RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
PRPF3-201ENST00000324862 Q8IZM0 81 aa10.02□□□□□ -0.81
PRPF3-201ENST00000324862 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
PRPF3-201ENST00000324862 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
PRPF3-201ENST00000324862 C9orf116Q5BN46 136 aaPredicted RBP10.02□□□□□ -0.81
PRPF3-201ENST00000324862 HECTD4Q9Y4D8 3996 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 ZNF561-AS1K7EIQ3 104 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
PRPF3-201ENST00000324862 MYMXA0A1B0GTQ4 84 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 RTL8CO15255 209 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 CFAP161Q6P656 301 aa10.01□□□□□ -0.81
PRPF3-201ENST00000324862 NTN5Q8WTR8 489 aaPredicted RBP10□□□□□ -0.81
PRPF3-201ENST00000324862 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
PRPF3-201ENST00000324862 CKS1BP61024 79 aa9.99□□□□□ -0.81
PRPF3-201ENST00000324862 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
PRPF3-201ENST00000324862 NDUFA1O15239 70 aa9.98□□□□□ -0.81
PRPF3-201ENST00000324862 TNP2Q05952 138 aa9.98□□□□□ -0.81
PRPF3-201ENST00000324862 Q6ZRU5 148 aa9.98□□□□□ -0.81
PRPF3-201ENST00000324862 A0A0J9YXY3 114 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 C2orf91Q6ZV80 131 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 DAND5Q8N907 189 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 A0A087WTM6 91 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 PCP4L1A6NKN8 68 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
PRPF3-201ENST00000324862 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.81
PRPF3-201ENST00000324862 PFN2P35080 140 aa9.96□□□□□ -0.82
PRPF3-201ENST00000324862 UQCR10Q9UDW1 63 aa9.96□□□□□ -0.82
PRPF3-201ENST00000324862 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
PRPF3-201ENST00000324862 ADAMTSL4-AS1Q5T5F5 129 aa9.95□□□□□ -0.82
PRPF3-201ENST00000324862 PKD1P98161 4303 aa9.95□□□□□ -0.82
PRPF3-201ENST00000324862 TSTD3H0UI37 97 aa9.95□□□□□ -0.82
PRPF3-201ENST00000324862 MIEN1Q9BRT3 115 aa9.95□□□□□ -0.82
PRPF3-201ENST00000324862 DNAH5Q8TE73 4624 aa9.95□□□□□ -0.82
PRPF3-201ENST00000324862 SMIM13P0DJ93 91 aa9.94□□□□□ -0.82
PRPF3-201ENST00000324862 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
PRPF3-201ENST00000324862 DLEU1O43261 78 aa9.93□□□□□ -0.82
PRPF3-201ENST00000324862 NPC2P61916 151 aa9.93□□□□□ -0.82
PRPF3-201ENST00000324862 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
PRPF3-201ENST00000324862 Q8N814 137 aa9.93□□□□□ -0.82
PRPF3-201ENST00000324862 LITAFQ99732 161 aa9.93□□□□□ -0.82
PRPF3-201ENST00000324862 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-201ENST00000324862 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
PRPF3-201ENST00000324862 CXCL5P42830 114 aa9.92□□□□□ -0.82
PRPF3-201ENST00000324862 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
PRPF3-201ENST00000324862 PKHD1P08F94 4074 aa9.91□□□□□ -0.82
PRPF3-201ENST00000324862 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
PRPF3-201ENST00000324862 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
PRPF3-201ENST00000324862 LINC00158P58513 81 aa9.9□□□□□ -0.82
PRPF3-201ENST00000324862 HERV-K104P63124 156 aa9.9□□□□□ -0.82
PRPF3-201ENST00000324862 DDTP30046 118 aa9.89□□□□□ -0.83
PRPF3-201ENST00000324862 CTAG1AP78358 180 aa9.89□□□□□ -0.83
PRPF3-201ENST00000324862 MIR7-3HGQ8N6C7 128 aa9.88□□□□□ -0.83
PRPF3-201ENST00000324862 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
PRPF3-201ENST00000324862 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
PRPF3-201ENST00000324862 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
PRPF3-201ENST00000324862 Q6ZRP5 223 aa9.87□□□□□ -0.83
PRPF3-201ENST00000324862 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
PRPF3-201ENST00000324862 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
PRPF3-201ENST00000324862 SOSTDC1Q6X4U4 206 aa9.86□□□□□ -0.83
PRPF3-201ENST00000324862 XAGE1AQ9HD64 81 aa9.86□□□□□ -0.83
PRPF3-201ENST00000324862 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
PRPF3-201ENST00000324862 SRSF9Q13242 221 aaKnown RBP eCLIP9.86□□□□□ -0.83
PRPF3-201ENST00000324862 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
PRPF3-201ENST00000324862 SFTA2Q6UW10 78 aa9.85□□□□□ -0.83
PRPF3-201ENST00000324862 HIGD1BQ9P298 99 aa9.85□□□□□ -0.83
PRPF3-201ENST00000324862 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
PRPF3-201ENST00000324862 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
PRPF3-201ENST00000324862 CIRBPQ14011 172 aaKnown RBP9.84□□□□□ -0.83
PRPF3-201ENST00000324862 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
PRPF3-201ENST00000324862 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
PRPF3-201ENST00000324862 TIMM17BO60830 172 aa9.83□□□□□ -0.84
PRPF3-201ENST00000324862 Q8NDZ9 215 aa9.83□□□□□ -0.84
PRPF3-201ENST00000324862 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
PRPF3-201ENST00000324862 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 GCSHP23434 173 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
PRPF3-201ENST00000324862 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
PRPF3-201ENST00000324862 LINC00587B1AMM8 73 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 LINC00308Q8TCZ7 52 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 SPANXDQ9BXN6 97 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
PRPF3-201ENST00000324862 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
PRPF3-201ENST00000324862 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
PRPF3-201ENST00000324862 F8WDY8 70 aa9.81□□□□□ -0.84
PRPF3-201ENST00000324862 FXYD2P54710 66 aa9.81□□□□□ -0.84
PRPF3-201ENST00000324862 COX17Q14061 63 aa9.81□□□□□ -0.84
PRPF3-201ENST00000324862 A0A096LNI7 61 aa9.8□□□□□ -0.84
PRPF3-201ENST00000324862 PANO1I0J062 215 aa9.8□□□□□ -0.84
PRPF3-201ENST00000324862 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
PRPF3-201ENST00000324862 PRR3P79522 188 aaKnown RBP9.8□□□□□ -0.84
PRPF3-201ENST00000324862 EREGO14944 169 aa9.79□□□□□ -0.84
PRPF3-201ENST00000324862 HSD52Q0P140 79 aa9.79□□□□□ -0.84
PRPF3-201ENST00000324862 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
PRPF3-201ENST00000324862 CEND1Q8N111 149 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms