RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
PDLIM5-202ENST00000318007 E9PLD3 99 aa10.1□□□□□ -0.79
PDLIM5-202ENST00000318007 TSTD3H0UI37 97 aa10.1□□□□□ -0.79
PDLIM5-202ENST00000318007 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
PDLIM5-202ENST00000318007 A0A087WTM6 91 aa10.1□□□□□ -0.79
PDLIM5-202ENST00000318007 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
PDLIM5-202ENST00000318007 J3QQQ9 107 aa10.1□□□□□ -0.79
PDLIM5-202ENST00000318007 LGALS3P17931 250 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-202ENST00000318007 CKS1BP61024 79 aa10.09□□□□□ -0.79
PDLIM5-202ENST00000318007 KIAA0087Q14695 138 aa10.09□□□□□ -0.79
PDLIM5-202ENST00000318007 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
PDLIM5-202ENST00000318007 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
PDLIM5-202ENST00000318007 LEPROTO15243 131 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 DDTP30046 118 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 CAMK2N2Q96S95 79 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 A0A0U1RRA0 63 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 SLPIP03973 132 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 C9orf116Q5BN46 136 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 UNQ6190/PRO20217Q6UXQ8 127 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 HECTD4Q9Y4D8 3996 aa10.08□□□□□ -0.8
PDLIM5-202ENST00000318007 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-202ENST00000318007 Q8IZM0 81 aa10.07□□□□□ -0.8
PDLIM5-202ENST00000318007 Q8N814 137 aa10.07□□□□□ -0.8
PDLIM5-202ENST00000318007 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
PDLIM5-202ENST00000318007 PKD1P98161 4303 aa10.06□□□□□ -0.8
PDLIM5-202ENST00000318007 Q6ZRU5 148 aa10.06□□□□□ -0.8
PDLIM5-202ENST00000318007 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 C21orf62-AS1Q17RA5 79 aa10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 LINC01561Q8N1V8 128 aa10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 NTN5Q8WTR8 489 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 DNAH11Q96DT5 4516 aa10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
PDLIM5-202ENST00000318007 NDUFA1O15239 70 aa10.03□□□□□ -0.8
PDLIM5-202ENST00000318007 PFN2P35080 140 aa10.03□□□□□ -0.8
PDLIM5-202ENST00000318007 PKHD1P08F94 4074 aa10.03□□□□□ -0.8
PDLIM5-202ENST00000318007 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
PDLIM5-202ENST00000318007 CARD19Q96LW7 228 aa10.03□□□□□ -0.8
PDLIM5-202ENST00000318007 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
PDLIM5-202ENST00000318007 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
PDLIM5-202ENST00000318007 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
PDLIM5-202ENST00000318007 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
PDLIM5-202ENST00000318007 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
PDLIM5-202ENST00000318007 DAND5Q8N907 189 aa10.01□□□□□ -0.81
PDLIM5-202ENST00000318007 EREGO14944 169 aa10.01□□□□□ -0.81
PDLIM5-202ENST00000318007 MYMXA0A1B0GTQ4 84 aa10□□□□□ -0.81
PDLIM5-202ENST00000318007 NPC2P61916 151 aa9.99□□□□□ -0.81
PDLIM5-202ENST00000318007 DNAH5Q8TE73 4624 aa9.99□□□□□ -0.81
PDLIM5-202ENST00000318007 IGLV5-52A0A0A0MRZ9 124 aa9.99□□□□□ -0.81
PDLIM5-202ENST00000318007 COX8AP10176 69 aa9.99□□□□□ -0.81
PDLIM5-202ENST00000318007 C2orf48Q96LS8 159 aa9.99□□□□□ -0.81
PDLIM5-202ENST00000318007 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-202ENST00000318007 A0A0J9YXY3 114 aa9.98□□□□□ -0.81
PDLIM5-202ENST00000318007 SMIM13P0DJ93 91 aa9.98□□□□□ -0.81
PDLIM5-202ENST00000318007 CXCL5P42830 114 aa9.98□□□□□ -0.81
PDLIM5-202ENST00000318007 RPL18AQ02543 176 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-202ENST00000318007 LINC00158P58513 81 aa9.97□□□□□ -0.81
PDLIM5-202ENST00000318007 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
PDLIM5-202ENST00000318007 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
PDLIM5-202ENST00000318007 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
PDLIM5-202ENST00000318007 ERG28Q9UKR5 140 aa9.97□□□□□ -0.81
PDLIM5-202ENST00000318007 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.81
PDLIM5-202ENST00000318007 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-202ENST00000318007 BOD1L2Q8IYS8 172 aa9.95□□□□□ -0.82
PDLIM5-202ENST00000318007 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
PDLIM5-202ENST00000318007 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 Q6ZRP5 223 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 LINC00336Q6ZUF6 198 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 HERV-K104P63124 156 aa9.94□□□□□ -0.82
PDLIM5-202ENST00000318007 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
PDLIM5-202ENST00000318007 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
PDLIM5-202ENST00000318007 C9orf163Q8N9P6 203 aa9.92□□□□□ -0.82
PDLIM5-202ENST00000318007 DLEU1O43261 78 aa9.91□□□□□ -0.82
PDLIM5-202ENST00000318007 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
PDLIM5-202ENST00000318007 C2orf91Q6ZV80 131 aa9.91□□□□□ -0.82
PDLIM5-202ENST00000318007 A0A096LNI7 61 aa9.9□□□□□ -0.82
PDLIM5-202ENST00000318007 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
PDLIM5-202ENST00000318007 LITAFQ99732 161 aa9.9□□□□□ -0.82
PDLIM5-202ENST00000318007 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
PDLIM5-202ENST00000318007 M0R143 59 aa9.9□□□□□ -0.83
PDLIM5-202ENST00000318007 EIF4EBP3O60516 100 aaPredicted RBP9.9□□□□□ -0.83
PDLIM5-202ENST00000318007 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.83
PDLIM5-202ENST00000318007 HAMPP81172 84 aa9.89□□□□□ -0.83
PDLIM5-202ENST00000318007 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDLIM5-202ENST00000318007 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 PANO1I0J062 215 aa9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 F8WDY8 70 aa9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 HNRNPA3P51991 378 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 DPH3Q96FX2 82 aa9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 SND1-IT1Q9HBX3 110 aa9.88□□□□□ -0.83
PDLIM5-202ENST00000318007 EPPK1P58107 5090 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-202ENST00000318007 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
PDLIM5-202ENST00000318007 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
PDLIM5-202ENST00000318007 HIST1H4GQ99525 98 aa9.87□□□□□ -0.83
PDLIM5-202ENST00000318007 FAM168BA1KXE4 195 aa9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 GCSHP23434 173 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms