RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CBY1Q9Y3M2 126 aa4.8□□□□□ -1.64
NUP43-201ENST00000340413 A4D1N5 150 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 UBE2DNLQ8IWF7 75 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 HIST1H4GQ99525 98 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 XCL1P47992 114 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 UBE2WQ96B02 151 aa4.79□□□□□ -1.64
NUP43-201ENST00000340413 PLA2G2DQ9UNK4 145 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 SPAG11BQ08648 103 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 CKS1BP61024 79 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 LYRM7Q5U5X0 104 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 ERG28Q9UKR5 140 aa4.78□□□□□ -1.64
NUP43-201ENST00000340413 CNBPP62633 177 aaKnown RBP4.77□□□□□ -1.65
NUP43-201ENST00000340413 MEIG1Q5JSS6 88 aa4.77□□□□□ -1.65
NUP43-201ENST00000340413 SMIM13P0DJ93 91 aa4.77□□□□□ -1.65
NUP43-201ENST00000340413 PCP4L1A6NKN8 68 aa4.77□□□□□ -1.65
NUP43-201ENST00000340413 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
NUP43-201ENST00000340413 C15orf56Q8N910 161 aa4.77□□□□□ -1.65
NUP43-201ENST00000340413 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
NUP43-201ENST00000340413 Q6ZR54 194 aa4.76□□□□□ -1.65
NUP43-201ENST00000340413 C5orf38Q86SI9 138 aa4.76□□□□□ -1.65
NUP43-201ENST00000340413 LINC00308Q8TCZ7 52 aa4.76□□□□□ -1.65
NUP43-201ENST00000340413 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
NUP43-201ENST00000340413 ZNF561-AS1K7EIQ3 104 aa4.75□□□□□ -1.65
NUP43-201ENST00000340413 TRAV13-2A0A0B4J235 113 aa4.75□□□□□ -1.65
NUP43-201ENST00000340413 IGLV10-54A0A075B6I4 117 aa4.74□□□□□ -1.65
NUP43-201ENST00000340413 C9orf118A6NHY6 69 aa4.74□□□□□ -1.65
NUP43-201ENST00000340413 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
NUP43-201ENST00000340413 HINT1P49773 126 aaPredicted RBP4.74□□□□□ -1.65
NUP43-201ENST00000340413 DNAH1Q9P2D7 4330 aa4.74□□□□□ -1.65
NUP43-201ENST00000340413 Q6ZRN7 208 aaPredicted RBP4.74□□□□□ -1.65
NUP43-201ENST00000340413 Q8N3U1 123 aa4.74□□□□□ -1.65
NUP43-201ENST00000340413 MUSTN1Q8IVN3 82 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 IGKV3OR2-268A0A0C4DH90 116 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 TAX1BP3O14907 124 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 FXYD2P54710 66 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 SYCNQ0VAF6 134 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 CLPSL2Q6UWE3 100 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 LINC01600Q96MT4 127 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 PRO1854Q9UHT4 67 aa4.73□□□□□ -1.65
NUP43-201ENST00000340413 NDUFC2-KCTD14E9PQ53 114 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 CASC10Q5T4H9 136 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 ADAMTSL4-AS1Q5T5F5 129 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 M0QXV9 152 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 CARD19Q96LW7 228 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 CAMK2N2Q96S95 79 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 TRBV7-6A0A0J9YX20 115 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 C6orf223Q8N319 242 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 LINC00476Q8WZB0 136 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 TOMM7Q9P0U1 55 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 LOC107984640A0A0U1RRK4 108 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 A0A1B0GX51 115 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 USP17L23D6RBM5 183 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 CFC1P0CG37 223 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 C6orf48Q9UBA6 75 aa4.72□□□□□ -1.65
NUP43-201ENST00000340413 VPS13DQ5THJ4 4388 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 TRBV20-1A0A075B6N2 111 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 EPM2AB3EWF7 344 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 H3BQ85 93 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 LINC00158P58513 81 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 MIR7-3HGQ8N6C7 128 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 LINC00474Q9P2X8 69 aa4.71□□□□□ -1.66
NUP43-201ENST00000340413 STAB2Q8WWQ8 2551 aa4.7□□□□□ -1.66
NUP43-201ENST00000340413 LRCOL1A6NCL2 159 aa4.7□□□□□ -1.66
NUP43-201ENST00000340413 RPL28P46779 137 aaKnown RBP4.7□□□□□ -1.66
NUP43-201ENST00000340413 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
NUP43-201ENST00000340413 SND1-IT1Q9HBX3 110 aa4.7□□□□□ -1.66
NUP43-201ENST00000340413 NHP2Q9NX24 153 aaKnown RBP4.7□□□□□ -1.66
NUP43-201ENST00000340413 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
NUP43-201ENST00000340413 A0A1W2PPM0 123 aa4.69□□□□□ -1.66
NUP43-201ENST00000340413 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
NUP43-201ENST00000340413 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
NUP43-201ENST00000340413 GTF2H5Q6ZYL4 71 aa4.69□□□□□ -1.66
NUP43-201ENST00000340413 Q6ZRU5 148 aa4.69□□□□□ -1.66
NUP43-201ENST00000340413 FABP2P12104 132 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 DNHD1Q96M86 4753 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 H0YGX0 51 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 PSCAO43653 123 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 COX6CP09669 75 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 TMEM126AQ9H061 195 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 TSPAN13O95857 204 aa4.68□□□□□ -1.66
NUP43-201ENST00000340413 M0R378 163 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 Q8N814 137 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 Q9HAA7 133 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 C16orf90A8MZG2 172 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 K7EP34 96 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 BATFQ16520 125 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 IGLV6-57P01721 117 aa4.67□□□□□ -1.66
NUP43-201ENST00000340413 C10orf25Q5T742 122 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms