RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 SCGB3A1Q96QR1 104 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 PRO0461Q9UI25 63 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 LPAP08519 4548 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 C11orf86A6NJI1 115 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 B5MCH6 92 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 IGKCP01834 107 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 RPL36AP83881 106 aaKnown RBP4.39□□□□□ -1.71
CSTF3-201ENST00000323959 Q6ZTI0 123 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 RPL36ALQ969Q0 106 aaKnown RBP4.39□□□□□ -1.71
CSTF3-201ENST00000323959 CHAC1Q9BUX1 264 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 IGLV5-45A0A087WSX0 123 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 TRGV1A0A0A0MS02 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 F5H697 171 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 H3BMG7 143 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 FXYD2P54710 66 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 LINC01547P58512 204 aaPredicted RBP4.38□□□□□ -1.71
CSTF3-201ENST00000323959 PPDPFQ9H3Y8 114 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 UBE2D4Q9Y2X8 147 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 IGLV4-69A0A075B6H9 119 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE12JA6NER3 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 TMEM262E9PQX1 116 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE7O76087 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 MT-ATP8P03928 68 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE12FP0CL80 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE12GP0CL81 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE12IP0CL82 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE4Q13068 117 aa4.38□□□□□ -1.71
CSTF3-201ENST00000323959 NOP10Q9NPE3 64 aaKnown RBP4.38□□□□□ -1.71
CSTF3-201ENST00000323959 NMUP48645 174 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 FAM74A4Q5TZK3 123 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 CEND1Q8N111 149 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 LINC01561Q8N1V8 128 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 SMIM20Q8N5G0 67 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 SLC25A29Q8N8R3 303 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 PRADC1Q9BSG0 188 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 NHP2Q9NX24 153 aaKnown RBP4.37□□□□□ -1.71
CSTF3-201ENST00000323959 IGLV4-3A0A075B6K6 122 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 DAD1P61803 113 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 FAM222AQ5U5X8 452 aa4.37□□□□□ -1.71
CSTF3-201ENST00000323959 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 Q8N814 137 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 PPDPFLQ8WWR9 84 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 PRO0255Q9UI72 69 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 A0A0J9YXV3 536 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 A0A1B0GUV1 79 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 C4orf48Q5BLP8 95 aa4.36□□□□□ -1.71
CSTF3-201ENST00000323959 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
CSTF3-201ENST00000323959 MUC17Q685J3 4493 aa4.35□□□□□ -1.71
CSTF3-201ENST00000323959 K7ERJ3 54 aa4.35□□□□□ -1.71
CSTF3-201ENST00000323959 PRSS1P07477 247 aa4.35□□□□□ -1.71
CSTF3-201ENST00000323959 TRBV25-1A0A075B6N4 114 aa4.35□□□□□ -1.71
CSTF3-201ENST00000323959 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 LRCOL1A6NCL2 159 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 PRM2P04554 102 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE2EQ4V326 116 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 LYRM7Q5U5X0 104 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 Q6Q795 121 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 NTM-AS1Q6ZSK4 140 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 GAGE2DQ9UEU5 116 aa4.34□□□□□ -1.71
CSTF3-201ENST00000323959 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.72
CSTF3-201ENST00000323959 TMEM223A0PJW6 202 aa4.34□□□□□ -1.72
CSTF3-201ENST00000323959 ATP5G1P05496 136 aa4.34□□□□□ -1.72
CSTF3-201ENST00000323959 UBE2D1P51668 147 aa4.34□□□□□ -1.72
CSTF3-201ENST00000323959 NDUFV3P56181 108 aaKnown RBP4.34□□□□□ -1.72
CSTF3-201ENST00000323959 TEN1Q86WV5 123 aa4.34□□□□□ -1.72
CSTF3-201ENST00000323959 TMEM126AQ9H061 195 aa4.34□□□□□ -1.72
CSTF3-201ENST00000323959 TRGV4A0A0C4DH28 118 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 HTN1P15515 57 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 HERVK_113P61574 105 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 RPL39P62891 51 aaKnown RBP4.33□□□□□ -1.72
CSTF3-201ENST00000323959 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 TMEM243Q9BU79 118 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 IGHV3OR16-12A0A075B7B8 117 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 LEPROTO15243 131 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 IFITM1P13164 125 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 CDC42SE2Q9NRR3 84 aa4.33□□□□□ -1.72
CSTF3-201ENST00000323959 SMCPP49901 116 aaPredicted RBP4.32□□□□□ -1.72
CSTF3-201ENST00000323959 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 TIMM17BO60830 172 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 HERVK_113P63121 156 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 PLEKHB2Q96CS7 222 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 VSIG2Q96IQ7 327 aa4.32□□□□□ -1.72
CSTF3-201ENST00000323959 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 SNCGO76070 127 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 ZNF22P17026 224 aaPredicted RBP4.31□□□□□ -1.72
CSTF3-201ENST00000323959 SFTA2Q6UW10 78 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 CARD19Q96LW7 228 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 Q9UF83 564 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms