RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 DEFB121Q5J5C9 76 aa5.17□□□□□ -1.58
SMC1A-201ENST00000322213 NTM-AS1Q6ZSK4 140 aa5.17□□□□□ -1.58
SMC1A-201ENST00000322213 IGKV2D-24A0A075B6R9 120 aa5.17□□□□□ -1.58
SMC1A-201ENST00000322213 C6orf99Q4VX62 202 aa5.17□□□□□ -1.58
SMC1A-201ENST00000322213 TMEM254Q8TBM7 123 aa5.17□□□□□ -1.58
SMC1A-201ENST00000322213 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
SMC1A-201ENST00000322213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
SMC1A-201ENST00000322213 K7ENP7 123 aa5.17□□□□□ -1.58
SMC1A-201ENST00000322213 EDN2P20800 178 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 LINC00269Q8N2A0 174 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 TRBV6-8A0A0A6YYG3 113 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 BCE1O60756 84 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 ZFP36P26651 326 aaKnown RBP5.16□□□□□ -1.58
SMC1A-201ENST00000322213 FAM30AQ9NZY2 134 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 CELSR3Q9NYQ7 3312 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 IGHV4-59P01825 116 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 LINC01547P58512 204 aaPredicted RBP5.16□□□□□ -1.58
SMC1A-201ENST00000322213 REG3AQ06141 175 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 IGHV4-38-2P0DP08 117 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 DHRS4-AS1Q9P1J3 65 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 DMXL1Q9Y485 3027 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
SMC1A-201ENST00000322213 Q8IZM0 81 aa5.15□□□□□ -1.58
SMC1A-201ENST00000322213 LIMD2Q9BT23 127 aa5.15□□□□□ -1.58
SMC1A-201ENST00000322213 K7EQG2 157 aa5.15□□□□□ -1.58
SMC1A-201ENST00000322213 DCANP1Q8TF63 244 aa5.15□□□□□ -1.58
SMC1A-201ENST00000322213 CHCHD10Q8WYQ3 142 aaPredicted RBP5.15□□□□□ -1.59
SMC1A-201ENST00000322213 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
SMC1A-201ENST00000322213 C1orf158Q8N1D5 194 aa5.14□□□□□ -1.59
SMC1A-201ENST00000322213 TEP1Q99973 2627 aaKnown RBP5.14□□□□□ -1.59
SMC1A-201ENST00000322213 NSD1Q96L73 2696 aaPredicted RBP5.14□□□□□ -1.59
SMC1A-201ENST00000322213 ASH1LQ9NR48 2969 aaKnown RBP5.14□□□□□ -1.59
SMC1A-201ENST00000322213 Q6ZQY7 126 aa5.14□□□□□ -1.59
SMC1A-201ENST00000322213 Q6ZSV7 163 aa5.14□□□□□ -1.59
SMC1A-201ENST00000322213 CD164L2Q6UWJ8 174 aa5.14□□□□□ -1.59
SMC1A-201ENST00000322213 TNRC18O15417 2968 aaPredicted RBP5.14□□□□□ -1.59
SMC1A-201ENST00000322213 FAM19A1Q7Z5A9 133 aa5.14□□□□□ -1.59
SMC1A-201ENST00000322213 ZNF73O43830 326 aaPredicted RBP5.14□□□□□ -1.59
SMC1A-201ENST00000322213 PLA2G2CQ5R387 149 aa5.14□□□□□ -1.59
SMC1A-201ENST00000322213 CDH23Q9H251 3354 aa5.13□□□□□ -1.59
SMC1A-201ENST00000322213 CCL18P55774 89 aa5.13□□□□□ -1.59
SMC1A-201ENST00000322213 A0A087WZ39 114 aa5.13□□□□□ -1.59
SMC1A-201ENST00000322213 NF1P21359 2839 aa5.13□□□□□ -1.59
SMC1A-201ENST00000322213 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
SMC1A-201ENST00000322213 SPART-AS1P0CW21 52 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 MRGPRG-AS1Q2M3A8 158 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 CDC42SE2Q9NRR3 84 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 PRO0255Q9UI72 69 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 COX6A2Q02221 97 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 FHL2Q14192 279 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 Q6ZTI0 123 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 PRR15Q8IV56 129 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 WFDC10AQ9H1F0 79 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 FLNCQ14315 2725 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 IL17DQ8TAD2 202 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 HILS1P60008 231 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 Q8N6K4 173 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 PROK1P58294 105 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 DEFB112Q30KQ8 113 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 LRCOL1A6NCL2 159 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 KLK12Q9UKR0 248 aa5.12□□□□□ -1.59
SMC1A-201ENST00000322213 CHCHD7Q9BUK0 85 aa5.11□□□□□ -1.59
SMC1A-201ENST00000322213 RNF223E7ERA6 249 aa5.11□□□□□ -1.59
SMC1A-201ENST00000322213 ZNF843Q8N446 348 aa5.11□□□□□ -1.59
SMC1A-201ENST00000322213 LINC00337Q8N6G1 96 aa5.11□□□□□ -1.59
SMC1A-201ENST00000322213 LINC01548A6NM66 108 aa5.11□□□□□ -1.59
SMC1A-201ENST00000322213 K7ERS5 55 aa5.1□□□□□ -1.59
SMC1A-201ENST00000322213 SERTAD4-AS1Q5TG53 156 aa5.1□□□□□ -1.59
SMC1A-201ENST00000322213 GRNP28799 593 aaKnown RBP5.1□□□□□ -1.59
SMC1A-201ENST00000322213 KLKP1Q107X0 134 aa5.1□□□□□ -1.59
SMC1A-201ENST00000322213 B9D2Q9BPU9 175 aa5.1□□□□□ -1.59
SMC1A-201ENST00000322213 SPTBN5Q9NRC6 3674 aaKnown RBP5.1□□□□□ -1.59
SMC1A-201ENST00000322213 SMCR5Q8TEV8 140 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 ZNF580Q9UK33 172 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 M0R378 163 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.59
SMC1A-201ENST00000322213 STAB1Q9NY15 2570 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 FBXL19-AS1Q494R0 122 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 CELA1Q9UNI1 258 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 WISP2O76076 250 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 PRR4Q16378 134 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 LINC01561Q8N1V8 128 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 A6NDX4 124 aa5.09□□□□□ -1.59
SMC1A-201ENST00000322213 Q6ZVQ6 151 aa5.09□□□□□ -1.6
SMC1A-201ENST00000322213 IGLV5-39A0A0G2JS06 123 aa5.08□□□□□ -1.6
SMC1A-201ENST00000322213 F8W735 103 aaPredicted RBP5.08□□□□□ -1.6
SMC1A-201ENST00000322213 ERC2-IT1O76042 136 aa5.08□□□□□ -1.6
SMC1A-201ENST00000322213 LOC110117498A0A087WWA1 95 aa5.08□□□□□ -1.6
SMC1A-201ENST00000322213 HIVEP1P15822 2718 aa5.08□□□□□ -1.6
SMC1A-201ENST00000322213 C9orf66Q5T8R8 295 aa5.08□□□□□ -1.6
SMC1A-201ENST00000322213 CRYBG3Q68DQ2 2970 aa5.08□□□□□ -1.6
SMC1A-201ENST00000322213 hDV103S1A0JD37 113 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 IGHV4-61A0A0C4DH41 118 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 LINC00959A0A1B0GUT2 108 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 IGLV5-45A0A087WSX0 123 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 ITPR2Q14571 2701 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 LINC00575Q6W349 94 aa5.07□□□□□ -1.6
SMC1A-201ENST00000322213 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms