RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
PCDHB9-201ENST00000316105 DMDP11532 3685 aa9.52□□□□□ -0.88
PCDHB9-201ENST00000316105 NTM-AS1Q6ZSK4 140 aa9.52□□□□□ -0.88
PCDHB9-201ENST00000316105 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
PCDHB9-201ENST00000316105 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
PCDHB9-201ENST00000316105 CD164L2Q6UWJ8 174 aa9.51□□□□□ -0.89
PCDHB9-201ENST00000316105 LINC00526Q96FQ7 95 aa9.51□□□□□ -0.89
PCDHB9-201ENST00000316105 TMEM258P61165 79 aa9.51□□□□□ -0.89
PCDHB9-201ENST00000316105 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
PCDHB9-201ENST00000316105 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
PCDHB9-201ENST00000316105 BRK1Q8WUW1 75 aa9.5□□□□□ -0.89
PCDHB9-201ENST00000316105 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
PCDHB9-201ENST00000316105 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
PCDHB9-201ENST00000316105 RMI2Q96E14 147 aa9.5□□□□□ -0.89
PCDHB9-201ENST00000316105 Q6Q795 121 aa9.49□□□□□ -0.89
PCDHB9-201ENST00000316105 PPDPFQ9H3Y8 114 aa9.49□□□□□ -0.89
PCDHB9-201ENST00000316105 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
PCDHB9-201ENST00000316105 CCL18P55774 89 aa9.49□□□□□ -0.89
PCDHB9-201ENST00000316105 HELZ2Q9BYK8 2649 aaKnown RBP9.49□□□□□ -0.89
PCDHB9-201ENST00000316105 SLPIP03973 132 aa9.49□□□□□ -0.89
PCDHB9-201ENST00000316105 A0A087WZ39 114 aa9.48□□□□□ -0.89
PCDHB9-201ENST00000316105 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
PCDHB9-201ENST00000316105 LELP1Q5T871 98 aa9.47□□□□□ -0.89
PCDHB9-201ENST00000316105 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
PCDHB9-201ENST00000316105 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
PCDHB9-201ENST00000316105 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
PCDHB9-201ENST00000316105 A8MTW9 85 aa9.47□□□□□ -0.89
PCDHB9-201ENST00000316105 NDUFC2O95298 119 aa9.46□□□□□ -0.9
PCDHB9-201ENST00000316105 Q8IZM0 81 aa9.46□□□□□ -0.9
PCDHB9-201ENST00000316105 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
PCDHB9-201ENST00000316105 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 IGLV5-39A0A0G2JS06 123 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 COX7CP15954 63 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 IMUPQ9GZP8 106 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 LOC107984640A0A0U1RRK4 108 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
PCDHB9-201ENST00000316105 JMJD7-PLA2G4BH0Y9G9 81 aa9.44□□□□□ -0.9
PCDHB9-201ENST00000316105 C6orf99Q4VX62 202 aa9.44□□□□□ -0.9
PCDHB9-201ENST00000316105 DEFB105AQ8NG35 78 aa9.44□□□□□ -0.9
PCDHB9-201ENST00000316105 TMEM256-PLSCR3K7ERE1 68 aa9.43□□□□□ -0.9
PCDHB9-201ENST00000316105 UBE2BP63146 152 aa9.43□□□□□ -0.9
PCDHB9-201ENST00000316105 RETNQ9HD89 108 aa9.43□□□□□ -0.9
PCDHB9-201ENST00000316105 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
PCDHB9-201ENST00000316105 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
PCDHB9-201ENST00000316105 TEX15Q9BXT5 2789 aa9.42□□□□□ -0.9
PCDHB9-201ENST00000316105 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
PCDHB9-201ENST00000316105 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
PCDHB9-201ENST00000316105 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
PCDHB9-201ENST00000316105 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
PCDHB9-201ENST00000316105 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
PCDHB9-201ENST00000316105 A0A1B0GUV1 79 aa9.41□□□□□ -0.9
PCDHB9-201ENST00000316105 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
PCDHB9-201ENST00000316105 H3BQ85 93 aa9.4□□□□□ -0.9
PCDHB9-201ENST00000316105 ASPMQ8IZT6 3477 aa9.4□□□□□ -0.9
PCDHB9-201ENST00000316105 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
PCDHB9-201ENST00000316105 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
PCDHB9-201ENST00000316105 SERP2Q8N6R1 65 aa9.4□□□□□ -0.91
PCDHB9-201ENST00000316105 CYSRT1A8MQ03 144 aa9.39□□□□□ -0.91
PCDHB9-201ENST00000316105 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
PCDHB9-201ENST00000316105 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
PCDHB9-201ENST00000316105 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 COX7BP24311 80 aa9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 CHD6Q8TD26 2715 aa9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 V9GYY9 64 aa9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 X6R8D5 127 aa9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 CELA1Q9UNI1 258 aa9.38□□□□□ -0.91
PCDHB9-201ENST00000316105 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
PCDHB9-201ENST00000316105 COX17Q14061 63 aa9.37□□□□□ -0.91
PCDHB9-201ENST00000316105 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
PCDHB9-201ENST00000316105 CR1P17927 2039 aa9.37□□□□□ -0.91
PCDHB9-201ENST00000316105 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
PCDHB9-201ENST00000316105 FAM240AA0A1B0GVK7 77 aa9.36□□□□□ -0.91
PCDHB9-201ENST00000316105 SOSTDC1Q6X4U4 206 aa9.36□□□□□ -0.91
PCDHB9-201ENST00000316105 Q6ZTC4 211 aa9.36□□□□□ -0.91
PCDHB9-201ENST00000316105 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
PCDHB9-201ENST00000316105 LITAFQ99732 161 aa9.35□□□□□ -0.91
PCDHB9-201ENST00000316105 LAMA5O15230 3695 aa9.35□□□□□ -0.91
PCDHB9-201ENST00000316105 HRNRQ86YZ3 2850 aaPredicted RBP9.35□□□□□ -0.91
PCDHB9-201ENST00000316105 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
PCDHB9-201ENST00000316105 A0A087WYN8 130 aa9.34□□□□□ -0.91
PCDHB9-201ENST00000316105 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
PCDHB9-201ENST00000316105 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.91
PCDHB9-201ENST00000316105 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
PCDHB9-201ENST00000316105 C6orf223Q8N319 242 aa9.33□□□□□ -0.92
PCDHB9-201ENST00000316105 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
PCDHB9-201ENST00000316105 ITPR1Q14643 2758 aa9.33□□□□□ -0.92
PCDHB9-201ENST00000316105 PDE6GP18545 87 aa9.33□□□□□ -0.92
PCDHB9-201ENST00000316105 UPK3BQ9BT76 320 aa9.32□□□□□ -0.92
PCDHB9-201ENST00000316105 Q6ZQY7 126 aa9.32□□□□□ -0.92
PCDHB9-201ENST00000316105 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
PCDHB9-201ENST00000316105 TRAV10A0A0B4J240 114 aa9.32□□□□□ -0.92
PCDHB9-201ENST00000316105 KRTAP1-1Q07627 177 aa9.31□□□□□ -0.92
PCDHB9-201ENST00000316105 ENHOQ6UWT2 76 aa9.31□□□□□ -0.92
PCDHB9-201ENST00000316105 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms