RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CHCHD10Q8WYQ3 142 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-201ENST00000329399 DYNC1H1Q14204 4646 aaKnown RBP11.05□□□□□ -0.64
PDLIM1-201ENST00000329399 A0A1B0GVY2 172 aa11.05□□□□□ -0.64
PDLIM1-201ENST00000329399 COX7A2LO14548 114 aa11.05□□□□□ -0.64
PDLIM1-201ENST00000329399 DNAH10OSP0CZ25 163 aa11.05□□□□□ -0.64
PDLIM1-201ENST00000329399 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
PDLIM1-201ENST00000329399 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
PDLIM1-201ENST00000329399 APOMO95445 188 aa11.04□□□□□ -0.64
PDLIM1-201ENST00000329399 WFDC10BQ8IUB3 73 aa11.04□□□□□ -0.64
PDLIM1-201ENST00000329399 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
PDLIM1-201ENST00000329399 XCL1P47992 114 aa11.03□□□□□ -0.64
PDLIM1-201ENST00000329399 PTTG1IPP53801 180 aa11.03□□□□□ -0.64
PDLIM1-201ENST00000329399 Q8IZM0 81 aa11.03□□□□□ -0.64
PDLIM1-201ENST00000329399 C10orf126Q8N4M7 172 aa11.03□□□□□ -0.64
PDLIM1-201ENST00000329399 PPDPFQ9H3Y8 114 aa11.03□□□□□ -0.64
PDLIM1-201ENST00000329399 IFITM1P13164 125 aa11.02□□□□□ -0.65
PDLIM1-201ENST00000329399 CXCL5P42830 114 aa11.02□□□□□ -0.65
PDLIM1-201ENST00000329399 ZNF625Q96I27 306 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1-201ENST00000329399 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.65
PDLIM1-201ENST00000329399 SPANXCQ9NY87 97 aa11.02□□□□□ -0.65
PDLIM1-201ENST00000329399 PRSS2P07478 247 aa11.01□□□□□ -0.65
PDLIM1-201ENST00000329399 TNP2Q05952 138 aa11.01□□□□□ -0.65
PDLIM1-201ENST00000329399 ENHOQ6UWT2 76 aa11.01□□□□□ -0.65
PDLIM1-201ENST00000329399 LINC00336Q6ZUF6 198 aa11.01□□□□□ -0.65
PDLIM1-201ENST00000329399 C5orf38Q86SI9 138 aa11.01□□□□□ -0.65
PDLIM1-201ENST00000329399 C6orf223Q8N319 242 aa11.01□□□□□ -0.65
PDLIM1-201ENST00000329399 IGHV3-30P01768 117 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 IGHV3-33P01772 117 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 IGHV3-30-5P0DP03 117 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 MALP21145 153 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
PDLIM1-201ENST00000329399 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 SMIM13P0DJ93 91 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 FOXI1Q12951 378 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 C6orf226Q5I0X4 101 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
PDLIM1-201ENST00000329399 UBE2WQ96B02 151 aa10.99□□□□□ -0.65
PDLIM1-201ENST00000329399 DNAH5Q8TE73 4624 aa10.98□□□□□ -0.65
PDLIM1-201ENST00000329399 A0A1B0GWB2 263 aa10.98□□□□□ -0.65
PDLIM1-201ENST00000329399 Q8N3U1 123 aa10.98□□□□□ -0.65
PDLIM1-201ENST00000329399 LRP1BQ9NZR2 4599 aa10.98□□□□□ -0.65
PDLIM1-201ENST00000329399 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
PDLIM1-201ENST00000329399 FXYD2P54710 66 aa10.97□□□□□ -0.65
PDLIM1-201ENST00000329399 RMI2Q96E14 147 aa10.97□□□□□ -0.65
PDLIM1-201ENST00000329399 LITAFQ99732 161 aa10.97□□□□□ -0.65
PDLIM1-201ENST00000329399 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
PDLIM1-201ENST00000329399 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
PDLIM1-201ENST00000329399 F8WDY8 70 aa10.96□□□□□ -0.65
PDLIM1-201ENST00000329399 CFAP161Q6P656 301 aa10.96□□□□□ -0.65
PDLIM1-201ENST00000329399 Q6ZRN7 208 aaPredicted RBP10.96□□□□□ -0.65
PDLIM1-201ENST00000329399 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
PDLIM1-201ENST00000329399 TTC32Q5I0X7 151 aa10.95□□□□□ -0.66
PDLIM1-201ENST00000329399 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
PDLIM1-201ENST00000329399 HERC2O95714 4834 aa10.94□□□□□ -0.66
PDLIM1-201ENST00000329399 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
PDLIM1-201ENST00000329399 CKS1BP61024 79 aa10.94□□□□□ -0.66
PDLIM1-201ENST00000329399 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
PDLIM1-201ENST00000329399 COX11Q9Y6N1 276 aa10.94□□□□□ -0.66
PDLIM1-201ENST00000329399 TAX1BP3O14907 124 aa10.93□□□□□ -0.66
PDLIM1-201ENST00000329399 COX17Q14061 63 aa10.93□□□□□ -0.66
PDLIM1-201ENST00000329399 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-201ENST00000329399 KIAA0087Q14695 138 aa10.92□□□□□ -0.66
PDLIM1-201ENST00000329399 MUSTN1Q8IVN3 82 aa10.92□□□□□ -0.66
PDLIM1-201ENST00000329399 C9orf118A6NHY6 69 aa10.91□□□□□ -0.66
PDLIM1-201ENST00000329399 A0A0B4J2C4 111 aa10.9□□□□□ -0.66
PDLIM1-201ENST00000329399 A0A1B0GV90 55 aa10.9□□□□□ -0.66
PDLIM1-201ENST00000329399 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
PDLIM1-201ENST00000329399 KRTAP26-1Q6PEX3 210 aa10.9□□□□□ -0.66
PDLIM1-201ENST00000329399 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
PDLIM1-201ENST00000329399 SPAG11BQ08648 103 aa10.88□□□□□ -0.67
PDLIM1-201ENST00000329399 RYR1P21817 5038 aa10.88□□□□□ -0.67
PDLIM1-201ENST00000329399 GVQW2A0A096LPI5 108 aaPredicted RBP10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 A4D1N5 150 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 KRTAP10-2P60368 255 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 C2orf48Q96LS8 159 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 ERG28Q9UKR5 140 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 IGKV2D-24A0A075B6R9 120 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 RAB37Q96AX2 223 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
PDLIM1-201ENST00000329399 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
PDLIM1-201ENST00000329399 CFC1BP0CG36 223 aa10.86□□□□□ -0.67
PDLIM1-201ENST00000329399 CFC1P0CG37 223 aa10.86□□□□□ -0.67
PDLIM1-201ENST00000329399 LINC00158P58513 81 aa10.86□□□□□ -0.67
PDLIM1-201ENST00000329399 LOC107984156A0A0G2JMH3 177 aa10.85□□□□□ -0.67
PDLIM1-201ENST00000329399 ARL17AQ8IVW1 177 aa10.85□□□□□ -0.67
PDLIM1-201ENST00000329399 NTN5Q8WTR8 489 aaPredicted RBP10.85□□□□□ -0.67
PDLIM1-201ENST00000329399 APOBP04114 4563 aaKnown RBP10.85□□□□□ -0.67
PDLIM1-201ENST00000329399 HSPG2P98160 4391 aa10.84□□□□□ -0.67
PDLIM1-201ENST00000329399 TRBV30A0A0K0K1B3 111 aa10.84□□□□□ -0.67
PDLIM1-201ENST00000329399 LYRM7Q5U5X0 104 aa10.84□□□□□ -0.67
PDLIM1-201ENST00000329399 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
PDLIM1-201ENST00000329399 Q9HAA7 133 aa10.83□□□□□ -0.68
PDLIM1-201ENST00000329399 FABP2P12104 132 aa10.82□□□□□ -0.68
PDLIM1-201ENST00000329399 A0A1W2PPM0 123 aa10.81□□□□□ -0.68
PDLIM1-201ENST00000329399 VAMP3Q15836 100 aa10.81□□□□□ -0.68
PDLIM1-201ENST00000329399 H3BUT2 72 aa10.81□□□□□ -0.68
PDLIM1-201ENST00000329399 K7ERJ3 54 aa10.81□□□□□ -0.68
PDLIM1-201ENST00000329399 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
PDLIM1-201ENST00000329399 GTF2H5Q6ZYL4 71 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms