RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
PTCH1-201ENST00000331920 ZNF702PQ9H963 129 aa11.87□□□□□ -0.51
PTCH1-201ENST00000331920 FSTL3O95633 263 aa11.86□□□□□ -0.51
PTCH1-201ENST00000331920 C1orf134Q5TEV5 83 aa11.85□□□□□ -0.51
PTCH1-201ENST00000331920 C1orf229Q6ZS94 237 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-201ENST00000331920 ZFHX2Q9C0A1 2572 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-201ENST00000331920 ATP11AUNQ6ZP68 121 aa11.84□□□□□ -0.51
PTCH1-201ENST00000331920 Q8NA96 180 aa11.84□□□□□ -0.51
PTCH1-201ENST00000331920 LINC01006Q8NI28 216 aa11.84□□□□□ -0.51
PTCH1-201ENST00000331920 SMR3AQ99954 134 aa11.84□□□□□ -0.51
PTCH1-201ENST00000331920 TMEM254Q8TBM7 123 aa11.83□□□□□ -0.52
PTCH1-201ENST00000331920 Q8N6K4 173 aa11.83□□□□□ -0.52
PTCH1-201ENST00000331920 Q6ZTC4 211 aa11.82□□□□□ -0.52
PTCH1-201ENST00000331920 EGFEM1PQ0D2K5 195 aa11.82□□□□□ -0.52
PTCH1-201ENST00000331920 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
PTCH1-201ENST00000331920 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
PTCH1-201ENST00000331920 IGLV4-60A0A075B6I1 120 aa11.8□□□□□ -0.52
PTCH1-201ENST00000331920 PRORYQ9H606 182 aa11.8□□□□□ -0.52
PTCH1-201ENST00000331920 PSMG3-AS1Q96PY0 264 aa11.79□□□□□ -0.52
PTCH1-201ENST00000331920 EDN2P20800 178 aa11.79□□□□□ -0.52
PTCH1-201ENST00000331920 MOBPQ13875 183 aa11.78□□□□□ -0.52
PTCH1-201ENST00000331920 MYO18BQ8IUG5 2567 aa11.77□□□□□ -0.52
PTCH1-201ENST00000331920 C8orf87E5RJ46 101 aa11.77□□□□□ -0.52
PTCH1-201ENST00000331920 LINC00242Q5T6M2 205 aa11.77□□□□□ -0.53
PTCH1-201ENST00000331920 TTC28Q96AY4 2481 aa11.77□□□□□ -0.53
PTCH1-201ENST00000331920 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
PTCH1-201ENST00000331920 C11orf21Q9P2W6 132 aa11.76□□□□□ -0.53
PTCH1-201ENST00000331920 YPEL4Q96NS1 127 aa11.76□□□□□ -0.53
PTCH1-201ENST00000331920 C2CD3Q4AC94 2353 aa11.76□□□□□ -0.53
PTCH1-201ENST00000331920 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
PTCH1-201ENST00000331920 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
PTCH1-201ENST00000331920 FBXL19-AS1Q494R0 122 aa11.75□□□□□ -0.53
PTCH1-201ENST00000331920 MUC7Q8TAX7 377 aa11.74□□□□□ -0.53
PTCH1-201ENST00000331920 ADAMTSL4-AS1Q5T5F5 129 aa11.74□□□□□ -0.53
PTCH1-201ENST00000331920 C4orf26Q17RF5 130 aa11.74□□□□□ -0.53
PTCH1-201ENST00000331920 A0A1W2PNU3 283 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-201ENST00000331920 KLLNB2CW77 178 aa11.73□□□□□ -0.53
PTCH1-201ENST00000331920 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
PTCH1-201ENST00000331920 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
PTCH1-201ENST00000331920 BRWD1-AS2P59051 145 aa11.73□□□□□ -0.53
PTCH1-201ENST00000331920 ZNF580Q9UK33 172 aa11.72□□□□□ -0.53
PTCH1-201ENST00000331920 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
PTCH1-201ENST00000331920 NOTCH2Q04721 2471 aa11.72□□□□□ -0.53
PTCH1-201ENST00000331920 P0C879 139 aa11.72□□□□□ -0.53
PTCH1-201ENST00000331920 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.53
PTCH1-201ENST00000331920 CXCL6P80162 114 aa11.7□□□□□ -0.54
PTCH1-201ENST00000331920 IGIPA6NJ69 53 aa11.7□□□□□ -0.54
PTCH1-201ENST00000331920 LINC00846Q9NV44 126 aa11.7□□□□□ -0.54
PTCH1-201ENST00000331920 TSPEAR-AS2P59090 65 aa11.7□□□□□ -0.54
PTCH1-201ENST00000331920 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
PTCH1-201ENST00000331920 KIAA0087Q14695 138 aa11.69□□□□□ -0.54
PTCH1-201ENST00000331920 PRO0628Q9UI54 55 aa11.67□□□□□ -0.54
PTCH1-201ENST00000331920 CHCHD7Q9BUK0 85 aa11.67□□□□□ -0.54
PTCH1-201ENST00000331920 LINC00313P59037 77 aa11.67□□□□□ -0.54
PTCH1-201ENST00000331920 Q6ZRU5 148 aa11.67□□□□□ -0.54
PTCH1-201ENST00000331920 C22orf24Q9Y442 160 aa11.66□□□□□ -0.54
PTCH1-201ENST00000331920 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
PTCH1-201ENST00000331920 FHL2Q14192 279 aa11.65□□□□□ -0.54
PTCH1-201ENST00000331920 LINC00574Q9H8X3 128 aa11.65□□□□□ -0.54
PTCH1-201ENST00000331920 ANKHD1Q8IWZ3 2542 aaKnown RBP11.65□□□□□ -0.55
PTCH1-201ENST00000331920 LRRK2Q5S007 2527 aa11.64□□□□□ -0.55
PTCH1-201ENST00000331920 MDFIQ99750 246 aa11.64□□□□□ -0.55
PTCH1-201ENST00000331920 CACNA1AO00555 2505 aa11.63□□□□□ -0.55
PTCH1-201ENST00000331920 Q6ZPA2 131 aa11.63□□□□□ -0.55
PTCH1-201ENST00000331920 Q96NJ1 140 aa11.63□□□□□ -0.55
PTCH1-201ENST00000331920 CUL9Q8IWT3 2517 aa11.63□□□□□ -0.55
PTCH1-201ENST00000331920 EIF4EBP1Q13541 118 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-201ENST00000331920 COX6B2Q6YFQ2 88 aa11.61□□□□□ -0.55
PTCH1-201ENST00000331920 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
PTCH1-201ENST00000331920 C11orf71Q6IPW1 123 aa11.61□□□□□ -0.55
PTCH1-201ENST00000331920 ACACBO00763 2458 aa11.61□□□□□ -0.55
PTCH1-201ENST00000331920 CRIPTQ9P021 101 aa11.61□□□□□ -0.55
PTCH1-201ENST00000331920 TP53AIP1Q9HCN2 124 aa11.61□□□□□ -0.55
PTCH1-201ENST00000331920 TYMSOSQ8TAI1 123 aa11.6□□□□□ -0.55
PTCH1-201ENST00000331920 IGLV1-40P01703 118 aa11.59□□□□□ -0.55
PTCH1-201ENST00000331920 Q6ZSN1 163 aa11.59□□□□□ -0.55
PTCH1-201ENST00000331920 RPL37AP61513 92 aaKnown RBP11.58□□□□□ -0.55
PTCH1-201ENST00000331920 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
PTCH1-201ENST00000331920 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
PTCH1-201ENST00000331920 F8P00451 2351 aa11.56□□□□□ -0.56
PTCH1-201ENST00000331920 Q8N2B8 174 aa11.56□□□□□ -0.56
PTCH1-201ENST00000331920 COL4A3Q01955 1670 aa11.56□□□□□ -0.56
PTCH1-201ENST00000331920 ACANP16112 2415 aa11.55□□□□□ -0.56
PTCH1-201ENST00000331920 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
PTCH1-201ENST00000331920 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
PTCH1-201ENST00000331920 J3QL48 77 aa11.53□□□□□ -0.56
PTCH1-201ENST00000331920 SRCAPQ6ZRS2 3230 aa11.53□□□□□ -0.56
PTCH1-201ENST00000331920 TRAV22A0A0B4J277 110 aa11.52□□□□□ -0.57
PTCH1-201ENST00000331920 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
PTCH1-201ENST00000331920 COL4A4P53420 1690 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-201ENST00000331920 COL27A1Q8IZC6 1860 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-201ENST00000331920 F8WDY8 70 aa11.51□□□□□ -0.57
PTCH1-201ENST00000331920 C9orf129Q5T035 196 aaKnown RBP11.49□□□□□ -0.57
PTCH1-201ENST00000331920 IGLV1-51P01701 117 aa11.49□□□□□ -0.57
PTCH1-201ENST00000331920 AMELXQ99217 191 aa11.48□□□□□ -0.57
PTCH1-201ENST00000331920 LINC01554Q52M75 96 aa11.48□□□□□ -0.57
PTCH1-201ENST00000331920 AVPP01185 164 aa11.48□□□□□ -0.57
PTCH1-201ENST00000331920 CNFNQ9BYD5 112 aa11.48□□□□□ -0.57
PTCH1-201ENST00000331920 C16orf90A8MZG2 172 aa11.47□□□□□ -0.57
PTCH1-201ENST00000331920 A0A1B0GUV1 79 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms