RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PRO3102Q9H379 93 aa9.34□□□□□ -0.91
HLCS-201ENST00000336648 SORL1Q92673 2214 aa9.34□□□□□ -0.91
HLCS-201ENST00000336648 ACYP2P14621 99 aa9.34□□□□□ -0.91
HLCS-201ENST00000336648 Q8N2B8 174 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
HLCS-201ENST00000336648 SBSPONQ8IVN8 264 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 IGLV4-60A0A075B6I1 120 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 MED12LQ86YW9 2145 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 PRM2P04554 102 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
HLCS-201ENST00000336648 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
HLCS-201ENST00000336648 Q9UF83 564 aa9.31□□□□□ -0.92
HLCS-201ENST00000336648 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
HLCS-201ENST00000336648 Q6ZTC4 211 aa9.31□□□□□ -0.92
HLCS-201ENST00000336648 OXLD1Q5BKU9 147 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 ADAMTSL4-AS1Q5T5F5 129 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 BCE1O60756 84 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 PRR14LQ5THK1 2151 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 FSHBP01225 129 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
HLCS-201ENST00000336648 A0A1B0GW54 56 aa9.29□□□□□ -0.92
HLCS-201ENST00000336648 AVPP01185 164 aa9.29□□□□□ -0.92
HLCS-201ENST00000336648 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
HLCS-201ENST00000336648 KIAA1549Q9HCM3 1950 aa9.28□□□□□ -0.92
HLCS-201ENST00000336648 NOTCH2Q04721 2471 aa9.28□□□□□ -0.92
HLCS-201ENST00000336648 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
HLCS-201ENST00000336648 NAV3Q8IVL0 2385 aa9.27□□□□□ -0.92
HLCS-201ENST00000336648 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.92
HLCS-201ENST00000336648 C10orf142B7Z368 130 aa9.27□□□□□ -0.93
HLCS-201ENST00000336648 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
HLCS-201ENST00000336648 LINC01556Q5JQF7 62 aa9.27□□□□□ -0.93
HLCS-201ENST00000336648 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
HLCS-201ENST00000336648 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
HLCS-201ENST00000336648 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
HLCS-201ENST00000336648 CDIP1Q9H305 208 aa9.26□□□□□ -0.93
HLCS-201ENST00000336648 A0A096LNJ9 63 aa9.25□□□□□ -0.93
HLCS-201ENST00000336648 C6orf48Q9UBA6 75 aa9.25□□□□□ -0.93
HLCS-201ENST00000336648 C1orf134Q5TEV5 83 aa9.24□□□□□ -0.93
HLCS-201ENST00000336648 CACNA1AO00555 2505 aa9.24□□□□□ -0.93
HLCS-201ENST00000336648 H3BPC8 53 aa9.23□□□□□ -0.93
HLCS-201ENST00000336648 NHLRC4P0CG21 123 aaPredicted RBP9.23□□□□□ -0.93
HLCS-201ENST00000336648 SONP18583 2426 aaKnown RBP9.23□□□□□ -0.93
HLCS-201ENST00000336648 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
HLCS-201ENST00000336648 EDN2P20800 178 aa9.23□□□□□ -0.93
HLCS-201ENST00000336648 ATRXP46100 2492 aa9.22□□□□□ -0.93
HLCS-201ENST00000336648 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
HLCS-201ENST00000336648 OTOGLQ3ZCN5 2332 aa9.22□□□□□ -0.93
HLCS-201ENST00000336648 CUL9Q8IWT3 2517 aa9.22□□□□□ -0.93
HLCS-201ENST00000336648 PLXNB1O43157 2135 aa9.21□□□□□ -0.94
HLCS-201ENST00000336648 BDP1A6H8Y1 2624 aa9.2□□□□□ -0.94
HLCS-201ENST00000336648 Q6ZRU5 148 aa9.19□□□□□ -0.94
HLCS-201ENST00000336648 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
HLCS-201ENST00000336648 Q6ZSN1 163 aa9.19□□□□□ -0.94
HLCS-201ENST00000336648 HCFC1P51610 2035 aa9.19□□□□□ -0.94
HLCS-201ENST00000336648 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
HLCS-201ENST00000336648 SMCR5Q8TEV8 140 aa9.18□□□□□ -0.94
HLCS-201ENST00000336648 KIF25-AS1Q9Y6Z4 181 aa9.18□□□□□ -0.94
HLCS-201ENST00000336648 CDSNQ15517 529 aa9.18□□□□□ -0.94
HLCS-201ENST00000336648 C22orf24Q9Y442 160 aa9.18□□□□□ -0.94
HLCS-201ENST00000336648 ATG2AQ2TAZ0 1938 aa9.18□□□□□ -0.94
HLCS-201ENST00000336648 TTC28Q96AY4 2481 aa9.17□□□□□ -0.94
HLCS-201ENST00000336648 NAV2Q8IVL1 2488 aa9.17□□□□□ -0.94
HLCS-201ENST00000336648 MUC22E2RYF6 1773 aaPredicted RBP9.17□□□□□ -0.94
HLCS-201ENST00000336648 COL4A4P53420 1690 aaPredicted RBP9.17□□□□□ -0.94
HLCS-201ENST00000336648 SPATA3Q8NHX4 192 aa9.16□□□□□ -0.94
HLCS-201ENST00000336648 PCDH15Q96QU1 1955 aa9.14□□□□□ -0.95
HLCS-201ENST00000336648 H3BNG1 76 aa9.14□□□□□ -0.95
HLCS-201ENST00000336648 PRRC2AP48634 2157 aaKnown RBP9.14□□□□□ -0.95
HLCS-201ENST00000336648 IGHV3OR16-9A0A0B4J2B5 98 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 C11orf72Q8NBR9 251 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 TANC2Q9HCD6 1990 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 CD164Q04900 197 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 MDFIQ99750 246 aa9.13□□□□□ -0.95
HLCS-201ENST00000336648 PCNX3Q9H6A9 2034 aa9.12□□□□□ -0.95
HLCS-201ENST00000336648 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
HLCS-201ENST00000336648 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
HLCS-201ENST00000336648 KRTAP10-9P60411 292 aa9.12□□□□□ -0.95
HLCS-201ENST00000336648 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
HLCS-201ENST00000336648 A8MTW9 85 aa9.11□□□□□ -0.95
HLCS-201ENST00000336648 FHL3Q13643 280 aa9.11□□□□□ -0.95
HLCS-201ENST00000336648 SMR3AQ99954 134 aa9.1□□□□□ -0.95
HLCS-201ENST00000336648 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
HLCS-201ENST00000336648 C2CD3Q4AC94 2353 aa9.09□□□□□ -0.95
HLCS-201ENST00000336648 HIVEP3Q5T1R4 2406 aa9.09□□□□□ -0.95
HLCS-201ENST00000336648 FAM19A4Q96LR4 140 aa9.09□□□□□ -0.95
HLCS-201ENST00000336648 ARHGAP32A7KAX9 2087 aa9.09□□□□□ -0.96
HLCS-201ENST00000336648 LRP4O75096 1905 aa9.08□□□□□ -0.96
HLCS-201ENST00000336648 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
HLCS-201ENST00000336648 EML5Q05BV3 1969 aa9.08□□□□□ -0.96
HLCS-201ENST00000336648 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
HLCS-201ENST00000336648 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
HLCS-201ENST00000336648 MYO18BQ8IUG5 2567 aa9.07□□□□□ -0.96
HLCS-201ENST00000336648 LINC00167Q96N53 147 aa9.06□□□□□ -0.96
HLCS-201ENST00000336648 A0A1W2PPR1 153 aa9.06□□□□□ -0.96
HLCS-201ENST00000336648 LINC00315P59091 139 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms