RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 OR2T1O43869 369 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 PITX3O75364 302 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 HIST1H1BP16401 226 aaKnown RBP0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 UBE2D3P61077 147 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 UBE2D2P62837 147 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 ZNF846Q147U1 533 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 EIF5AL1Q6IS14 154 aaKnown RBP0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 C8orf59Q8N0T1 100 aaPredicted RBP0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 Q8N814 137 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 OR5D14Q8NGL3 314 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 AP3S1Q92572 193 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 KLK6Q92876 244 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 PBDC1Q9BVG4 233 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 POPDC3Q9HBV1 291 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 ENY2Q9NPA8 101 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 NIT2Q9NQR4 276 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 ORMDL1Q9P0S3 153 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 ERG28Q9UKR5 140 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 DSCAML1Q8TD84 2053 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 TEX49A0A1B0GTD5 131 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 APOC1P02654 83 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 SUPT4H1P63272 117 aaKnown RBP0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 DCUN1D2Q6PH85 259 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 Q8N2B8 174 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 TCTEX1D1Q8N7M0 179 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 OR10J5Q8NHC4 309 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 COPS9Q8WXC6 57 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 RAB37Q96AX2 223 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 GSKIPQ9P0R6 139 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 LAMTOR2Q9Y2Q5 125 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 LSM2Q9Y333 95 aaKnown RBP0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 UTP11Q9Y3A2 253 aaKnown RBP0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 LINC00312Q9Y6C7 94 aa0.37□□□□□ -2.35
CCDC144A-201ENST00000328495 LOC110117498A0A087WWA1 95 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 TRAV12-1A0A0B4J245 112 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 ODAMA1E959 279 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 NAP1L6A6NFF2 107 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 OR4C46A6NHA9 309 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 SIX6O95475 246 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 POLR2HP52434 150 aaKnown RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 OR8B8Q15620 311 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 C9orf116Q5BN46 136 aaPredicted RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 AKR1C8PQ5T2L2 129 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 SOSTDC1Q6X4U4 206 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 H1FXQ92522 213 aaKnown RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 MUCL1Q96DR8 90 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 GINS3Q9BRX5 216 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 TAF9BQ9HBM6 251 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 ZFP30Q9Y2G7 519 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 HSPB11Q9Y547 144 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 LHFPL6Q9Y693 200 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 TRBV6-8A0A0A6YYG3 113 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 E7EQ34 232 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 TSTD3H0UI37 97 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 APOC4-APOC2K7ER74 178 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 DNAL4O96015 105 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 GNG4P50150 75 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 PKIAP61925 76 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 ZNF833PQ6ZTB9 187 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 OR8I2Q8N0Y5 310 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 ADAT3Q96EY9 351 aaPredicted RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 SIGMAR1Q99720 223 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 OTORQ9NRC9 128 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 CDC42SE1Q9NRR8 79 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 TRAV13-1A0A0B4J241 112 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 A0A0J9YY99 117 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 F8W1H4 67 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 KLF7O75840 302 aaPredicted RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 CD14P08571 375 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 IL7P13232 177 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 DSCR4P56555 118 aaPredicted RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 UBE2BP63146 152 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 INSL4Q14641 139 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 AKAP14Q86UN6 197 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 CTAGE3PQ8IX95 158 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 OR13C6PQ8NH95 151 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 PCBD2Q9H0N5 130 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 C11orf68Q9H3H3 251 aaKnown RBP0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 UBE2D4Q9Y2X8 147 aa0.36□□□□□ -2.35
CCDC144A-201ENST00000328495 IGHV1-58A0A0C4DH39 117 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 M0R233 179 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 NDUFB3O43676 98 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 CSN2P05814 226 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 FKBP2P26885 142 aaKnown RBP0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 SSR2P43308 183 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 RBP2P50120 134 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 LINC01554Q52M75 96 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 C1orf137Q5JT78 98 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 SFTA2Q6UW10 78 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 Q6ZQT0 140 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 OR4B1Q8NGF8 309 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 SPACA4Q8TDM5 124 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 ZC2HC1AQ96GY0 325 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 HYLS1Q96M11 299 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 TRAV12-2A0A075B6T6 113 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 TRAV1-2A0A0B4J238 106 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 BBIP1A8MTZ0 92 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 STATHP02808 62 aa0.35□□□□□ -2.35
CCDC144A-201ENST00000328495 ZNF25P17030 456 aaPredicted RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms