RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 LOC110117498A0A087WWA1 95 aa8.82□□□□□ -1
CCDC60-201ENST00000327554 C4orf3Q8WVX3 66 aa8.82□□□□□ -1
CCDC60-201ENST00000327554 RMI2Q96E14 147 aa8.82□□□□□ -1
CCDC60-201ENST00000327554 SNURFQ9Y675 71 aa8.82□□□□□ -1
CCDC60-201ENST00000327554 A0A1W2PRX2 142 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 KHDC1LQ5JSQ8 128 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 MUC6Q6W4X9 2439 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 MXRA5Q9NR99 2828 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 RBM3P98179 157 aaKnown RBP8.81□□□□□ -1
CCDC60-201ENST00000327554 C6orf99Q4VX62 202 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 Q6YL49 198 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 C11orf44Q8N8P7 122 aa8.81□□□□□ -1
CCDC60-201ENST00000327554 Q6ZVQ6 151 aa8.8□□□□□ -1
CCDC60-201ENST00000327554 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
CCDC60-201ENST00000327554 GIG44P09565 113 aaPredicted RBP8.8□□□□□ -1
CCDC60-201ENST00000327554 LINC00575Q6W349 94 aa8.8□□□□□ -1
CCDC60-201ENST00000327554 C6orf223Q8N319 242 aa8.8□□□□□ -1
CCDC60-201ENST00000327554 SMIM26A0A096LP01 95 aa8.79□□□□□ -1
CCDC60-201ENST00000327554 F8WEM9 126 aa8.79□□□□□ -1
CCDC60-201ENST00000327554 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
CCDC60-201ENST00000327554 Q8NDZ9 215 aa8.79□□□□□ -1
CCDC60-201ENST00000327554 ZANQ9Y493 2812 aa8.79□□□□□ -1
CCDC60-201ENST00000327554 LINC01356Q8N9X3 169 aa8.79□□□□□ -1
CCDC60-201ENST00000327554 NBPF19A0A087WUL8 3843 aa8.78□□□□□ -1
CCDC60-201ENST00000327554 HAMPP81172 84 aa8.78□□□□□ -1
CCDC60-201ENST00000327554 C16orf74Q96GX8 76 aa8.78□□□□□ -1
CCDC60-201ENST00000327554 AKAP9Q99996 3911 aa8.78□□□□□ -1
CCDC60-201ENST00000327554 PLA2G2AP14555 144 aa8.77□□□□□ -1.01
CCDC60-201ENST00000327554 CR1P17927 2039 aa8.77□□□□□ -1.01
CCDC60-201ENST00000327554 CHD6Q8TD26 2715 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 J3QLI3 93 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 GNLYP22749 145 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 CXCL6P80162 114 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 KIAA0087Q14695 138 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 FSHBP01225 129 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
CCDC60-201ENST00000327554 COX17Q14061 63 aa8.75□□□□□ -1.01
CCDC60-201ENST00000327554 SPATA3Q8NHX4 192 aa8.75□□□□□ -1.01
CCDC60-201ENST00000327554 CUBNO60494 3623 aa8.75□□□□□ -1.01
CCDC60-201ENST00000327554 MAPK1IP1LQ8NDC0 245 aa8.75□□□□□ -1.01
CCDC60-201ENST00000327554 WNK1Q9H4A3 2382 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
CCDC60-201ENST00000327554 C9orf66Q5T8R8 295 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 Q8N3U1 123 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 ZNF843Q8N446 348 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 TRBV7-6A0A0J9YX20 115 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
CCDC60-201ENST00000327554 WFDC11Q8NEX6 87 aa8.73□□□□□ -1.01
CCDC60-201ENST00000327554 A0A1B0GUV1 79 aa8.72□□□□□ -1.01
CCDC60-201ENST00000327554 NDUFC1O43677 76 aa8.72□□□□□ -1.01
CCDC60-201ENST00000327554 SETXQ7Z333 2677 aaKnown RBP8.72□□□□□ -1.01
CCDC60-201ENST00000327554 IGHV4-28A0A0C4DH34 117 aa8.72□□□□□ -1.01
CCDC60-201ENST00000327554 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
CCDC60-201ENST00000327554 DSCR9P59020 149 aa8.71□□□□□ -1.01
CCDC60-201ENST00000327554 CSNK1G2-AS1Q8NCQ2 148 aa8.71□□□□□ -1.01
CCDC60-201ENST00000327554 WFDC10AQ9H1F0 79 aa8.71□□□□□ -1.01
CCDC60-201ENST00000327554 ITPR1Q14643 2758 aa8.71□□□□□ -1.02
CCDC60-201ENST00000327554 PDE6GP18545 87 aa8.71□□□□□ -1.02
CCDC60-201ENST00000327554 Q6ZQY7 126 aa8.71□□□□□ -1.02
CCDC60-201ENST00000327554 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
CCDC60-201ENST00000327554 MYO9AB2RTY4 2548 aa8.7□□□□□ -1.02
CCDC60-201ENST00000327554 ATP5EP56381 51 aaPredicted RBP8.7□□□□□ -1.02
CCDC60-201ENST00000327554 MIFP14174 115 aa8.7□□□□□ -1.02
CCDC60-201ENST00000327554 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
CCDC60-201ENST00000327554 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-201ENST00000327554 LINC00269Q8N2A0 174 aa8.69□□□□□ -1.02
CCDC60-201ENST00000327554 JMJD1CQ15652 2540 aa8.69□□□□□ -1.02
CCDC60-201ENST00000327554 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
CCDC60-201ENST00000327554 TLN2Q9Y4G6 2542 aa8.68□□□□□ -1.02
CCDC60-201ENST00000327554 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
CCDC60-201ENST00000327554 IGLV6-57P01721 117 aa8.68□□□□□ -1.02
CCDC60-201ENST00000327554 GYPEP15421 78 aa8.68□□□□□ -1.02
CCDC60-201ENST00000327554 NREPQ16612 68 aa8.68□□□□□ -1.02
CCDC60-201ENST00000327554 FBN2P35556 2912 aa8.67□□□□□ -1.02
CCDC60-201ENST00000327554 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
CCDC60-201ENST00000327554 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
CCDC60-201ENST00000327554 CHCHD10Q8WYQ3 142 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-201ENST00000327554 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
CCDC60-201ENST00000327554 ANKRD17O75179 2603 aaKnown RBP8.66□□□□□ -1.02
CCDC60-201ENST00000327554 H3BQ85 93 aa8.65□□□□□ -1.02
CCDC60-201ENST00000327554 DEFB130BP0DP73 79 aa8.65□□□□□ -1.02
CCDC60-201ENST00000327554 DEFB130AP0DP74 79 aa8.65□□□□□ -1.02
CCDC60-201ENST00000327554 C10orf25Q5T742 122 aa8.65□□□□□ -1.02
CCDC60-201ENST00000327554 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.03
CCDC60-201ENST00000327554 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
CCDC60-201ENST00000327554 CCL24O00175 119 aa8.64□□□□□ -1.03
CCDC60-201ENST00000327554 ERC2-IT1O76042 136 aa8.64□□□□□ -1.03
CCDC60-201ENST00000327554 LINC01006Q8NI28 216 aa8.64□□□□□ -1.03
CCDC60-201ENST00000327554 UTP20O75691 2785 aaKnown RBP8.64□□□□□ -1.03
CCDC60-201ENST00000327554 BPY2O14599 106 aa8.64□□□□□ -1.03
CCDC60-201ENST00000327554 IGHV4-31P0DP07 118 aa8.64□□□□□ -1.03
CCDC60-201ENST00000327554 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
CCDC60-201ENST00000327554 USP9XQ93008 2570 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-201ENST00000327554 NCOR2Q9Y618 2525 aa8.63□□□□□ -1.03
CCDC60-201ENST00000327554 A0A096LPF7 62 aa8.63□□□□□ -1.03
CCDC60-201ENST00000327554 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms