RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
CEACAM1-202ENST00000344391 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
CEACAM1-202ENST00000344391 C6orf223Q8N319 242 aa10.79□□□□□ -0.68
CEACAM1-202ENST00000344391 LINC00526Q96FQ7 95 aa10.79□□□□□ -0.68
CEACAM1-202ENST00000344391 GVQW2A0A096LPI5 108 aaPredicted RBP10.78□□□□□ -0.68
CEACAM1-202ENST00000344391 HIGD2BQ4VC39 106 aa10.78□□□□□ -0.68
CEACAM1-202ENST00000344391 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
CEACAM1-202ENST00000344391 LINC00587B1AMM8 73 aa10.77□□□□□ -0.68
CEACAM1-202ENST00000344391 USP17L23D6RBM5 183 aa10.77□□□□□ -0.68
CEACAM1-202ENST00000344391 ZNF561-AS1K7EIQ3 104 aa10.77□□□□□ -0.68
CEACAM1-202ENST00000344391 PSCAO43653 123 aa10.76□□□□□ -0.69
CEACAM1-202ENST00000344391 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
CEACAM1-202ENST00000344391 LITAFQ99732 161 aa10.76□□□□□ -0.69
CEACAM1-202ENST00000344391 TIMM17BO60830 172 aa10.76□□□□□ -0.69
CEACAM1-202ENST00000344391 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
CEACAM1-202ENST00000344391 SPANXB1Q9NS25 103 aaPredicted RBP10.76□□□□□ -0.69
CEACAM1-202ENST00000344391 SACSQ9NZJ4 4579 aa10.75□□□□□ -0.69
CEACAM1-202ENST00000344391 TMEM238C9JI98 176 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 HSD52Q0P140 79 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 MEIG1Q5JSS6 88 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 ADAMTSL4-AS1Q5T5F5 129 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 C10orf25Q5T742 122 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 HYDINQ4G0P3 5121 aa10.74□□□□□ -0.69
CEACAM1-202ENST00000344391 LECT2O14960 151 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 CIRBPQ14011 172 aaKnown RBP10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 TAL2Q16559 108 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 F8WDY8 70 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 SMIM13P0DJ93 91 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 WFDC2Q14508 124 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
CEACAM1-202ENST00000344391 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
CEACAM1-202ENST00000344391 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
CEACAM1-202ENST00000344391 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
CEACAM1-202ENST00000344391 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
CEACAM1-202ENST00000344391 DNAH17Q9UFH2 4485 aa10.7□□□□□ -0.7
CEACAM1-202ENST00000344391 HINT1P49773 126 aaPredicted RBP10.7□□□□□ -0.7
CEACAM1-202ENST00000344391 Q6ZRU5 148 aa10.7□□□□□ -0.7
CEACAM1-202ENST00000344391 Q6ZVH6 145 aa10.7□□□□□ -0.7
CEACAM1-202ENST00000344391 C6orf48Q9UBA6 75 aa10.7□□□□□ -0.7
CEACAM1-202ENST00000344391 LRCOL1A6NCL2 159 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 PFN2P35080 140 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 CEND1Q8N111 149 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 DAND5Q8N907 189 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 TRBV30A0A0K0K1B3 111 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 SLPIP03973 132 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 LINC00158P58513 81 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 COX17Q14061 63 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
CEACAM1-202ENST00000344391 M0R143 59 aa10.68□□□□□ -0.7
CEACAM1-202ENST00000344391 GCSHP23434 173 aa10.68□□□□□ -0.7
CEACAM1-202ENST00000344391 C14orf177Q52M58 125 aa10.67□□□□□ -0.7
CEACAM1-202ENST00000344391 MUSTN1Q8IVN3 82 aa10.67□□□□□ -0.7
CEACAM1-202ENST00000344391 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
CEACAM1-202ENST00000344391 SNHG12Q9BXW3 62 aa10.67□□□□□ -0.7
CEACAM1-202ENST00000344391 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
CEACAM1-202ENST00000344391 IFITM1P13164 125 aa10.66□□□□□ -0.7
CEACAM1-202ENST00000344391 FXYD2P54710 66 aa10.66□□□□□ -0.7
CEACAM1-202ENST00000344391 LCE6AA0A183 80 aa10.65□□□□□ -0.7
CEACAM1-202ENST00000344391 EREGO14944 169 aa10.65□□□□□ -0.7
CEACAM1-202ENST00000344391 NPC2P61916 151 aa10.65□□□□□ -0.7
CEACAM1-202ENST00000344391 BATFQ16520 125 aa10.65□□□□□ -0.7
CEACAM1-202ENST00000344391 LINC00308Q8TCZ7 52 aa10.65□□□□□ -0.7
CEACAM1-202ENST00000344391 CARD19Q96LW7 228 aa10.65□□□□□ -0.7
CEACAM1-202ENST00000344391 FRAS1Q86XX4 4008 aa10.64□□□□□ -0.71
CEACAM1-202ENST00000344391 EIF4EBP3O60516 100 aaPredicted RBP10.64□□□□□ -0.71
CEACAM1-202ENST00000344391 RNF151Q2KHN1 245 aa10.64□□□□□ -0.71
CEACAM1-202ENST00000344391 SOSTDC1Q6X4U4 206 aa10.63□□□□□ -0.71
CEACAM1-202ENST00000344391 A0A087WTM6 91 aa10.62□□□□□ -0.71
CEACAM1-202ENST00000344391 CNBPP62633 177 aaKnown RBP10.62□□□□□ -0.71
CEACAM1-202ENST00000344391 PPDPFQ9H3Y8 114 aa10.62□□□□□ -0.71
CEACAM1-202ENST00000344391 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
CEACAM1-202ENST00000344391 COPS9Q8WXC6 57 aa10.62□□□□□ -0.71
CEACAM1-202ENST00000344391 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
CEACAM1-202ENST00000344391 A4D1N5 150 aa10.6□□□□□ -0.71
CEACAM1-202ENST00000344391 NDUFC2-KCTD14E9PQ53 114 aa10.6□□□□□ -0.71
CEACAM1-202ENST00000344391 Q8N814 137 aa10.6□□□□□ -0.71
CEACAM1-202ENST00000344391 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
CEACAM1-202ENST00000344391 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
CEACAM1-202ENST00000344391 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 A6NJY4 79 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 TLX1NBP0CAT3 122 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 HECTD4Q9Y4D8 3996 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 RYR2Q92736 4967 aa10.59□□□□□ -0.71
CEACAM1-202ENST00000344391 RTL8CO15255 209 aa10.58□□□□□ -0.72
CEACAM1-202ENST00000344391 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
CEACAM1-202ENST00000344391 A6NDN8 102 aa10.58□□□□□ -0.72
CEACAM1-202ENST00000344391 Q6ZRP5 223 aa10.58□□□□□ -0.72
CEACAM1-202ENST00000344391 NHP2Q9NX24 153 aaKnown RBP10.58□□□□□ -0.72
CEACAM1-202ENST00000344391 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
CEACAM1-202ENST00000344391 A0A1B0GWB2 263 aa10.57□□□□□ -0.72
CEACAM1-202ENST00000344391 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms