RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 CARD19Q96LW7 228 aa8.38□□□□□ -1.07
HLA-DQA1-201ENST00000343139 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
HLA-DQA1-201ENST00000343139 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
HLA-DQA1-201ENST00000343139 EPM2AB3EWF7 344 aa8.37□□□□□ -1.07
HLA-DQA1-201ENST00000343139 COX6A2Q02221 97 aa8.37□□□□□ -1.07
HLA-DQA1-201ENST00000343139 HSBP1L1C9JCN9 74 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 IGLC3P0DOY3 106 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 SPAG11BQ08648 103 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 RNF151Q2KHN1 245 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
HLA-DQA1-201ENST00000343139 ATP5LO75964 103 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 HAMPP81172 84 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 ORAOV1Q8WV07 137 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 CAMK2N2Q96S95 79 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 PMVKQ15126 192 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 Q5VSD8 79 aa8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
HLA-DQA1-201ENST00000343139 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
HLA-DQA1-201ENST00000343139 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.07
HLA-DQA1-201ENST00000343139 PANO1I0J062 215 aa8.34□□□□□ -1.07
HLA-DQA1-201ENST00000343139 Q6ZRU5 148 aa8.34□□□□□ -1.07
HLA-DQA1-201ENST00000343139 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
HLA-DQA1-201ENST00000343139 GEMIN7Q9H840 131 aaKnown RBP8.34□□□□□ -1.07
HLA-DQA1-201ENST00000343139 M0R143 59 aa8.33□□□□□ -1.08
HLA-DQA1-201ENST00000343139 NDUFA1O15239 70 aa8.33□□□□□ -1.08
HLA-DQA1-201ENST00000343139 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
HLA-DQA1-201ENST00000343139 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
HLA-DQA1-201ENST00000343139 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
HLA-DQA1-201ENST00000343139 PLAC8Q9NZF1 115 aa8.32□□□□□ -1.08
HLA-DQA1-201ENST00000343139 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
HLA-DQA1-201ENST00000343139 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
HLA-DQA1-201ENST00000343139 HNRNPA3P51991 378 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-201ENST00000343139 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
HLA-DQA1-201ENST00000343139 Q8IZM0 81 aa8.31□□□□□ -1.08
HLA-DQA1-201ENST00000343139 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
HLA-DQA1-201ENST00000343139 A0A087WYN8 130 aa8.3□□□□□ -1.08
HLA-DQA1-201ENST00000343139 A0A096LNI7 61 aa8.3□□□□□ -1.08
HLA-DQA1-201ENST00000343139 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
HLA-DQA1-201ENST00000343139 TLX1NBP0CAT3 122 aa8.3□□□□□ -1.08
HLA-DQA1-201ENST00000343139 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
HLA-DQA1-201ENST00000343139 MAJINQ3KP22 176 aa8.3□□□□□ -1.08
HLA-DQA1-201ENST00000343139 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
HLA-DQA1-201ENST00000343139 H0Y8G0 127 aa8.29□□□□□ -1.08
HLA-DQA1-201ENST00000343139 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
HLA-DQA1-201ENST00000343139 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
HLA-DQA1-201ENST00000343139 SNHG12Q9BXW3 62 aa8.29□□□□□ -1.08
HLA-DQA1-201ENST00000343139 IGKV2-24A0A0C4DH68 120 aa8.28□□□□□ -1.08
HLA-DQA1-201ENST00000343139 PRSS2P07478 247 aa8.28□□□□□ -1.08
HLA-DQA1-201ENST00000343139 ODF1Q14990 250 aa8.28□□□□□ -1.08
HLA-DQA1-201ENST00000343139 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
HLA-DQA1-201ENST00000343139 UNQ6190/PRO20217Q6UXQ8 127 aa8.28□□□□□ -1.08
HLA-DQA1-201ENST00000343139 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 H3BRM9 83 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 CXCL5P42830 114 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 COX8AP10176 69 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 STPG4Q8N801 248 aa8.27□□□□□ -1.09
HLA-DQA1-201ENST00000343139 DPM2O94777 84 aa8.26□□□□□ -1.09
HLA-DQA1-201ENST00000343139 KRTAP10-4P60372 401 aaPredicted RBP8.26□□□□□ -1.09
HLA-DQA1-201ENST00000343139 CKS1BP61024 79 aa8.26□□□□□ -1.09
HLA-DQA1-201ENST00000343139 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
HLA-DQA1-201ENST00000343139 DLEU1O43261 78 aa8.25□□□□□ -1.09
HLA-DQA1-201ENST00000343139 IGKCP01834 107 aa8.25□□□□□ -1.09
HLA-DQA1-201ENST00000343139 PLNP26678 52 aa8.25□□□□□ -1.09
HLA-DQA1-201ENST00000343139 GAGE2BQ13066 116 aa8.25□□□□□ -1.09
HLA-DQA1-201ENST00000343139 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
HLA-DQA1-201ENST00000343139 F8VRH5 84 aa8.24□□□□□ -1.09
HLA-DQA1-201ENST00000343139 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
HLA-DQA1-201ENST00000343139 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
HLA-DQA1-201ENST00000343139 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
HLA-DQA1-201ENST00000343139 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
HLA-DQA1-201ENST00000343139 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
HLA-DQA1-201ENST00000343139 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
HLA-DQA1-201ENST00000343139 Q6ZRP5 223 aa8.23□□□□□ -1.09
HLA-DQA1-201ENST00000343139 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
HLA-DQA1-201ENST00000343139 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 ANKRD39Q53RE8 183 aa8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 COL5A1-AS1Q5SY13 56 aa8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 C7orf33Q8WU49 177 aa8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 CHTOPQ9Y3Y2 248 aaKnown RBP8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 BOD1L2Q8IYS8 172 aa8.22□□□□□ -1.09
HLA-DQA1-201ENST00000343139 C11orf86A6NJI1 115 aa8.21□□□□□ -1.1
HLA-DQA1-201ENST00000343139 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
HLA-DQA1-201ENST00000343139 SFTA2Q6UW10 78 aa8.2□□□□□ -1.1
HLA-DQA1-201ENST00000343139 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
HLA-DQA1-201ENST00000343139 A0A1B0GV90 55 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms