RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 C9orf116Q5BN46 136 aaPredicted RBP12.33□□□□□ -0.44
CLTA-202ENST00000345519 C2orf82Q6UX34 121 aa12.33□□□□□ -0.44
CLTA-202ENST00000345519 GEMIN7Q9H840 131 aaKnown RBP12.33□□□□□ -0.44
CLTA-202ENST00000345519 NDUFC2-KCTD14E9PQ53 114 aa12.31□□□□□ -0.44
CLTA-202ENST00000345519 HBDP02042 147 aa12.31□□□□□ -0.44
CLTA-202ENST00000345519 PDZD11Q5EBL8 140 aa12.31□□□□□ -0.44
CLTA-202ENST00000345519 J3QL48 77 aa12.3□□□□□ -0.44
CLTA-202ENST00000345519 IGLC3P0DOY3 106 aa12.29□□□□□ -0.44
CLTA-202ENST00000345519 CXCL5P42830 114 aa12.29□□□□□ -0.44
CLTA-202ENST00000345519 RAB5BP61020 215 aa12.29□□□□□ -0.44
CLTA-202ENST00000345519 CBLN2Q8IUK8 224 aa12.29□□□□□ -0.44
CLTA-202ENST00000345519 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
CLTA-202ENST00000345519 PRSS2P07478 247 aa12.28□□□□□ -0.44
CLTA-202ENST00000345519 ODF1Q14990 250 aa12.28□□□□□ -0.44
CLTA-202ENST00000345519 KRTAP7-1Q8IUC3 87 aa12.28□□□□□ -0.44
CLTA-202ENST00000345519 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
CLTA-202ENST00000345519 F8VRH5 84 aa12.27□□□□□ -0.45
CLTA-202ENST00000345519 C6orf226Q5I0X4 101 aa12.27□□□□□ -0.45
CLTA-202ENST00000345519 CKS1BP61024 79 aa12.26□□□□□ -0.45
CLTA-202ENST00000345519 SLC7A5P1Q8MH63 180 aa12.26□□□□□ -0.45
CLTA-202ENST00000345519 CHCHD1Q96BP2 118 aaKnown RBP12.26□□□□□ -0.45
CLTA-202ENST00000345519 TOMM7Q9P0U1 55 aa12.26□□□□□ -0.45
CLTA-202ENST00000345519 SRSF9Q13242 221 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLTA-202ENST00000345519 C9orf129Q5T035 196 aaKnown RBP12.25□□□□□ -0.45
CLTA-202ENST00000345519 IGLV5-39A0A0G2JS06 123 aa12.24□□□□□ -0.45
CLTA-202ENST00000345519 FAM168BA1KXE4 195 aa12.24□□□□□ -0.45
CLTA-202ENST00000345519 ATP5LO75964 103 aa12.24□□□□□ -0.45
CLTA-202ENST00000345519 MT1HL1P0DM35 61 aa12.24□□□□□ -0.45
CLTA-202ENST00000345519 PMCHL1Q16048 86 aa12.24□□□□□ -0.45
CLTA-202ENST00000345519 HMCN2Q8NDA2 5059 aa12.24□□□□□ -0.45
CLTA-202ENST00000345519 PHF5AQ7RTV0 110 aaKnown RBP12.23□□□□□ -0.45
CLTA-202ENST00000345519 GAGE2EQ4V326 116 aa12.22□□□□□ -0.45
CLTA-202ENST00000345519 SPINK6Q6UWN8 80 aa12.22□□□□□ -0.45
CLTA-202ENST00000345519 COX7B2Q8TF08 81 aa12.22□□□□□ -0.45
CLTA-202ENST00000345519 GAGE2DQ9UEU5 116 aa12.22□□□□□ -0.45
CLTA-202ENST00000345519 PSORS1C2Q9UIG4 136 aa12.22□□□□□ -0.45
CLTA-202ENST00000345519 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
CLTA-202ENST00000345519 H3BRM9 83 aa12.2□□□□□ -0.46
CLTA-202ENST00000345519 SPINK8P0C7L1 97 aa12.2□□□□□ -0.46
CLTA-202ENST00000345519 FAM19A5Q7Z5A7 132 aaPredicted RBP12.18□□□□□ -0.46
CLTA-202ENST00000345519 TRAV12-1A0A0B4J245 112 aa12.17□□□□□ -0.46
CLTA-202ENST00000345519 TRGC2P03986 189 aa12.17□□□□□ -0.46
CLTA-202ENST00000345519 KRTAP11-1Q8IUC1 163 aa12.17□□□□□ -0.46
CLTA-202ENST00000345519 LINC01600Q96MT4 127 aa12.17□□□□□ -0.46
CLTA-202ENST00000345519 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
CLTA-202ENST00000345519 COLCA2A8K830 154 aa12.16□□□□□ -0.46
CLTA-202ENST00000345519 M0QXV9 152 aa12.16□□□□□ -0.46
CLTA-202ENST00000345519 LINC00310P59036 64 aa12.16□□□□□ -0.46
CLTA-202ENST00000345519 BAGE3Q86Y29 109 aa12.15□□□□□ -0.46
CLTA-202ENST00000345519 IFI27L1Q96BM0 104 aa12.14□□□□□ -0.47
CLTA-202ENST00000345519 TP73-AS1Q9UF72 201 aa12.14□□□□□ -0.47
CLTA-202ENST00000345519 NDUFA6P56556 154 aa12.13□□□□□ -0.47
CLTA-202ENST00000345519 SERTAD4-AS1Q5TG53 156 aa12.13□□□□□ -0.47
CLTA-202ENST00000345519 PLA2G2DQ9UNK4 145 aa12.13□□□□□ -0.47
CLTA-202ENST00000345519 XAGE1AQ9HD64 81 aa12.12□□□□□ -0.47
CLTA-202ENST00000345519 HSBP1O75506 76 aa12.11□□□□□ -0.47
CLTA-202ENST00000345519 IGLV7-43P04211 117 aa12.11□□□□□ -0.47
CLTA-202ENST00000345519 C1orf137Q5JT78 98 aa12.11□□□□□ -0.47
CLTA-202ENST00000345519 CHTOPQ9Y3Y2 248 aaKnown RBP12.11□□□□□ -0.47
CLTA-202ENST00000345519 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
CLTA-202ENST00000345519 REG3GQ6UW15 175 aa12.1□□□□□ -0.47
CLTA-202ENST00000345519 IGLV5-37A0A075B6J1 123 aa12.09□□□□□ -0.47
CLTA-202ENST00000345519 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
CLTA-202ENST00000345519 ZNF625Q96I27 306 aaPredicted RBP12.09□□□□□ -0.47
CLTA-202ENST00000345519 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
CLTA-202ENST00000345519 SERF1AO75920 110 aa12.08□□□□□ -0.48
CLTA-202ENST00000345519 COX17Q14061 63 aa12.08□□□□□ -0.48
CLTA-202ENST00000345519 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
CLTA-202ENST00000345519 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
CLTA-202ENST00000345519 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
CLTA-202ENST00000345519 MRPL55Q7Z7F7 128 aaKnown RBP12.05□□□□□ -0.48
CLTA-202ENST00000345519 ERG28Q9UKR5 140 aa12.05□□□□□ -0.48
CLTA-202ENST00000345519 NUPR1O60356 82 aa12.04□□□□□ -0.48
CLTA-202ENST00000345519 LEPROTL1O95214 131 aa12.04□□□□□ -0.48
CLTA-202ENST00000345519 UBE2BP63146 152 aa12.04□□□□□ -0.48
CLTA-202ENST00000345519 LBHQ53QV2 105 aaPredicted RBP12.04□□□□□ -0.48
CLTA-202ENST00000345519 H0Y9J4 135 aa12.02□□□□□ -0.49
CLTA-202ENST00000345519 DIRC1Q969H9 104 aa12.02□□□□□ -0.49
CLTA-202ENST00000345519 LINC00167Q96N53 147 aa11.99□□□□□ -0.49
CLTA-202ENST00000345519 SND1-IT1Q9HBX3 110 aa11.99□□□□□ -0.49
CLTA-202ENST00000345519 SCO1O75880 301 aa11.98□□□□□ -0.49
CLTA-202ENST00000345519 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
CLTA-202ENST00000345519 VPREB1P12018 145 aa11.98□□□□□ -0.49
CLTA-202ENST00000345519 PFN2P35080 140 aa11.98□□□□□ -0.49
CLTA-202ENST00000345519 HSPB8Q9UJY1 196 aa11.98□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BKO60814 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BJP06899 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BOP23527 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BBP33778 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BDP58876 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BCP62807 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST2H2BEQ16778 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BHQ93079 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BNQ99877 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 HIST1H2BMQ99879 126 aa11.97□□□□□ -0.49
CLTA-202ENST00000345519 ZNF861PO60384 105 aa11.96□□□□□ -0.49
CLTA-202ENST00000345519 PLNP26678 52 aa11.96□□□□□ -0.49
CLTA-202ENST00000345519 BCE1O60756 84 aa11.94□□□□□ -0.5
CLTA-202ENST00000345519 Q8NDZ9 215 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms