RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 MRPL23Q16540 153 aaKnown RBP16.2■□□□□ 0.18
NDEL1-201ENST00000334527 SMIM11BQ8TCY0 68 aa16.2■□□□□ 0.18
NDEL1-201ENST00000334527 PAX4O43316 350 aa16.2■□□□□ 0.18
NDEL1-201ENST00000334527 Q6Q795 121 aa16.19■□□□□ 0.18
NDEL1-201ENST00000334527 Q9HAA7 133 aa16.19■□□□□ 0.18
NDEL1-201ENST00000334527 VWFP04275 2813 aa16.18■□□□□ 0.18
NDEL1-201ENST00000334527 TRAV26-1A0A087WT03 109 aa16.18■□□□□ 0.18
NDEL1-201ENST00000334527 DEFB4AO15263 64 aa16.18■□□□□ 0.18
NDEL1-201ENST00000334527 C9orf66Q5T8R8 295 aa16.18■□□□□ 0.18
NDEL1-201ENST00000334527 C22orf24Q9Y442 160 aa16.18■□□□□ 0.18
NDEL1-201ENST00000334527 LYRM9A8MSI8 78 aa16.17■□□□□ 0.18
NDEL1-201ENST00000334527 DEFB135Q30KP9 77 aa16.17■□□□□ 0.18
NDEL1-201ENST00000334527 NDUFV3P56181 108 aaKnown RBP16.16■□□□□ 0.18
NDEL1-201ENST00000334527 Q8IZM0 81 aa16.15■□□□□ 0.18
NDEL1-201ENST00000334527 ACYP1P07311 99 aa16.14■□□□□ 0.17
NDEL1-201ENST00000334527 A0A087WYN8 130 aa16.13■□□□□ 0.17
NDEL1-201ENST00000334527 NHLRC4P0CG21 123 aaPredicted RBP16.13■□□□□ 0.17
NDEL1-201ENST00000334527 LINC00269Q8N2A0 174 aa16.13■□□□□ 0.17
NDEL1-201ENST00000334527 OR13C6PQ8NH95 151 aa16.13■□□□□ 0.17
NDEL1-201ENST00000334527 MALP21145 153 aa16.12■□□□□ 0.17
NDEL1-201ENST00000334527 KMT2BQ9UMN6 2715 aaPredicted RBP16.12■□□□□ 0.17
NDEL1-201ENST00000334527 DNAL4O96015 105 aa16.11■□□□□ 0.17
NDEL1-201ENST00000334527 IGHV4-28A0A0C4DH34 117 aa16.1■□□□□ 0.17
NDEL1-201ENST00000334527 H0YGX0 51 aa16.1■□□□□ 0.17
NDEL1-201ENST00000334527 LINC01561Q8N1V8 128 aa16.1■□□□□ 0.17
NDEL1-201ENST00000334527 INAFM1C9JVW0 142 aa16.09■□□□□ 0.17
NDEL1-201ENST00000334527 APOC4P55056 127 aa16.09■□□□□ 0.17
NDEL1-201ENST00000334527 DAD1P61803 113 aa16.08■□□□□ 0.17
NDEL1-201ENST00000334527 Q8N3U1 123 aa16.08■□□□□ 0.17
NDEL1-201ENST00000334527 CD164L2Q6UWJ8 174 aa16.07■□□□□ 0.16
NDEL1-201ENST00000334527 ANGP03950 147 aaKnown RBP16.07■□□□□ 0.16
NDEL1-201ENST00000334527 ATP5G1P05496 136 aa16.07■□□□□ 0.16
NDEL1-201ENST00000334527 INAFM2P0DMQ5 153 aa16.07■□□□□ 0.16
NDEL1-201ENST00000334527 IGLV10-54A0A075B6I4 117 aa16.06■□□□□ 0.16
NDEL1-201ENST00000334527 CHCHD10Q8WYQ3 142 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-201ENST00000334527 SMCR5Q8TEV8 140 aa16.06■□□□□ 0.16
NDEL1-201ENST00000334527 CELA1Q9UNI1 258 aa16.05■□□□□ 0.16
NDEL1-201ENST00000334527 TRBV7-7A0A0K0K1E9 115 aa16.05■□□□□ 0.16
NDEL1-201ENST00000334527 REG3AQ06141 175 aa16.05■□□□□ 0.16
NDEL1-201ENST00000334527 LECT2O14960 151 aa16.04■□□□□ 0.16
NDEL1-201ENST00000334527 KIAA0087Q14695 138 aa16.04■□□□□ 0.16
NDEL1-201ENST00000334527 CFAP161Q6P656 301 aa16.04■□□□□ 0.16
NDEL1-201ENST00000334527 OTOGQ6ZRI0 2925 aa16.02■□□□□ 0.16
NDEL1-201ENST00000334527 GAGE2AQ6NT46 116 aa16.02■□□□□ 0.15
NDEL1-201ENST00000334527 Q8NAQ8 132 aa16.02■□□□□ 0.15
NDEL1-201ENST00000334527 TENM1Q9UKZ4 2725 aa16.02■□□□□ 0.15
NDEL1-201ENST00000334527 HECTD1Q9ULT8 2610 aa16■□□□□ 0.15
NDEL1-201ENST00000334527 CXCL5P42830 114 aa16■□□□□ 0.15
NDEL1-201ENST00000334527 PRR3P79522 188 aaKnown RBP16■□□□□ 0.15
NDEL1-201ENST00000334527 MIFP14174 115 aa15.99■□□□□ 0.15
NDEL1-201ENST00000334527 C9orf129Q5T035 196 aaKnown RBP15.99■□□□□ 0.15
NDEL1-201ENST00000334527 LINC00643Q86TS7 51 aa15.99■□□□□ 0.15
NDEL1-201ENST00000334527 HTN3P15516 51 aa15.99■□□□□ 0.15
NDEL1-201ENST00000334527 COX17Q14061 63 aa15.99■□□□□ 0.15
NDEL1-201ENST00000334527 SDIM1Q6ZPB5 146 aa15.98■□□□□ 0.15
NDEL1-201ENST00000334527 SLPIP03973 132 aa15.97■□□□□ 0.15
NDEL1-201ENST00000334527 C9orf116Q5BN46 136 aaPredicted RBP15.97■□□□□ 0.15
NDEL1-201ENST00000334527 NSD1Q96L73 2696 aaPredicted RBP15.96■□□□□ 0.15
NDEL1-201ENST00000334527 SPART-AS1P0CW21 52 aa15.95■□□□□ 0.14
NDEL1-201ENST00000334527 C14orf132Q9NPU4 83 aa15.95■□□□□ 0.14
NDEL1-201ENST00000334527 IMUPQ9GZP8 106 aa15.95■□□□□ 0.14
NDEL1-201ENST00000334527 NOTCH2Q04721 2471 aa15.95■□□□□ 0.14
NDEL1-201ENST00000334527 CCDC179H3BU77 68 aa15.94■□□□□ 0.14
NDEL1-201ENST00000334527 NDUFC2O95298 119 aa15.94■□□□□ 0.14
NDEL1-201ENST00000334527 NANOS2P60321 138 aaKnown RBP15.94■□□□□ 0.14
NDEL1-201ENST00000334527 OBSCN-AS1Q96MR7 158 aa15.93■□□□□ 0.14
NDEL1-201ENST00000334527 B5MCH6 92 aa15.93■□□□□ 0.14
NDEL1-201ENST00000334527 LELP1Q5T871 98 aa15.92■□□□□ 0.14
NDEL1-201ENST00000334527 ORMDL1Q9P0S3 153 aa15.92■□□□□ 0.14
NDEL1-201ENST00000334527 IGHV4-30-4P0DP06 118 aa15.91■□□□□ 0.14
NDEL1-201ENST00000334527 NCR3O14931 201 aa15.9■□□□□ 0.14
NDEL1-201ENST00000334527 TMEM126AQ9H061 195 aa15.9■□□□□ 0.14
NDEL1-201ENST00000334527 FAM236AA0A1B0GUQ0 79 aa15.9■□□□□ 0.14
NDEL1-201ENST00000334527 FAM236BA0A1B0GV22 79 aa15.9■□□□□ 0.14
NDEL1-201ENST00000334527 C6orf223Q8N319 242 aa15.89■□□□□ 0.13
NDEL1-201ENST00000334527 KLK5Q9Y337 293 aaPredicted RBP15.89■□□□□ 0.13
NDEL1-201ENST00000334527 SPAG11BQ08648 103 aa15.88■□□□□ 0.13
NDEL1-201ENST00000334527 C10orf25Q5T742 122 aa15.87■□□□□ 0.13
NDEL1-201ENST00000334527 Q8NDZ9 215 aa15.87■□□□□ 0.13
NDEL1-201ENST00000334527 KLK12Q9UKR0 248 aa15.87■□□□□ 0.13
NDEL1-201ENST00000334527 UNQ6190/PRO20217Q6UXQ8 127 aa15.87■□□□□ 0.13
NDEL1-201ENST00000334527 Q8N814 137 aa15.86■□□□□ 0.13
NDEL1-201ENST00000334527 LINC00526Q96FQ7 95 aa15.86■□□□□ 0.13
NDEL1-201ENST00000334527 LINC00167Q96N53 147 aa15.86■□□□□ 0.13
NDEL1-201ENST00000334527 ATRQ13535 2644 aa15.86■□□□□ 0.13
NDEL1-201ENST00000334527 WFDC9Q8NEX5 89 aa15.85■□□□□ 0.13
NDEL1-201ENST00000334527 A0A1B0GX51 115 aa15.85■□□□□ 0.13
NDEL1-201ENST00000334527 PRR34Q9NV39 138 aa15.84■□□□□ 0.13
NDEL1-201ENST00000334527 SS18L2Q9UHA2 77 aa15.84■□□□□ 0.13
NDEL1-201ENST00000334527 TEP1Q99973 2627 aaKnown RBP15.84■□□□□ 0.13
NDEL1-201ENST00000334527 TRRAPQ9Y4A5 3859 aa15.83■□□□□ 0.12
NDEL1-201ENST00000334527 CYSRT1A8MQ03 144 aa15.83■□□□□ 0.12
NDEL1-201ENST00000334527 S100A7L2Q5SY68 101 aa15.82■□□□□ 0.12
NDEL1-201ENST00000334527 C6orf99Q4VX62 202 aa15.82■□□□□ 0.12
NDEL1-201ENST00000334527 ENHOQ6UWT2 76 aa15.82■□□□□ 0.12
NDEL1-201ENST00000334527 WIPF1O43516 503 aa15.8■□□□□ 0.12
NDEL1-201ENST00000334527 LINC00846Q9NV44 126 aa15.8■□□□□ 0.12
NDEL1-201ENST00000334527 LYPD5Q6UWN5 251 aa15.8■□□□□ 0.12
NDEL1-201ENST00000334527 HIVEP1P15822 2718 aa15.8■□□□□ 0.12
NDEL1-201ENST00000334527 A0A0J9YWU9 116 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms