RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 PRSS2P07478 247 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 CHAC1Q9BUX1 264 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 UQCR10Q9UDW1 63 aa13.39□□□□□ -0.27
SMARCB1-202ENST00000344921 COL5A1-AS1Q5SY13 56 aa13.38□□□□□ -0.27
SMARCB1-202ENST00000344921 PAM16Q9Y3D7 125 aa13.38□□□□□ -0.27
SMARCB1-202ENST00000344921 NDUFA1O15239 70 aa13.37□□□□□ -0.27
SMARCB1-202ENST00000344921 DPH3Q96FX2 82 aa13.37□□□□□ -0.27
SMARCB1-202ENST00000344921 IGLC3P0DOY3 106 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 CHTOPQ9Y3Y2 248 aaKnown RBP13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 F8WDY8 70 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 H0Y8G0 127 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 H3BRM9 83 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 KRTDAPP60985 99 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 C6orf226Q5I0X4 101 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 HSPB8Q9UJY1 196 aa13.36□□□□□ -0.27
SMARCB1-202ENST00000344921 IGLV5-45A0A087WSX0 123 aa13.35□□□□□ -0.27
SMARCB1-202ENST00000344921 KIAA0087Q14695 138 aa13.35□□□□□ -0.27
SMARCB1-202ENST00000344921 PKIGQ9Y2B9 76 aa13.35□□□□□ -0.27
SMARCB1-202ENST00000344921 RYR1P21817 5038 aa13.34□□□□□ -0.27
SMARCB1-202ENST00000344921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.34□□□□□ -0.27
SMARCB1-202ENST00000344921 TRAV12-1A0A0B4J245 112 aa13.33□□□□□ -0.27
SMARCB1-202ENST00000344921 SPINK8P0C7L1 97 aa13.33□□□□□ -0.27
SMARCB1-202ENST00000344921 SPATA45Q537H7 98 aa13.33□□□□□ -0.27
SMARCB1-202ENST00000344921 UNQ6190/PRO20217Q6UXQ8 127 aa13.33□□□□□ -0.27
SMARCB1-202ENST00000344921 SCXQ7RTU7 201 aa13.33□□□□□ -0.27
SMARCB1-202ENST00000344921 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
SMARCB1-202ENST00000344921 SMIM1B2RUZ4 78 aa13.33□□□□□ -0.28
SMARCB1-202ENST00000344921 CHTF8P0CG12 524 aa13.33□□□□□ -0.28
SMARCB1-202ENST00000344921 CKS1BP61024 79 aa13.33□□□□□ -0.28
SMARCB1-202ENST00000344921 Q8IZM0 81 aa13.33□□□□□ -0.28
SMARCB1-202ENST00000344921 HSPG2P98160 4391 aa13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 SMR3BP02814 79 aaPredicted RBP13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 TMEM170BQ5T4T1 132 aa13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 C10orf25Q5T742 122 aa13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 DNAH8Q96JB1 4490 aa13.32□□□□□ -0.28
SMARCB1-202ENST00000344921 C11orf86A6NJI1 115 aa13.31□□□□□ -0.28
SMARCB1-202ENST00000344921 PANO1I0J062 215 aa13.31□□□□□ -0.28
SMARCB1-202ENST00000344921 C3orf79P0CE67 100 aa13.31□□□□□ -0.28
SMARCB1-202ENST00000344921 ZNF22P17026 224 aaPredicted RBP13.31□□□□□ -0.28
SMARCB1-202ENST00000344921 CIRBP-AS1Q8TBR5 109 aa13.31□□□□□ -0.28
SMARCB1-202ENST00000344921 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
SMARCB1-202ENST00000344921 F8VRH5 84 aa13.3□□□□□ -0.28
SMARCB1-202ENST00000344921 RNF151Q2KHN1 245 aa13.3□□□□□ -0.28
SMARCB1-202ENST00000344921 A0A096LNI7 61 aa13.29□□□□□ -0.28
SMARCB1-202ENST00000344921 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
SMARCB1-202ENST00000344921 GAGE2BQ13066 116 aa13.29□□□□□ -0.28
SMARCB1-202ENST00000344921 MAJINQ3KP22 176 aa13.29□□□□□ -0.28
SMARCB1-202ENST00000344921 COX7B2Q8TF08 81 aa13.29□□□□□ -0.28
SMARCB1-202ENST00000344921 HNRNPA3P51991 378 aaKnown RBP13.28□□□□□ -0.28
SMARCB1-202ENST00000344921 C6orf48Q9UBA6 75 aa13.28□□□□□ -0.28
SMARCB1-202ENST00000344921 Q8N1X5 172 aa13.27□□□□□ -0.28
SMARCB1-202ENST00000344921 SPACA4Q8TDM5 124 aa13.27□□□□□ -0.28
SMARCB1-202ENST00000344921 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.28
SMARCB1-202ENST00000344921 LINC00474Q9P2X8 69 aa13.27□□□□□ -0.28
SMARCB1-202ENST00000344921 HERC2O95714 4834 aa13.27□□□□□ -0.28
SMARCB1-202ENST00000344921 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.29
SMARCB1-202ENST00000344921 CIRBPQ14011 172 aaKnown RBP13.26□□□□□ -0.29
SMARCB1-202ENST00000344921 CXCL5P42830 114 aa13.25□□□□□ -0.29
SMARCB1-202ENST00000344921 ODF1Q14990 250 aa13.25□□□□□ -0.29
SMARCB1-202ENST00000344921 A0A087WYN8 130 aa13.25□□□□□ -0.29
SMARCB1-202ENST00000344921 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
SMARCB1-202ENST00000344921 C9orf116Q5BN46 136 aaPredicted RBP13.23□□□□□ -0.29
SMARCB1-202ENST00000344921 STPG4Q8N801 248 aa13.23□□□□□ -0.29
SMARCB1-202ENST00000344921 FAM229AH3BQW9 127 aa13.22□□□□□ -0.29
SMARCB1-202ENST00000344921 KRTAP17-1Q9BYP8 105 aa13.22□□□□□ -0.29
SMARCB1-202ENST00000344921 CBY1Q9Y3M2 126 aa13.22□□□□□ -0.29
SMARCB1-202ENST00000344921 IGLV5-39A0A0G2JS06 123 aa13.22□□□□□ -0.29
SMARCB1-202ENST00000344921 EPM2AB3EWF7 344 aa13.22□□□□□ -0.29
SMARCB1-202ENST00000344921 BATFQ16520 125 aa13.21□□□□□ -0.3
SMARCB1-202ENST00000344921 GAGE2EQ4V326 116 aa13.21□□□□□ -0.3
SMARCB1-202ENST00000344921 PMCHL2Q9BQD1 86 aa13.21□□□□□ -0.3
SMARCB1-202ENST00000344921 GAGE2DQ9UEU5 116 aa13.21□□□□□ -0.3
SMARCB1-202ENST00000344921 TLX1NBP0CAT3 122 aa13.2□□□□□ -0.3
SMARCB1-202ENST00000344921 PLNP26678 52 aa13.2□□□□□ -0.3
SMARCB1-202ENST00000344921 Q5VSD8 79 aa13.2□□□□□ -0.3
SMARCB1-202ENST00000344921 Q6ZRP5 223 aa13.2□□□□□ -0.3
SMARCB1-202ENST00000344921 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
SMARCB1-202ENST00000344921 TMEM223A0PJW6 202 aa13.19□□□□□ -0.3
SMARCB1-202ENST00000344921 NDUFC2-KCTD14E9PQ53 114 aa13.19□□□□□ -0.3
SMARCB1-202ENST00000344921 DPM2O94777 84 aa13.19□□□□□ -0.3
SMARCB1-202ENST00000344921 PLAC8Q9NZF1 115 aa13.19□□□□□ -0.3
SMARCB1-202ENST00000344921 SYS1-DBNDD2H3BUS1 97 aa13.18□□□□□ -0.3
SMARCB1-202ENST00000344921 IGKCP01834 107 aa13.17□□□□□ -0.3
SMARCB1-202ENST00000344921 PET117Q6UWS5 81 aa13.16□□□□□ -0.3
SMARCB1-202ENST00000344921 KRTAP4-5Q9BYR2 181 aa13.16□□□□□ -0.3
SMARCB1-202ENST00000344921 FAT1Q14517 4588 aa13.14□□□□□ -0.31
SMARCB1-202ENST00000344921 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
SMARCB1-202ENST00000344921 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
SMARCB1-202ENST00000344921 A0A1W2PNN7 141 aa13.12□□□□□ -0.31
SMARCB1-202ENST00000344921 HERVK_113P61574 105 aa13.12□□□□□ -0.31
SMARCB1-202ENST00000344921 UBE2V1Q13404 147 aa13.12□□□□□ -0.31
SMARCB1-202ENST00000344921 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
SMARCB1-202ENST00000344921 ZNF625Q96I27 306 aaPredicted RBP13.12□□□□□ -0.31
SMARCB1-202ENST00000344921 C7orf33Q8WU49 177 aa13.11□□□□□ -0.31
SMARCB1-202ENST00000344921 PFN2P35080 140 aa13.1□□□□□ -0.31
SMARCB1-202ENST00000344921 ATOH7Q8N100 152 aa13.1□□□□□ -0.31
SMARCB1-202ENST00000344921 LINC01545Q5VT33 79 aa13.1□□□□□ -0.31
SMARCB1-202ENST00000344921 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms