RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 SMR3AQ99954 134 aa10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 PRO0628Q9UI54 55 aa10.73□□□□□ -0.69
TNFSF13-202ENST00000349228 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.69
TNFSF13-202ENST00000349228 INAFM2P0DMQ5 153 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 CXCL5P42830 114 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 XCL1P47992 114 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 NF1P21359 2839 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 SETXQ7Z333 2677 aaKnown RBP10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 PFN2P35080 140 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 RPS28P62857 69 aaKnown RBP10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 CD164L2Q6UWJ8 174 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 SMIM11BQ8TCY0 68 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 FAM218AQ96MZ4 157 aa10.7□□□□□ -0.7
TNFSF13-202ENST00000349228 A0A1B0GX51 115 aa10.69□□□□□ -0.7
TNFSF13-202ENST00000349228 COX17Q14061 63 aa10.69□□□□□ -0.7
TNFSF13-202ENST00000349228 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
TNFSF13-202ENST00000349228 MIFP14174 115 aa10.68□□□□□ -0.7
TNFSF13-202ENST00000349228 DAD1P61803 113 aa10.68□□□□□ -0.7
TNFSF13-202ENST00000349228 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
TNFSF13-202ENST00000349228 J3KT08 172 aa10.68□□□□□ -0.7
TNFSF13-202ENST00000349228 DNAL4O96015 105 aa10.68□□□□□ -0.7
TNFSF13-202ENST00000349228 MALP21145 153 aa10.68□□□□□ -0.7
TNFSF13-202ENST00000349228 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
TNFSF13-202ENST00000349228 TENM4Q6N022 2769 aa10.67□□□□□ -0.7
TNFSF13-202ENST00000349228 ATP5G1P05496 136 aa10.67□□□□□ -0.7
TNFSF13-202ENST00000349228 IGHV4-28A0A0C4DH34 117 aa10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 NDUFV3P56181 108 aaKnown RBP10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 DEFB135Q30KP9 77 aa10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 IMUPQ9GZP8 106 aa10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 ACANP16112 2415 aa10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 HIVEP2P31629 2446 aa10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 JMJD1CQ15652 2540 aa10.66□□□□□ -0.7
TNFSF13-202ENST00000349228 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.7
TNFSF13-202ENST00000349228 NDUFC2O95298 119 aa10.65□□□□□ -0.71
TNFSF13-202ENST00000349228 LINC00269Q8N2A0 174 aa10.65□□□□□ -0.71
TNFSF13-202ENST00000349228 MUC7Q8TAX7 377 aa10.65□□□□□ -0.71
TNFSF13-202ENST00000349228 C22orf24Q9Y442 160 aa10.65□□□□□ -0.71
TNFSF13-202ENST00000349228 C2CD3Q4AC94 2353 aa10.64□□□□□ -0.71
TNFSF13-202ENST00000349228 SPART-AS1P0CW21 52 aa10.64□□□□□ -0.71
TNFSF13-202ENST00000349228 C4orf26Q17RF5 130 aa10.64□□□□□ -0.71
TNFSF13-202ENST00000349228 A0A096LPF7 62 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 KIAA0087Q14695 138 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 LINC00643Q86TS7 51 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 INAFM1C9JVW0 142 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 REG3AQ06141 175 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 Q8NAQ8 132 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 MTORP42345 2549 aa10.63□□□□□ -0.71
TNFSF13-202ENST00000349228 ANK3Q12955 4377 aaKnown RBP10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 WFDC9Q8NEX5 89 aa10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 Q9HAA7 133 aa10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 CCDC179H3BU77 68 aa10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 LELP1Q5T871 98 aa10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 CLPSL2Q6UWE3 100 aa10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 SETD2Q9BYW2 2564 aaPredicted RBP10.62□□□□□ -0.71
TNFSF13-202ENST00000349228 NBPF19A0A087WUL8 3843 aa10.61□□□□□ -0.71
TNFSF13-202ENST00000349228 A0A087WYN8 130 aa10.61□□□□□ -0.71
TNFSF13-202ENST00000349228 SPATA3Q8NHX4 192 aa10.6□□□□□ -0.71
TNFSF13-202ENST00000349228 KLK5Q9Y337 293 aaPredicted RBP10.6□□□□□ -0.71
TNFSF13-202ENST00000349228 UNC79Q9P2D8 2635 aa10.6□□□□□ -0.71
TNFSF13-202ENST00000349228 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
TNFSF13-202ENST00000349228 DEFB4AO15263 64 aa10.58□□□□□ -0.72
TNFSF13-202ENST00000349228 LECT2O14960 151 aa10.58□□□□□ -0.72
TNFSF13-202ENST00000349228 LINC00167Q96N53 147 aa10.57□□□□□ -0.72
TNFSF13-202ENST00000349228 ORMDL1Q9P0S3 153 aa10.57□□□□□ -0.72
TNFSF13-202ENST00000349228 CELA1Q9UNI1 258 aa10.57□□□□□ -0.72
TNFSF13-202ENST00000349228 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
TNFSF13-202ENST00000349228 FAM19A1Q7Z5A9 133 aa10.56□□□□□ -0.72
TNFSF13-202ENST00000349228 CUBNO60494 3623 aa10.56□□□□□ -0.72
TNFSF13-202ENST00000349228 NIPBLQ6KC79 2804 aaeCLIP10.55□□□□□ -0.72
TNFSF13-202ENST00000349228 LOC107984640A0A0U1RRK4 108 aa10.55□□□□□ -0.72
TNFSF13-202ENST00000349228 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
TNFSF13-202ENST00000349228 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
TNFSF13-202ENST00000349228 HELZ2Q9BYK8 2649 aaKnown RBP10.54□□□□□ -0.72
TNFSF13-202ENST00000349228 IGLV10-54A0A075B6I4 117 aa10.54□□□□□ -0.72
TNFSF13-202ENST00000349228 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
TNFSF13-202ENST00000349228 RETNQ9HD89 108 aa10.54□□□□□ -0.72
TNFSF13-202ENST00000349228 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
TNFSF13-202ENST00000349228 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
TNFSF13-202ENST00000349228 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
TNFSF13-202ENST00000349228 SPAG11BQ08648 103 aa10.52□□□□□ -0.73
TNFSF13-202ENST00000349228 C1orf195Q5TG92 126 aa10.52□□□□□ -0.73
TNFSF13-202ENST00000349228 H3BNG1 76 aa10.51□□□□□ -0.73
TNFSF13-202ENST00000349228 GVQW2A0A096LPI5 108 aaPredicted RBP10.51□□□□□ -0.73
TNFSF13-202ENST00000349228 JMJD7-PLA2G4BH0Y9G9 81 aa10.51□□□□□ -0.73
TNFSF13-202ENST00000349228 HTN3P15516 51 aa10.51□□□□□ -0.73
TNFSF13-202ENST00000349228 Q8N814 137 aa10.51□□□□□ -0.73
TNFSF13-202ENST00000349228 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
TNFSF13-202ENST00000349228 Q8N3U1 123 aa10.5□□□□□ -0.73
TNFSF13-202ENST00000349228 LYPD5Q6UWN5 251 aa10.49□□□□□ -0.73
TNFSF13-202ENST00000349228 C14orf132Q9NPU4 83 aa10.49□□□□□ -0.73
TNFSF13-202ENST00000349228 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
TNFSF13-202ENST00000349228 GCN1Q92616 2671 aaKnown RBP10.49□□□□□ -0.73
TNFSF13-202ENST00000349228 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
TNFSF13-202ENST00000349228 PRR3P79522 188 aaKnown RBP10.48□□□□□ -0.73
TNFSF13-202ENST00000349228 C9orf116Q5BN46 136 aaPredicted RBP10.48□□□□□ -0.73
TNFSF13-202ENST00000349228 S100A7L2Q5SY68 101 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms