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
LMBR1-201ENST00000353442 NUP210LQ5VU65 1888 aa9.45□□□□□ -0.9
LMBR1-201ENST00000353442 CDIP1Q9H305 208 aa9.45□□□□□ -0.9
LMBR1-201ENST00000353442 SMR3BP02814 79 aaPredicted RBP9.44□□□□□ -0.9
LMBR1-201ENST00000353442 DOPEY1Q5JWR5 2465 aa9.44□□□□□ -0.9
LMBR1-201ENST00000353442 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
LMBR1-201ENST00000353442 C6orf48Q9UBA6 75 aa9.43□□□□□ -0.9
LMBR1-201ENST00000353442 LINC00167Q96N53 147 aa9.42□□□□□ -0.9
LMBR1-201ENST00000353442 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
LMBR1-201ENST00000353442 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 BDP1A6H8Y1 2624 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 KRTAP24-1Q3LI83 254 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 SSBP3-AS1Q7Z2R9 100 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 TMEM254Q8TBM7 123 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 ABCA2Q9BZC7 2435 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 Q6ZRP5 223 aa9.41□□□□□ -0.9
LMBR1-201ENST00000353442 PLXNB1O43157 2135 aa9.4□□□□□ -0.9
LMBR1-201ENST00000353442 COL4A4P53420 1690 aaPredicted RBP9.39□□□□□ -0.91
LMBR1-201ENST00000353442 C2orf91Q6ZV80 131 aa9.38□□□□□ -0.91
LMBR1-201ENST00000353442 PCDH15Q96QU1 1955 aa9.38□□□□□ -0.91
LMBR1-201ENST00000353442 HCFC1P51610 2035 aa9.38□□□□□ -0.91
LMBR1-201ENST00000353442 A0A1W2PPR1 153 aa9.38□□□□□ -0.91
LMBR1-201ENST00000353442 COL5A1P20908 1838 aaPredicted RBP9.38□□□□□ -0.91
LMBR1-201ENST00000353442 PCNX3Q9H6A9 2034 aa9.38□□□□□ -0.91
LMBR1-201ENST00000353442 CRIP3Q6Q6R5 217 aa9.37□□□□□ -0.91
LMBR1-201ENST00000353442 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
LMBR1-201ENST00000353442 NBDYA0A0U1RRE5 68 aa9.36□□□□□ -0.91
LMBR1-201ENST00000353442 AGRNO00468 2067 aa9.36□□□□□ -0.91
LMBR1-201ENST00000353442 CCDC168Q8NDH2 2452 aa9.36□□□□□ -0.91
LMBR1-201ENST00000353442 F8WDY8 70 aa9.35□□□□□ -0.91
LMBR1-201ENST00000353442 EPM2AB3EWF7 344 aa9.34□□□□□ -0.91
LMBR1-201ENST00000353442 KIAA1549LQ6ZVL6 1849 aa9.33□□□□□ -0.92
LMBR1-201ENST00000353442 IGLV6-57P01721 117 aa9.33□□□□□ -0.92
LMBR1-201ENST00000353442 KIF25-AS1Q9Y6Z4 181 aa9.32□□□□□ -0.92
LMBR1-201ENST00000353442 A0A1B0GUV1 79 aa9.32□□□□□ -0.92
LMBR1-201ENST00000353442 ST20-AS1Q8NBB2 130 aa9.32□□□□□ -0.92
LMBR1-201ENST00000353442 PRO3102Q9H379 93 aa9.32□□□□□ -0.92
LMBR1-201ENST00000353442 Q8NBF4 154 aa9.31□□□□□ -0.92
LMBR1-201ENST00000353442 FAM19A4Q96LR4 140 aa9.3□□□□□ -0.92
LMBR1-201ENST00000353442 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
LMBR1-201ENST00000353442 LINC00476Q8WZB0 136 aa9.28□□□□□ -0.92
LMBR1-201ENST00000353442 NAV3Q8IVL0 2385 aa9.27□□□□□ -0.93
LMBR1-201ENST00000353442 SPATA3Q8NHX4 192 aa9.27□□□□□ -0.93
LMBR1-201ENST00000353442 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
LMBR1-201ENST00000353442 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
LMBR1-201ENST00000353442 M0R2T5 61 aa9.26□□□□□ -0.93
LMBR1-201ENST00000353442 AMELXQ99217 191 aa9.26□□□□□ -0.93
LMBR1-201ENST00000353442 DSCR10P59022 87 aa9.25□□□□□ -0.93
LMBR1-201ENST00000353442 DNAH10OSP0CZ25 163 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms