RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TINCRA0A1B0GVN0 87 aa9.85□□□□□ -0.83
SF1-202ENST00000334944 J3QKU1 62 aa9.85□□□□□ -0.83
SF1-202ENST00000334944 COX6A2Q02221 97 aa9.84□□□□□ -0.83
SF1-202ENST00000334944 PRIMA1Q86XR5 153 aa9.84□□□□□ -0.83
SF1-202ENST00000334944 PKIGQ9Y2B9 76 aa9.84□□□□□ -0.83
SF1-202ENST00000334944 TRGV2A0A075B6R0 118 aa9.83□□□□□ -0.84
SF1-202ENST00000334944 RNASE1P07998 156 aaKnown RBP9.83□□□□□ -0.84
SF1-202ENST00000334944 MALP21145 153 aa9.83□□□□□ -0.84
SF1-202ENST00000334944 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
SF1-202ENST00000334944 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
SF1-202ENST00000334944 SLPIP03973 132 aa9.82□□□□□ -0.84
SF1-202ENST00000334944 TRAV23DV6A0A075B6W5 121 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 IGKV3OR2-268A0A0C4DH90 116 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 NCR3O14931 201 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 LINC00336Q6ZUF6 198 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
SF1-202ENST00000334944 INAFM2P0DMQ5 153 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 A0A087WYN8 130 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 KRTAP10-3P60369 221 aa9.81□□□□□ -0.84
SF1-202ENST00000334944 K7EQD1 137 aa9.8□□□□□ -0.84
SF1-202ENST00000334944 TRRAPQ9Y4A5 3859 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 IGLV1-51P01701 117 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 RPL36AP83881 106 aaKnown RBP9.79□□□□□ -0.84
SF1-202ENST00000334944 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 RPL36ALQ969Q0 106 aaKnown RBP9.79□□□□□ -0.84
SF1-202ENST00000334944 C19orf73Q9NVV2 129 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 HIVEP1P15822 2718 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 PFN2P35080 140 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 IL17DQ8TAD2 202 aa9.79□□□□□ -0.84
SF1-202ENST00000334944 NDUFA1O15239 70 aa9.78□□□□□ -0.84
SF1-202ENST00000334944 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
SF1-202ENST00000334944 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
SF1-202ENST00000334944 GHRHP01286 108 aa9.77□□□□□ -0.85
SF1-202ENST00000334944 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.85
SF1-202ENST00000334944 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
SF1-202ENST00000334944 LINC00242Q5T6M2 205 aa9.76□□□□□ -0.85
SF1-202ENST00000334944 C16orf95Q9H693 158 aa9.76□□□□□ -0.85
SF1-202ENST00000334944 PF4P02776 101 aa9.76□□□□□ -0.85
SF1-202ENST00000334944 TMEM243Q9BU79 118 aa9.76□□□□□ -0.85
SF1-202ENST00000334944 FLNBO75369 2602 aaKnown RBP9.76□□□□□ -0.85
SF1-202ENST00000334944 TRGV4A0A0C4DH28 118 aa9.76□□□□□ -0.85
SF1-202ENST00000334944 LY6G6DO95868 133 aa9.75□□□□□ -0.85
SF1-202ENST00000334944 TIMM17BO60830 172 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 CSNK1G2-AS1Q8NCQ2 148 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 LECT2O14960 151 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 DEFB4AO15263 64 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 Q6JHZ5 121 aa9.74□□□□□ -0.85
SF1-202ENST00000334944 A0A096LPF7 62 aa9.73□□□□□ -0.85
SF1-202ENST00000334944 TEP1Q99973 2627 aaKnown RBP9.73□□□□□ -0.85
SF1-202ENST00000334944 INAFM1C9JVW0 142 aa9.73□□□□□ -0.85
SF1-202ENST00000334944 UBE2L6O14933 153 aa9.73□□□□□ -0.85
SF1-202ENST00000334944 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
SF1-202ENST00000334944 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
SF1-202ENST00000334944 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
SF1-202ENST00000334944 ENHOQ6UWT2 76 aa9.72□□□□□ -0.85
SF1-202ENST00000334944 SMIM11BQ8TCY0 68 aa9.71□□□□□ -0.85
SF1-202ENST00000334944 CRPP02741 224 aa9.71□□□□□ -0.85
SF1-202ENST00000334944 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.85
SF1-202ENST00000334944 TRBV10-1A0A0K0K1A3 114 aa9.71□□□□□ -0.86
SF1-202ENST00000334944 MRAPQ8TCY5 172 aa9.71□□□□□ -0.86
SF1-202ENST00000334944 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.86
SF1-202ENST00000334944 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 FAM236DA0A1B0GTK5 79 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 FAM236CP0DP71 79 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 SNURFQ9Y675 71 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 MIR7-3HGQ8N6C7 128 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 IGKV2-28A0A075B6P5 120 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 IGKV2D-28P01615 120 aa9.69□□□□□ -0.86
SF1-202ENST00000334944 PRO0628Q9UI54 55 aa9.68□□□□□ -0.86
SF1-202ENST00000334944 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
SF1-202ENST00000334944 XCL1P47992 114 aa9.67□□□□□ -0.86
SF1-202ENST00000334944 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
SF1-202ENST00000334944 SND1-IT1Q9HBX3 110 aa9.67□□□□□ -0.86
SF1-202ENST00000334944 LINC00474Q9P2X8 69 aa9.67□□□□□ -0.86
SF1-202ENST00000334944 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
SF1-202ENST00000334944 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
SF1-202ENST00000334944 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
SF1-202ENST00000334944 F8P00451 2351 aa9.65□□□□□ -0.86
SF1-202ENST00000334944 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
SF1-202ENST00000334944 LINC00158P58513 81 aa9.65□□□□□ -0.86
SF1-202ENST00000334944 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
SF1-202ENST00000334944 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
SF1-202ENST00000334944 GYPEP15421 78 aa9.64□□□□□ -0.87
SF1-202ENST00000334944 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
SF1-202ENST00000334944 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
SF1-202ENST00000334944 RMI2Q96E14 147 aa9.63□□□□□ -0.87
SF1-202ENST00000334944 NDUFC2O95298 119 aa9.63□□□□□ -0.87
SF1-202ENST00000334944 BRK1Q8WUW1 75 aa9.63□□□□□ -0.87
SF1-202ENST00000334944 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
SF1-202ENST00000334944 H7BZZ5 65 aa9.62□□□□□ -0.87
SF1-202ENST00000334944 SS18Q15532 418 aa9.62□□□□□ -0.87
SF1-202ENST00000334944 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
SF1-202ENST00000334944 Q8N3U1 123 aa9.62□□□□□ -0.87
SF1-202ENST00000334944 X6R8D5 127 aa9.62□□□□□ -0.87
SF1-202ENST00000334944 PAX4O43316 350 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms