RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 C9orf116Q5BN46 136 aaPredicted RBP10.99□□□□□ -0.65
PTPRU-201ENST00000345512 FAM218AQ96MZ4 157 aa10.99□□□□□ -0.65
PTPRU-201ENST00000345512 Q6JHZ5 121 aa10.99□□□□□ -0.65
PTPRU-201ENST00000345512 COX7BP24311 80 aa10.99□□□□□ -0.65
PTPRU-201ENST00000345512 F8WEM9 126 aa10.98□□□□□ -0.65
PTPRU-201ENST00000345512 ATP5EP2Q5VTU8 51 aa10.98□□□□□ -0.65
PTPRU-201ENST00000345512 IGLV1-51P01701 117 aa10.98□□□□□ -0.65
PTPRU-201ENST00000345512 Q6ZQY7 126 aa10.98□□□□□ -0.65
PTPRU-201ENST00000345512 DMXL2Q8TDJ6 3036 aa10.98□□□□□ -0.65
PTPRU-201ENST00000345512 ZNF843Q8N446 348 aa10.98□□□□□ -0.65
PTPRU-201ENST00000345512 PDE6GP18545 87 aa10.97□□□□□ -0.65
PTPRU-201ENST00000345512 NREPQ16612 68 aa10.97□□□□□ -0.65
PTPRU-201ENST00000345512 SCXQ7RTU7 201 aa10.97□□□□□ -0.65
PTPRU-201ENST00000345512 IGHV4-28A0A0C4DH34 117 aa10.96□□□□□ -0.65
PTPRU-201ENST00000345512 LINC00846Q9NV44 126 aa10.96□□□□□ -0.65
PTPRU-201ENST00000345512 KLK5Q9Y337 293 aaPredicted RBP10.96□□□□□ -0.65
PTPRU-201ENST00000345512 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.66
PTPRU-201ENST00000345512 H3BQ85 93 aa10.96□□□□□ -0.66
PTPRU-201ENST00000345512 CFAP47Q6ZTR5 3102 aa10.95□□□□□ -0.66
PTPRU-201ENST00000345512 CCKP06307 115 aa10.95□□□□□ -0.66
PTPRU-201ENST00000345512 Q8N814 137 aa10.95□□□□□ -0.66
PTPRU-201ENST00000345512 UNQ6190/PRO20217Q6UXQ8 127 aa10.94□□□□□ -0.66
PTPRU-201ENST00000345512 LRBAP50851 2863 aa10.92□□□□□ -0.66
PTPRU-201ENST00000345512 COX17Q14061 63 aa10.92□□□□□ -0.66
PTPRU-201ENST00000345512 DEFB121Q5J5C9 76 aa10.92□□□□□ -0.66
PTPRU-201ENST00000345512 FUSP35637 526 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPRU-201ENST00000345512 WDFY3Q8IZQ1 3526 aa10.92□□□□□ -0.66
PTPRU-201ENST00000345512 TMEM258P61165 79 aa10.92□□□□□ -0.66
PTPRU-201ENST00000345512 ETDCA0A1B0GVM5 59 aa10.91□□□□□ -0.66
PTPRU-201ENST00000345512 CYSRT1A8MQ03 144 aa10.91□□□□□ -0.66
PTPRU-201ENST00000345512 NHLRC4P0CG21 123 aaPredicted RBP10.91□□□□□ -0.66
PTPRU-201ENST00000345512 KIR2DL5BQ8NHK3 375 aa10.91□□□□□ -0.66
PTPRU-201ENST00000345512 ATMQ13315 3056 aa10.9□□□□□ -0.67
PTPRU-201ENST00000345512 PSCAO43653 123 aa10.89□□□□□ -0.67
PTPRU-201ENST00000345512 UBE2BP63146 152 aa10.88□□□□□ -0.67
PTPRU-201ENST00000345512 HILS1P60008 231 aa10.88□□□□□ -0.67
PTPRU-201ENST00000345512 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
PTPRU-201ENST00000345512 FAM236DA0A1B0GTK5 79 aa10.87□□□□□ -0.67
PTPRU-201ENST00000345512 FAM236CP0DP71 79 aa10.87□□□□□ -0.67
PTPRU-201ENST00000345512 MIFP14174 115 aa10.87□□□□□ -0.67
PTPRU-201ENST00000345512 FAM110AQ9BQ89 295 aa10.87□□□□□ -0.67
PTPRU-201ENST00000345512 A8MTW9 85 aa10.87□□□□□ -0.67
PTPRU-201ENST00000345512 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
PTPRU-201ENST00000345512 IGKV2D-28P01615 120 aa10.86□□□□□ -0.67
PTPRU-201ENST00000345512 LELP1Q5T871 98 aa10.86□□□□□ -0.67
PTPRU-201ENST00000345512 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
PTPRU-201ENST00000345512 LOC107984640A0A0U1RRK4 108 aa10.85□□□□□ -0.67
PTPRU-201ENST00000345512 NDUFC2O95298 119 aa10.85□□□□□ -0.67
PTPRU-201ENST00000345512 C6orf223Q8N319 242 aa10.85□□□□□ -0.67
PTPRU-201ENST00000345512 SNURFQ9Y675 71 aa10.85□□□□□ -0.67
PTPRU-201ENST00000345512 SMCR5Q8TEV8 140 aa10.84□□□□□ -0.67
PTPRU-201ENST00000345512 BPY2O14599 106 aa10.84□□□□□ -0.67
PTPRU-201ENST00000345512 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
PTPRU-201ENST00000345512 ZNF73O43830 326 aaPredicted RBP10.84□□□□□ -0.67
PTPRU-201ENST00000345512 TRBV10-3A0A0K0K1G6 114 aa10.83□□□□□ -0.68
PTPRU-201ENST00000345512 FSHBP01225 129 aa10.83□□□□□ -0.68
PTPRU-201ENST00000345512 FASNP49327 2511 aaKnown RBP10.82□□□□□ -0.68
PTPRU-201ENST00000345512 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
PTPRU-201ENST00000345512 RMI2Q96E14 147 aa10.82□□□□□ -0.68
PTPRU-201ENST00000345512 SMR3AQ99954 134 aa10.82□□□□□ -0.68
PTPRU-201ENST00000345512 INAFM1C9JVW0 142 aa10.81□□□□□ -0.68
PTPRU-201ENST00000345512 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
PTPRU-201ENST00000345512 C3orf84H3BNL1 204 aa10.8□□□□□ -0.68
PTPRU-201ENST00000345512 C5orf47Q569G3 176 aa10.8□□□□□ -0.68
PTPRU-201ENST00000345512 DMXL1Q9Y485 3027 aa10.79□□□□□ -0.68
PTPRU-201ENST00000345512 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
PTPRU-201ENST00000345512 FLNAP21333 2647 aaKnown RBP10.79□□□□□ -0.68
PTPRU-201ENST00000345512 LINC00575Q6W349 94 aa10.79□□□□□ -0.68
PTPRU-201ENST00000345512 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
PTPRU-201ENST00000345512 C16orf95Q9H693 158 aa10.78□□□□□ -0.68
PTPRU-201ENST00000345512 KPRPQ5T749 579 aaPredicted RBP10.78□□□□□ -0.68
PTPRU-201ENST00000345512 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.78□□□□□ -0.68
PTPRU-201ENST00000345512 MUC7Q8TAX7 377 aa10.78□□□□□ -0.68
PTPRU-201ENST00000345512 M0R378 163 aa10.78□□□□□ -0.68
PTPRU-201ENST00000345512 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
PTPRU-201ENST00000345512 SVIPQ8NHG7 77 aa10.77□□□□□ -0.68
PTPRU-201ENST00000345512 SYCNQ0VAF6 134 aa10.77□□□□□ -0.69
PTPRU-201ENST00000345512 ZZEF1O43149 2961 aa10.76□□□□□ -0.69
PTPRU-201ENST00000345512 FAM19A3Q7Z5A8 133 aa10.76□□□□□ -0.69
PTPRU-201ENST00000345512 LY6G6DO95868 133 aa10.75□□□□□ -0.69
PTPRU-201ENST00000345512 LINC01561Q8N1V8 128 aa10.75□□□□□ -0.69
PTPRU-201ENST00000345512 CRYGAP11844 174 aa10.75□□□□□ -0.69
PTPRU-201ENST00000345512 A0A096LNT2 108 aa10.74□□□□□ -0.69
PTPRU-201ENST00000345512 PRB2P02812 416 aaPredicted RBP10.74□□□□□ -0.69
PTPRU-201ENST00000345512 TRAV7A0A075B6U4 112 aa10.74□□□□□ -0.69
PTPRU-201ENST00000345512 DEFB131BA0A096LNP1 70 aa10.74□□□□□ -0.69
PTPRU-201ENST00000345512 Q8N3U1 123 aa10.74□□□□□ -0.69
PTPRU-201ENST00000345512 IGHV4-30-4P0DP06 118 aa10.74□□□□□ -0.69
PTPRU-201ENST00000345512 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
PTPRU-201ENST00000345512 Q6ZVQ6 151 aa10.73□□□□□ -0.69
PTPRU-201ENST00000345512 C10orf25Q5T742 122 aa10.71□□□□□ -0.69
PTPRU-201ENST00000345512 ITPR3Q14573 2671 aa10.71□□□□□ -0.7
PTPRU-201ENST00000345512 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
PTPRU-201ENST00000345512 HRCT1Q6UXD1 115 aa10.7□□□□□ -0.7
PTPRU-201ENST00000345512 IL17DQ8TAD2 202 aa10.7□□□□□ -0.7
PTPRU-201ENST00000345512 EGFEM1PQ0D2K5 195 aa10.7□□□□□ -0.7
PTPRU-201ENST00000345512 GIG44P09565 113 aaPredicted RBP10.69□□□□□ -0.7
PTPRU-201ENST00000345512 X6R8D5 127 aa10.69□□□□□ -0.7
PTPRU-201ENST00000345512 COL12A1Q99715 3063 aa10.69□□□□□ -0.7
PTPRU-201ENST00000345512 RPL37AP8A6NKH3 93 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms