RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 XCL1P47992 114 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 XCL2Q9UBD3 114 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 IGKV2-40A0A087WW87 121 aaPredicted RBP5.17□□□□□ -1.58
ZNF540-202ENST00000343599 IGHV7-4-1A0A0J9YVY3 117 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 IGKV2D-40P01614 121 aaPredicted RBP5.17□□□□□ -1.58
ZNF540-202ENST00000343599 TMEM61Q8N0U2 210 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 TIMM17AQ99595 171 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 M0R381 172 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 Q6ZRU5 148 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 VSIG2Q96IQ7 327 aa5.17□□□□□ -1.58
ZNF540-202ENST00000343599 KRTAP29-1A8MX34 341 aaPredicted RBP5.16□□□□□ -1.58
ZNF540-202ENST00000343599 C10orf55Q5SWW7 151 aa5.16□□□□□ -1.58
ZNF540-202ENST00000343599 Q8NAQ8 132 aa5.16□□□□□ -1.58
ZNF540-202ENST00000343599 A0A087WVE0 104 aa5.16□□□□□ -1.58
ZNF540-202ENST00000343599 COX7A2LO14548 114 aa5.16□□□□□ -1.58
ZNF540-202ENST00000343599 RBMY1A1P0DJD3 496 aaKnown RBP5.16□□□□□ -1.58
ZNF540-202ENST00000343599 RBMY1CP0DJD4 496 aa5.16□□□□□ -1.58
ZNF540-202ENST00000343599 RBMY1FQ15415 496 aaKnown RBP5.16□□□□□ -1.58
ZNF540-202ENST00000343599 IGKV3D-20A0A0C4DH25 116 aa5.15□□□□□ -1.58
ZNF540-202ENST00000343599 BCE1O60756 84 aa5.15□□□□□ -1.58
ZNF540-202ENST00000343599 PRB4P10163 310 aaPredicted RBP5.15□□□□□ -1.58
ZNF540-202ENST00000343599 MIAQ16674 131 aa5.15□□□□□ -1.58
ZNF540-202ENST00000343599 CSNK1G2-AS1Q8NCQ2 148 aa5.15□□□□□ -1.58
ZNF540-202ENST00000343599 VWFP04275 2813 aa5.15□□□□□ -1.58
ZNF540-202ENST00000343599 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.58
ZNF540-202ENST00000343599 Q8TAT8 98 aa5.15□□□□□ -1.59
ZNF540-202ENST00000343599 ZANQ9Y493 2812 aa5.15□□□□□ -1.59
ZNF540-202ENST00000343599 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.59
ZNF540-202ENST00000343599 IGKV1-17P01599 117 aa5.15□□□□□ -1.59
ZNF540-202ENST00000343599 BAALC-AS2P0C853 105 aa5.15□□□□□ -1.59
ZNF540-202ENST00000343599 KLKP1Q107X0 134 aa5.15□□□□□ -1.59
ZNF540-202ENST00000343599 PPP1R17O96001 155 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 CCKP06307 115 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 NDPQ00604 133 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 ADAMTSL4-AS1Q5T5F5 129 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 OBSCN-AS1Q96MR7 158 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 LINC00474Q9P2X8 69 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 TENM1Q9UKZ4 2725 aa5.14□□□□□ -1.59
ZNF540-202ENST00000343599 TRBV7-6A0A0J9YX20 115 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 I3L2K1 104 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 SLURP1P55000 103 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
ZNF540-202ENST00000343599 C20orf197Q8N268 126 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 DYNLRB2Q8TF09 96 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 C11orf21Q9P2W6 132 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 SVEP1Q4LDE5 3571 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 RPL39LQ96EH5 51 aaKnown RBP5.13□□□□□ -1.59
ZNF540-202ENST00000343599 LAMTOR3Q9UHA4 124 aa5.13□□□□□ -1.59
ZNF540-202ENST00000343599 ATP5EP2Q5VTU8 51 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 LINC00846Q9NV44 126 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 ATRQ13535 2644 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 TIMM17BO60830 172 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 SS18Q15532 418 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 SPANXN1Q5VSR9 72 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 C18orf65Q6ZTR6 163 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 IGHV3-21A0A0B4J1V1 117 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 DNAL4O96015 105 aa5.12□□□□□ -1.59
ZNF540-202ENST00000343599 CIRBPQ14011 172 aaKnown RBP5.12□□□□□ -1.59
ZNF540-202ENST00000343599 NBEAL1Q6ZS30 2694 aa5.11□□□□□ -1.59
ZNF540-202ENST00000343599 PLAC8L1A1L4L8 177 aa5.11□□□□□ -1.59
ZNF540-202ENST00000343599 K7EQG2 157 aa5.11□□□□□ -1.59
ZNF540-202ENST00000343599 RPL27AP46776 148 aaKnown RBP5.11□□□□□ -1.59
ZNF540-202ENST00000343599 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
ZNF540-202ENST00000343599 PIK3CD-AS1Q5SR53 167 aa5.11□□□□□ -1.59
ZNF540-202ENST00000343599 IBA57-AS1B1ANH7 110 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 IGHV3-30-3P0DP02 117 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 STAB1Q9NY15 2570 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 MGAM2Q2M2H8 2515 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 JMJD1CQ15652 2540 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 TRAV12-3A0A0B4J271 114 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 NDUFC1O43677 76 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 NXPH4O95158 308 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 TRBV12-3P01733 135 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 SNRPD3P62318 126 aaKnown RBP5.1□□□□□ -1.59
ZNF540-202ENST00000343599 C10orf99Q6UWK7 81 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 Q75L30 129 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 Q9UF83 564 aa5.1□□□□□ -1.59
ZNF540-202ENST00000343599 TRBV27A0A0K0K1C4 114 aa5.09□□□□□ -1.59
ZNF540-202ENST00000343599 POLR2KP53803 58 aaKnown RBP5.09□□□□□ -1.59
ZNF540-202ENST00000343599 RPL39P62891 51 aaKnown RBP5.09□□□□□ -1.59
ZNF540-202ENST00000343599 STARD9Q9P2P6 4700 aa5.09□□□□□ -1.6
ZNF540-202ENST00000343599 ODF3L2Q3SX64 289 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 TRAV13-2A0A0B4J235 113 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 K7EIM0 57 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 S100A7L2Q5SY68 101 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 NACAE9PAV3 2078 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 RTL8CO15255 209 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 PAX4O43316 350 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 RBM3P98179 157 aaKnown RBP5.08□□□□□ -1.6
ZNF540-202ENST00000343599 FAM218AQ96MZ4 157 aa5.08□□□□□ -1.6
ZNF540-202ENST00000343599 IGHV3-64A0A075B6Q5 118 aa5.07□□□□□ -1.6
ZNF540-202ENST00000343599 TRAV23DV6A0A075B6W5 121 aa5.07□□□□□ -1.6
ZNF540-202ENST00000343599 IGHV1-58A0A0C4DH39 117 aa5.07□□□□□ -1.6
ZNF540-202ENST00000343599 NDUFA12Q9UI09 145 aa5.07□□□□□ -1.6
ZNF540-202ENST00000343599 PRAC2D3DTV9 90 aa5.06□□□□□ -1.6
ZNF540-202ENST00000343599 F8WEM9 126 aa5.06□□□□□ -1.6
ZNF540-202ENST00000343599 DNAH8Q96JB1 4490 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms