RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 BOD1L2Q8IYS8 172 aa18.03■□□□□ 0.48
CTDNEP1-201ENST00000318988 LRCOL1A6NCL2 159 aa18.03■□□□□ 0.48
CTDNEP1-201ENST00000318988 TSTD3H0UI37 97 aa18.03■□□□□ 0.48
CTDNEP1-201ENST00000318988 WFDC2Q14508 124 aa18.03■□□□□ 0.48
CTDNEP1-201ENST00000318988 ZNF625Q96I27 306 aaPredicted RBP18.03■□□□□ 0.48
CTDNEP1-201ENST00000318988 DLEU1O43261 78 aa18.02■□□□□ 0.47
CTDNEP1-201ENST00000318988 SCGB1D4Q6XE38 83 aa18.02■□□□□ 0.47
CTDNEP1-201ENST00000318988 UQCR10Q9UDW1 63 aa18.02■□□□□ 0.47
CTDNEP1-201ENST00000318988 UNQ6190/PRO20217Q6UXQ8 127 aa17.99■□□□□ 0.47
CTDNEP1-201ENST00000318988 A0A087WTM6 91 aa17.98■□□□□ 0.47
CTDNEP1-201ENST00000318988 EREGO14944 169 aa17.98■□□□□ 0.47
CTDNEP1-201ENST00000318988 SYCNQ0VAF6 134 aa17.98■□□□□ 0.47
CTDNEP1-201ENST00000318988 MEIG1Q5JSS6 88 aa17.97■□□□□ 0.47
CTDNEP1-201ENST00000318988 A0A0J9YXY3 114 aa17.96■□□□□ 0.47
CTDNEP1-201ENST00000318988 RTL8CO15255 209 aa17.96■□□□□ 0.47
CTDNEP1-201ENST00000318988 TP73-AS1Q9UF72 201 aa17.96■□□□□ 0.47
CTDNEP1-201ENST00000318988 DNAH10Q8IVF4 4471 aa17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 LINC00587B1AMM8 73 aa17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 CIRBPQ14011 172 aaKnown RBP17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 C10orf25Q5T742 122 aa17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 CARD19Q96LW7 228 aa17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 MIEN1Q9BRT3 115 aa17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 SACSQ9NZJ4 4579 aa17.95■□□□□ 0.46
CTDNEP1-201ENST00000318988 Q6ZRU5 148 aa17.94■□□□□ 0.46
CTDNEP1-201ENST00000318988 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.93■□□□□ 0.46
CTDNEP1-201ENST00000318988 TRBV30A0A0K0K1B3 111 aa17.93■□□□□ 0.46
CTDNEP1-201ENST00000318988 Q8N814 137 aa17.93■□□□□ 0.46
CTDNEP1-201ENST00000318988 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.93■□□□□ 0.46
CTDNEP1-201ENST00000318988 TNP2Q05952 138 aa17.92■□□□□ 0.46
CTDNEP1-201ENST00000318988 C6orf48Q9UBA6 75 aa17.91■□□□□ 0.46
CTDNEP1-201ENST00000318988 ERG28Q9UKR5 140 aa17.91■□□□□ 0.46
CTDNEP1-201ENST00000318988 SLPIP03973 132 aa17.89■□□□□ 0.45
CTDNEP1-201ENST00000318988 PFN2P35080 140 aa17.89■□□□□ 0.45
CTDNEP1-201ENST00000318988 HNRNPA3P51991 378 aaKnown RBP17.89■□□□□ 0.45
CTDNEP1-201ENST00000318988 LINC00158P58513 81 aa17.89■□□□□ 0.45
CTDNEP1-201ENST00000318988 CNBPP62633 177 aaKnown RBP17.89■□□□□ 0.45
CTDNEP1-201ENST00000318988 HYDINQ4G0P3 5121 aa17.89■□□□□ 0.45
CTDNEP1-201ENST00000318988 TMEM238C9JI98 176 aa17.88■□□□□ 0.45
CTDNEP1-201ENST00000318988 DNAH2Q9P225 4427 aa17.88■□□□□ 0.45
CTDNEP1-201ENST00000318988 A0A0U1RRA0 63 aa17.88■□□□□ 0.45
CTDNEP1-201ENST00000318988 TIMM17BO60830 172 aa17.88■□□□□ 0.45
CTDNEP1-201ENST00000318988 SMIM13P0DJ93 91 aa17.88■□□□□ 0.45
CTDNEP1-201ENST00000318988 C9orf116Q5BN46 136 aaPredicted RBP17.88■□□□□ 0.45
CTDNEP1-201ENST00000318988 COX17Q14061 63 aa17.87■□□□□ 0.45
CTDNEP1-201ENST00000318988 RNF151Q2KHN1 245 aa17.87■□□□□ 0.45
CTDNEP1-201ENST00000318988 HIGD1BQ9P298 99 aa17.87■□□□□ 0.45
CTDNEP1-201ENST00000318988 C2orf91Q6ZV80 131 aa17.85■□□□□ 0.45
CTDNEP1-201ENST00000318988 SRSF9Q13242 221 aaKnown RBP eCLIP17.83■□□□□ 0.45
CTDNEP1-201ENST00000318988 LINC00336Q6ZUF6 198 aa17.83■□□□□ 0.45
CTDNEP1-201ENST00000318988 HIST1H4GQ99525 98 aa17.81■□□□□ 0.44
CTDNEP1-201ENST00000318988 LITAFQ99732 161 aa17.8■□□□□ 0.44
CTDNEP1-201ENST00000318988 SPANXB1Q9NS25 103 aaPredicted RBP17.8■□□□□ 0.44
CTDNEP1-201ENST00000318988 ADAMTSL4-AS1Q5T5F5 129 aa17.79■□□□□ 0.44
CTDNEP1-201ENST00000318988 MIR7-3HGQ8N6C7 128 aa17.79■□□□□ 0.44
CTDNEP1-201ENST00000318988 NDUFC2-KCTD14E9PQ53 114 aa17.78■□□□□ 0.44
CTDNEP1-201ENST00000318988 DDTP30046 118 aa17.78■□□□□ 0.44
CTDNEP1-201ENST00000318988 Q6ZVH6 145 aa17.78■□□□□ 0.44
CTDNEP1-201ENST00000318988 DAND5Q8N907 189 aa17.78■□□□□ 0.44
CTDNEP1-201ENST00000318988 SPANXDQ9BXN6 97 aa17.77■□□□□ 0.44
CTDNEP1-201ENST00000318988 SPANXCQ9NY87 97 aa17.77■□□□□ 0.44
CTDNEP1-201ENST00000318988 PKIGQ9Y2B9 76 aa17.77■□□□□ 0.44
CTDNEP1-201ENST00000318988 DNAH17Q9UFH2 4485 aa17.77■□□□□ 0.43
CTDNEP1-201ENST00000318988 LOC107984640A0A0U1RRK4 108 aa17.77■□□□□ 0.43
CTDNEP1-201ENST00000318988 IGLV5-52A0A0A0MRZ9 124 aa17.76■□□□□ 0.43
CTDNEP1-201ENST00000318988 PCP4L1A6NKN8 68 aa17.76■□□□□ 0.43
CTDNEP1-201ENST00000318988 RPL18AQ02543 176 aaKnown RBP17.76■□□□□ 0.43
CTDNEP1-201ENST00000318988 C9orf163Q8N9P6 203 aa17.76■□□□□ 0.43
CTDNEP1-201ENST00000318988 KMT2CQ8NEZ4 4911 aaKnown RBP17.75■□□□□ 0.43
CTDNEP1-201ENST00000318988 GCSHP23434 173 aa17.75■□□□□ 0.43
CTDNEP1-201ENST00000318988 COPS9Q8WXC6 57 aa17.75■□□□□ 0.43
CTDNEP1-201ENST00000318988 FRAS1Q86XX4 4008 aa17.75■□□□□ 0.43
CTDNEP1-201ENST00000318988 TLX1NBP0CAT3 122 aa17.74■□□□□ 0.43
CTDNEP1-201ENST00000318988 CTAG1AP78358 180 aa17.73■□□□□ 0.43
CTDNEP1-201ENST00000318988 TAL2Q16559 108 aa17.73■□□□□ 0.43
CTDNEP1-201ENST00000318988 NPC2P61916 151 aa17.72■□□□□ 0.43
CTDNEP1-201ENST00000318988 HSD52Q0P140 79 aa17.72■□□□□ 0.43
CTDNEP1-201ENST00000318988 GAGE2EQ4V326 116 aa17.72■□□□□ 0.43
CTDNEP1-201ENST00000318988 GAGE2DQ9UEU5 116 aa17.72■□□□□ 0.43
CTDNEP1-201ENST00000318988 RYR2Q92736 4967 aa17.72■□□□□ 0.43
CTDNEP1-201ENST00000318988 IFITM1P13164 125 aa17.72■□□□□ 0.43
CTDNEP1-201ENST00000318988 Q6ZRP5 223 aa17.71■□□□□ 0.43
CTDNEP1-201ENST00000318988 SND1-IT1Q9HBX3 110 aa17.71■□□□□ 0.43
CTDNEP1-201ENST00000318988 PGPEP1Q9NXJ5 209 aa17.71■□□□□ 0.43
CTDNEP1-201ENST00000318988 GAGE2BQ13066 116 aa17.7■□□□□ 0.42
CTDNEP1-201ENST00000318988 FUSP35637 526 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTDNEP1-201ENST00000318988 LINC00308Q8TCZ7 52 aa17.69■□□□□ 0.42
CTDNEP1-201ENST00000318988 MUSTN1Q8IVN3 82 aa17.68■□□□□ 0.42
CTDNEP1-201ENST00000318988 LINC01620Q4KN68 170 aa17.67■□□□□ 0.42
CTDNEP1-201ENST00000318988 CEND1Q8N111 149 aa17.67■□□□□ 0.42
CTDNEP1-201ENST00000318988 XAGE1AQ9HD64 81 aa17.67■□□□□ 0.42
CTDNEP1-201ENST00000318988 PTTG1IPP53801 180 aa17.66■□□□□ 0.42
CTDNEP1-201ENST00000318988 RPL24P83731 157 aaKnown RBP17.66■□□□□ 0.42
CTDNEP1-201ENST00000318988 KRTAP10-2P60368 255 aa17.65■□□□□ 0.42
CTDNEP1-201ENST00000318988 C16orf90A8MZG2 172 aa17.63■□□□□ 0.41
CTDNEP1-201ENST00000318988 M0R143 59 aa17.62■□□□□ 0.41
CTDNEP1-201ENST00000318988 SOSTDC1Q6X4U4 206 aa17.62■□□□□ 0.41
CTDNEP1-201ENST00000318988 SDIM1Q6ZPB5 146 aa17.62■□□□□ 0.41
CTDNEP1-201ENST00000318988 IGKV2-24A0A0C4DH68 120 aa17.62■□□□□ 0.41
CTDNEP1-201ENST00000318988 PPDPFQ9H3Y8 114 aa17.62■□□□□ 0.41
CTDNEP1-201ENST00000318988 A0A096LNI7 61 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms