RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LMO4P61968 165 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 STHQ8IWL8 128 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 RHPN1-AS1Q9BWJ2 59 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 RBM12B-AS1Q9P1G2 102 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 LAMTOR3Q9UHA4 124 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 POLQO75417 2590 aa8.39□□□□□ -1.07
SHMT2-201ENST00000328923 IGHV3-38A0A0C4DH36 116 aa8.38□□□□□ -1.07
SHMT2-201ENST00000328923 SORL1Q92673 2214 aa8.38□□□□□ -1.07
SHMT2-201ENST00000328923 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
SHMT2-201ENST00000328923 IGLV5-45A0A087WSX0 123 aa8.38□□□□□ -1.07
SHMT2-201ENST00000328923 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 LINC01547P58512 204 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-201ENST00000328923 HAMPP81172 84 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 K7EMT4 169 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
SHMT2-201ENST00000328923 ANKRD17O75179 2603 aaKnown RBP8.36□□□□□ -1.07
SHMT2-201ENST00000328923 CCL19Q99731 98 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 CHCHD7Q9BUK0 85 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 Q9UF83 564 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 PROK1P58294 105 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 Q8N3U1 123 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 LINC00467Q9BRT7 94 aa8.36□□□□□ -1.07
SHMT2-201ENST00000328923 JMJD7-PLA2G4BH0Y9G9 81 aa8.35□□□□□ -1.07
SHMT2-201ENST00000328923 A8MU10 97 aa8.35□□□□□ -1.07
SHMT2-201ENST00000328923 PSPHP1O15172 72 aa8.35□□□□□ -1.07
SHMT2-201ENST00000328923 FUSP35637 526 aaKnown RBP eCLIP8.35□□□□□ -1.07
SHMT2-201ENST00000328923 Q6ZTC4 211 aa8.35□□□□□ -1.07
SHMT2-201ENST00000328923 C2CD3Q4AC94 2353 aa8.35□□□□□ -1.07
SHMT2-201ENST00000328923 FBN2P35556 2912 aa8.35□□□□□ -1.07
SHMT2-201ENST00000328923 CCDC168Q8NDH2 2452 aa8.34□□□□□ -1.07
SHMT2-201ENST00000328923 F8P00451 2351 aa8.34□□□□□ -1.07
SHMT2-201ENST00000328923 Q6ZRP5 223 aa8.34□□□□□ -1.07
SHMT2-201ENST00000328923 NREPQ16612 68 aa8.34□□□□□ -1.07
SHMT2-201ENST00000328923 M0R2N4 97 aa8.33□□□□□ -1.08
SHMT2-201ENST00000328923 PDZD2O15018 2839 aa8.33□□□□□ -1.08
SHMT2-201ENST00000328923 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
SHMT2-201ENST00000328923 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
SHMT2-201ENST00000328923 C11orf68Q9H3H3 251 aaKnown RBP8.33□□□□□ -1.08
SHMT2-201ENST00000328923 IGHV3OR16-12A0A075B7B8 117 aa8.32□□□□□ -1.08
SHMT2-201ENST00000328923 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
SHMT2-201ENST00000328923 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
SHMT2-201ENST00000328923 PRYO14603 147 aa8.31□□□□□ -1.08
SHMT2-201ENST00000328923 Q6ZVQ6 151 aa8.31□□□□□ -1.08
SHMT2-201ENST00000328923 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-201ENST00000328923 IGHV3-11P01762 117 aa8.31□□□□□ -1.08
SHMT2-201ENST00000328923 K7EQG2 157 aa8.3□□□□□ -1.08
SHMT2-201ENST00000328923 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
SHMT2-201ENST00000328923 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
SHMT2-201ENST00000328923 Q1T7F1 81 aa8.3□□□□□ -1.08
SHMT2-201ENST00000328923 DYNLRB2Q8TF09 96 aa8.3□□□□□ -1.08
SHMT2-201ENST00000328923 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
SHMT2-201ENST00000328923 HIVEP1P15822 2718 aa8.29□□□□□ -1.08
SHMT2-201ENST00000328923 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
SHMT2-201ENST00000328923 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
SHMT2-201ENST00000328923 KTN1-AS1Q86SY8 53 aa8.29□□□□□ -1.08
SHMT2-201ENST00000328923 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 CCL18P55774 89 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 DGAT2L7PQ6IED9 249 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 UBE2E2Q96LR5 201 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 SPINK13Q1W4C9 94 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 Q6ZQT0 140 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
SHMT2-201ENST00000328923 MTORP42345 2549 aa8.27□□□□□ -1.08
SHMT2-201ENST00000328923 TMEM256-PLSCR3K7ERE1 68 aa8.27□□□□□ -1.09
SHMT2-201ENST00000328923 IGKV3-20P01619 116 aa8.27□□□□□ -1.09
SHMT2-201ENST00000328923 APOC4P55056 127 aa8.27□□□□□ -1.09
SHMT2-201ENST00000328923 BPY2O14599 106 aa8.26□□□□□ -1.09
SHMT2-201ENST00000328923 LINC00158P58513 81 aa8.26□□□□□ -1.09
SHMT2-201ENST00000328923 BRD3OSQ6XYD6 125 aa8.26□□□□□ -1.09
SHMT2-201ENST00000328923 Q6ZSN1 163 aa8.26□□□□□ -1.09
SHMT2-201ENST00000328923 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■■■■□ 25.4
SHMT2-201ENST00000328923 TRAV22A0A0B4J277 110 aa8.26□□□□□ -1.09
SHMT2-201ENST00000328923 Q8N814 137 aa8.26□□□□□ -1.09
SHMT2-201ENST00000328923 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 MSMBP08118 114 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 CXCL6P80162 114 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 ITPR3Q14573 2671 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 A6NDX4 124 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 HIGD2AQ9BW72 106 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
SHMT2-201ENST00000328923 ZNF469Q96JG9 3925 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-201ENST00000328923 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
SHMT2-201ENST00000328923 IGHV4-38-2P0DP08 117 aa8.24□□□□□ -1.09
SHMT2-201ENST00000328923 M0R378 163 aa8.24□□□□□ -1.09
SHMT2-201ENST00000328923 A0A096LNT2 108 aa8.23□□□□□ -1.09
SHMT2-201ENST00000328923 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
SHMT2-201ENST00000328923 DSCR9P59020 149 aa8.23□□□□□ -1.09
SHMT2-201ENST00000328923 NF1P21359 2839 aa8.23□□□□□ -1.09
SHMT2-201ENST00000328923 A8MTW9 85 aa8.23□□□□□ -1.09
SHMT2-201ENST00000328923 B4DSR2 109 aa8.23□□□□□ -1.09
SHMT2-201ENST00000328923 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms