RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SPANXDQ9BXN6 97 aa5.32□□□□□ -1.56
TRIM55-202ENST00000315962 SPANXCQ9NY87 97 aa5.32□□□□□ -1.56
TRIM55-202ENST00000315962 IGLV4-60A0A075B6I1 120 aa5.32□□□□□ -1.56
TRIM55-202ENST00000315962 UBE2L6O14933 153 aa5.32□□□□□ -1.56
TRIM55-202ENST00000315962 KLK5Q9Y337 293 aaPredicted RBP5.32□□□□□ -1.56
TRIM55-202ENST00000315962 TENM2Q9NT68 2774 aa5.32□□□□□ -1.56
TRIM55-202ENST00000315962 F5H768 121 aa5.31□□□□□ -1.56
TRIM55-202ENST00000315962 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
TRIM55-202ENST00000315962 DAZ4Q86SG3 579 aaKnown RBP5.31□□□□□ -1.56
TRIM55-202ENST00000315962 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
TRIM55-202ENST00000315962 DNAJC30Q96LL9 226 aa5.31□□□□□ -1.56
TRIM55-202ENST00000315962 DAZ3Q9NR90 486 aaKnown RBP5.31□□□□□ -1.56
TRIM55-202ENST00000315962 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
TRIM55-202ENST00000315962 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
TRIM55-202ENST00000315962 OVOL2Q9BRP0 275 aa5.31□□□□□ -1.56
TRIM55-202ENST00000315962 ATP5G1P05496 136 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 GAGE2AQ6NT46 116 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 TMEM126AQ9H061 195 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 STAB2Q8WWQ8 2551 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 SMIM1B2RUZ4 78 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 H3BT86 120 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 DAD1P61803 113 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 PAX4O43316 350 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 PFN2P35080 140 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 APOC4P55056 127 aa5.3□□□□□ -1.56
TRIM55-202ENST00000315962 IGLV10-54A0A075B6I4 117 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 TRBV6-4A0A1B0GX49 114 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 NDUFA1O15239 70 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 SLPIP03973 132 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 BAALC-AS2P0C853 105 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 CIRBPQ14011 172 aaKnown RBP5.29□□□□□ -1.56
TRIM55-202ENST00000315962 DEFB121Q5J5C9 76 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 TMEM243Q9BU79 118 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 COL7A1Q02388 2944 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 TRBV10-1A0A0K0K1A3 114 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 EDA2RQ9HAV5 297 aa5.29□□□□□ -1.56
TRIM55-202ENST00000315962 TRBV6-8A0A0A6YYG3 113 aa5.28□□□□□ -1.56
TRIM55-202ENST00000315962 MRPL23Q16540 153 aaKnown RBP5.28□□□□□ -1.56
TRIM55-202ENST00000315962 Q8NAQ8 132 aa5.28□□□□□ -1.56
TRIM55-202ENST00000315962 IGKV3D-7A0A0C4DH55 119 aa5.28□□□□□ -1.56
TRIM55-202ENST00000315962 COX7A2LO14548 114 aa5.28□□□□□ -1.56
TRIM55-202ENST00000315962 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
TRIM55-202ENST00000315962 CDC42SE2Q9NRR3 84 aa5.28□□□□□ -1.56
TRIM55-202ENST00000315962 A0A087WYN8 130 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 TIRAPP58753 221 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 C5orf38Q86SI9 138 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 C14orf132Q9NPU4 83 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 XCL1P47992 114 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 LINC00337Q8N6G1 96 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 PRO0255Q9UI72 69 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 CSMD3Q7Z407 3707 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 A0A087WVE0 104 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 LINC00158P58513 81 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
TRIM55-202ENST00000315962 HERVK_113P63121 156 aa5.26□□□□□ -1.57
TRIM55-202ENST00000315962 OR13C6PQ8NH95 151 aa5.26□□□□□ -1.57
TRIM55-202ENST00000315962 KIR2DL5BQ8NHK3 375 aa5.26□□□□□ -1.57
TRIM55-202ENST00000315962 MDFIQ99750 246 aa5.26□□□□□ -1.57
TRIM55-202ENST00000315962 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
TRIM55-202ENST00000315962 SPART-AS1P0CW21 52 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 Q6ZTC4 211 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 IGLV5-39A0A0G2JS06 123 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 NCR3O14931 201 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 PRR3P79522 188 aaKnown RBP5.25□□□□□ -1.57
TRIM55-202ENST00000315962 LINC00269Q8N2A0 174 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
TRIM55-202ENST00000315962 A0A0J9YWU9 116 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 CRPP02741 224 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 NANOS2P60321 138 aaKnown RBP5.24□□□□□ -1.57
TRIM55-202ENST00000315962 Q6Q795 121 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 LINC00526Q96FQ7 95 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 SND1-IT1Q9HBX3 110 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 IGKV2-28A0A075B6P5 120 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 IGLV5-45A0A087WSX0 123 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 LECT2O14960 151 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 IGKV2D-28P01615 120 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 ANGP03950 147 aaKnown RBP5.24□□□□□ -1.57
TRIM55-202ENST00000315962 FAM19A5Q7Z5A7 132 aaPredicted RBP5.24□□□□□ -1.57
TRIM55-202ENST00000315962 SMIM11BQ8TCY0 68 aa5.24□□□□□ -1.57
TRIM55-202ENST00000315962 LYRM9A8MSI8 78 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 MIFP14174 115 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 LINC00612Q8N6U2 182 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 TRBV7-7A0A0K0K1E9 115 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 A0A1B0GX51 115 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 TIMM17BO60830 172 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 DNAL4O96015 105 aa5.23□□□□□ -1.57
TRIM55-202ENST00000315962 LYSTQ99698 3801 aa5.22□□□□□ -1.57
TRIM55-202ENST00000315962 FAM240AA0A1B0GVK7 77 aa5.22□□□□□ -1.57
TRIM55-202ENST00000315962 J3KT08 172 aa5.22□□□□□ -1.57
TRIM55-202ENST00000315962 MALP21145 153 aa5.22□□□□□ -1.57
TRIM55-202ENST00000315962 CCL18P55774 89 aa5.22□□□□□ -1.57
TRIM55-202ENST00000315962 COX7B2Q8TF08 81 aa5.22□□□□□ -1.57
TRIM55-202ENST00000315962 CMYA5Q8N3K9 4069 aa5.21□□□□□ -1.57
TRIM55-202ENST00000315962 hADV29S1A0JD25 119 aa5.21□□□□□ -1.57
TRIM55-202ENST00000315962 LINC00959A0A1B0GUT2 108 aa5.21□□□□□ -1.58
TRIM55-202ENST00000315962 LINC00846Q9NV44 126 aa5.21□□□□□ -1.58
TRIM55-202ENST00000315962 KLK12Q9UKR0 248 aa5.21□□□□□ -1.58
TRIM55-202ENST00000315962 LINC00643Q86TS7 51 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms