RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SERP2Q8N6R1 65 aa9.16□□□□□ -0.94
DNMT1-201ENST00000340748 FAM240AA0A1B0GVK7 77 aa9.16□□□□□ -0.94
DNMT1-201ENST00000340748 Q6JHZ5 121 aa9.15□□□□□ -0.94
DNMT1-201ENST00000340748 C3orf84H3BNL1 204 aa9.15□□□□□ -0.94
DNMT1-201ENST00000340748 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
DNMT1-201ENST00000340748 NDUFC1O43677 76 aa9.15□□□□□ -0.94
DNMT1-201ENST00000340748 SBSPONQ8IVN8 264 aa9.15□□□□□ -0.94
DNMT1-201ENST00000340748 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.95
DNMT1-201ENST00000340748 FN1P02751 2386 aaKnown RBP9.15□□□□□ -0.95
DNMT1-201ENST00000340748 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 MTORP42345 2549 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 IGLV4-60A0A075B6I1 120 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 F8WDY8 70 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 SEC61GP60059 68 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 UNQ6190/PRO20217Q6UXQ8 127 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 MDFIQ99750 246 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
DNMT1-201ENST00000340748 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
DNMT1-201ENST00000340748 Q6Q795 121 aa9.13□□□□□ -0.95
DNMT1-201ENST00000340748 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
DNMT1-201ENST00000340748 XGP55808 180 aa9.13□□□□□ -0.95
DNMT1-201ENST00000340748 USP9YO00507 2555 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-201ENST00000340748 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
DNMT1-201ENST00000340748 Q6ZSN1 163 aa9.12□□□□□ -0.95
DNMT1-201ENST00000340748 WFDC10BQ8IUB3 73 aa9.12□□□□□ -0.95
DNMT1-201ENST00000340748 Q8N814 137 aa9.12□□□□□ -0.95
DNMT1-201ENST00000340748 ADAMTSL4-AS1Q5T5F5 129 aa9.11□□□□□ -0.95
DNMT1-201ENST00000340748 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
DNMT1-201ENST00000340748 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
DNMT1-201ENST00000340748 FAM19A3Q7Z5A8 133 aa9.1□□□□□ -0.95
DNMT1-201ENST00000340748 TET2Q6N021 2002 aaPredicted RBP9.1□□□□□ -0.95
DNMT1-201ENST00000340748 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
DNMT1-201ENST00000340748 COX7CP15954 63 aa9.1□□□□□ -0.95
DNMT1-201ENST00000340748 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
DNMT1-201ENST00000340748 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
DNMT1-201ENST00000340748 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
DNMT1-201ENST00000340748 CASC2Q6XLA1 102 aa9.08□□□□□ -0.96
DNMT1-201ENST00000340748 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
DNMT1-201ENST00000340748 ACANP16112 2415 aa9.08□□□□□ -0.96
DNMT1-201ENST00000340748 C9orf116Q5BN46 136 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-201ENST00000340748 ANKRD17O75179 2603 aaKnown RBP9.07□□□□□ -0.96
DNMT1-201ENST00000340748 C2orf48Q96LS8 159 aa9.07□□□□□ -0.96
DNMT1-201ENST00000340748 A0A087WYN8 130 aa9.06□□□□□ -0.96
DNMT1-201ENST00000340748 M0QXV9 152 aa9.06□□□□□ -0.96
DNMT1-201ENST00000340748 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
DNMT1-201ENST00000340748 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
DNMT1-201ENST00000340748 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
DNMT1-201ENST00000340748 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
DNMT1-201ENST00000340748 V9GYY9 64 aa9.05□□□□□ -0.96
DNMT1-201ENST00000340748 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
DNMT1-201ENST00000340748 LYPD5Q6UWN5 251 aa9.04□□□□□ -0.96
DNMT1-201ENST00000340748 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
DNMT1-201ENST00000340748 CCDC179H3BU77 68 aa9.03□□□□□ -0.96
DNMT1-201ENST00000340748 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
DNMT1-201ENST00000340748 SNURFQ9Y675 71 aa9.03□□□□□ -0.96
DNMT1-201ENST00000340748 C6orf223Q8N319 242 aa9.02□□□□□ -0.96
DNMT1-201ENST00000340748 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
DNMT1-201ENST00000340748 IGLV9-49A0A0B4J1Y8 123 aa9.02□□□□□ -0.97
DNMT1-201ENST00000340748 C1orf137Q5JT78 98 aa9.02□□□□□ -0.97
DNMT1-201ENST00000340748 LINC00315P59091 139 aa9.01□□□□□ -0.97
DNMT1-201ENST00000340748 IGLV5-39A0A0G2JS06 123 aa9.01□□□□□ -0.97
DNMT1-201ENST00000340748 PRYO14603 147 aa9.01□□□□□ -0.97
DNMT1-201ENST00000340748 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
DNMT1-201ENST00000340748 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
DNMT1-201ENST00000340748 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
DNMT1-201ENST00000340748 C16orf90A8MZG2 172 aa9□□□□□ -0.97
DNMT1-201ENST00000340748 K7EIL1 84 aa8.99□□□□□ -0.97
DNMT1-201ENST00000340748 PCSK5Q92824 1860 aa8.99□□□□□ -0.97
DNMT1-201ENST00000340748 SETD2Q9BYW2 2564 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-201ENST00000340748 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
DNMT1-201ENST00000340748 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
DNMT1-201ENST00000340748 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
DNMT1-201ENST00000340748 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
DNMT1-201ENST00000340748 KRTAP1-3Q8IUG1 177 aa8.98□□□□□ -0.97
DNMT1-201ENST00000340748 FAM30AQ9NZY2 134 aa8.98□□□□□ -0.97
DNMT1-201ENST00000340748 A0A096LNT2 108 aa8.97□□□□□ -0.97
DNMT1-201ENST00000340748 KLK9Q2XQG4 91 aa8.97□□□□□ -0.97
DNMT1-201ENST00000340748 Q8N9L7 120 aa8.95□□□□□ -0.98
DNMT1-201ENST00000340748 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
DNMT1-201ENST00000340748 HELZ2Q9BYK8 2649 aaKnown RBP8.94□□□□□ -0.98
DNMT1-201ENST00000340748 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
DNMT1-201ENST00000340748 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
DNMT1-201ENST00000340748 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
DNMT1-201ENST00000340748 Q6ZRU5 148 aa8.94□□□□□ -0.98
DNMT1-201ENST00000340748 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
DNMT1-201ENST00000340748 J3QL48 77 aa8.93□□□□□ -0.98
DNMT1-201ENST00000340748 Q9BRP9 147 aa8.92□□□□□ -0.98
DNMT1-201ENST00000340748 A0A087WVE0 104 aa8.92□□□□□ -0.98
DNMT1-201ENST00000340748 KRTAP1-1Q07627 177 aa8.91□□□□□ -0.98
DNMT1-201ENST00000340748 LINC01556Q5JQF7 62 aa8.9□□□□□ -0.99
DNMT1-201ENST00000340748 K7ERS5 55 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 H3BNG1 76 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 KRTAP10-3P60369 221 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 Q8N3U1 123 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 ESRGQ1W209 222 aa8.89□□□□□ -0.99
DNMT1-201ENST00000340748 Q6ZVQ6 151 aa8.88□□□□□ -0.99
DNMT1-201ENST00000340748 PRR4Q16378 134 aa8.88□□□□□ -0.99
DNMT1-201ENST00000340748 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms