RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 GOLGA4Q13439 2230 aaKnown RBP0.48□□□□□ -2.33
XRCC4-202ENST00000338635 CUX1P39880 1505 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 SUPT6HQ7KZ85 1726 aaKnown RBP0.48□□□□□ -2.33
XRCC4-202ENST00000338635 MYMXA0A1B0GTQ4 84 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 IQCF6A8MYZ5 107 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 PLGLAQ15195 96 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 CNFNQ9BYD5 112 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 LRP6O75581 1613 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 MAGI2Q86UL8 1455 aa0.48□□□□□ -2.33
XRCC4-202ENST00000338635 NEXMIFQ5QGS0 1516 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 KNDC1Q76NI1 1749 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 KIF14Q15058 1648 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 TRBV7-4A0A0J9YYF1 115 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 A0A1B0GU69 56 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 PIGYQ3MUY2 71 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 C6orf201Q7Z4U5 140 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 TP53AIP1Q9HCN2 124 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 PLAC8Q9NZF1 115 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 UBE2D4Q9Y2X8 147 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 ERVK-7P63135 1459 aa0.47□□□□□ -2.33
XRCC4-202ENST00000338635 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
XRCC4-202ENST00000338635 MAP3K4Q9Y6R4 1608 aa0.46□□□□□ -2.34
XRCC4-202ENST00000338635 RRBP1Q9P2E9 1410 aaKnown RBP0.46□□□□□ -2.34
XRCC4-202ENST00000338635 CEBPZOSA8MTT3 80 aa0.46□□□□□ -2.34
XRCC4-202ENST00000338635 IGLC3P0DOY3 106 aa0.46□□□□□ -2.34
XRCC4-202ENST00000338635 FAM208BQ5VWN6 2430 aa0.46□□□□□ -2.34
XRCC4-202ENST00000338635 ZNF462Q96JM2 2506 aa0.46□□□□□ -2.34
XRCC4-202ENST00000338635 XRN1Q8IZH2 1706 aaKnown RBP0.45□□□□□ -2.34
XRCC4-202ENST00000338635 KCPQ6ZWJ8 1503 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 KDM5DQ9BY66 1539 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 A0A1B0GUT8 65 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 H3BUT2 72 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 IGLC2P0DOY2 106 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 BVES-AS1Q5T3Y7 98 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 PRO0255Q9UI72 69 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 SHPRHQ149N8 1683 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 A0A0G2JMZ2 1700 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 UBR1Q8IWV7 1749 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 CRYBG1Q9Y4K1 1723 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 SETBP1Q9Y6X0 1596 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
XRCC4-202ENST00000338635 LRRC9Q6ZRR7 1453 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.44□□□□□ -2.34
XRCC4-202ENST00000338635 DCAF1Q9Y4B6 1507 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 ANKRD36A6QL64 1941 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 SAMD9Q5K651 1589 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 TARBP1Q13395 1621 aaKnown RBP0.44□□□□□ -2.34
XRCC4-202ENST00000338635 C5P01031 1676 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 I3L2K1 104 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 PRB3Q04118 309 aaPredicted RBP0.44□□□□□ -2.34
XRCC4-202ENST00000338635 DEFB112Q30KQ8 113 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 Q8IZM0 81 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 PLCE1Q9P212 2302 aa0.44□□□□□ -2.34
XRCC4-202ENST00000338635 ANKARQ7Z5J8 1434 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 ABCC1P33527 1531 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 LAMC1P11047 1609 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 PAPPA2Q9BXP8 1791 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 CACNA1HO95180 2353 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 FXYD6-FXYD2A0A087WZ82 144 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 NDUFB1O75438 58 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 C18orf32Q8TCD1 76 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 USMG5Q96IX5 58 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 ATP7BP35670 1465 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 CCDC141Q6ZP82 1450 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 DOPEY2Q9Y3R5 2298 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 TULP4Q9NRJ4 1543 aa0.43□□□□□ -2.34
XRCC4-202ENST00000338635 URB1O60287 2271 aaKnown RBP0.42□□□□□ -2.34
XRCC4-202ENST00000338635 SMIM13P0DJ93 91 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 DEFB121Q5J5C9 76 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 DEFB123Q8N688 67 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 SMCO4Q9NRQ5 59 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 CRIPTQ9P021 101 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 DIP2BQ9P265 1576 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 PAPPAQ13219 1627 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 KIF20BQ96Q89 1820 aa0.42□□□□□ -2.34
XRCC4-202ENST00000338635 A0A087WXM4 84 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 PDCD5O14737 125 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 KIAA0556O60303 1618 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 ANKRD17O75179 2603 aaKnown RBP0.41□□□□□ -2.34
XRCC4-202ENST00000338635 CFDP00746 253 aaPredicted RBP0.41□□□□□ -2.34
XRCC4-202ENST00000338635 NHSL1Q5SYE7 1610 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 ATP5EP2Q5VTU8 51 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 PKD1L3Q7Z443 1732 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 GAFA1Q96PS6 74 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 UBR3Q6ZT12 1888 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 TMEM131LA2VDJ0 1609 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 ALKQ9UM73 1620 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 MAP3K1Q13233 1512 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 URB2Q14146 1524 aaKnown RBP0.41□□□□□ -2.34
XRCC4-202ENST00000338635 NKTRP30414 1462 aaKnown RBP0.41□□□□□ -2.34
XRCC4-202ENST00000338635 NCOA2Q15596 1464 aa0.41□□□□□ -2.34
XRCC4-202ENST00000338635 TRAV21A0A0B4J279 112 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 SPTY2D1-AS1A0A0U1RR47 76 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 UMAD1C9J7I0 102 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 I3L3M4 83 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 K7EQZ3 153 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 COX8AP10176 69 aa0.4□□□□□ -2.34
XRCC4-202ENST00000338635 COX6B1P14854 86 aa0.4□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms