RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
RNF4-201ENST00000314289 PAX4O43316 350 aa8.66□□□□□ -1.02
RNF4-201ENST00000314289 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
RNF4-201ENST00000314289 DAD1P61803 113 aa8.65□□□□□ -1.02
RNF4-201ENST00000314289 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
RNF4-201ENST00000314289 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
RNF4-201ENST00000314289 KRTAP10-11P60412 298 aa8.65□□□□□ -1.02
RNF4-201ENST00000314289 LINC00612Q8N6U2 182 aa8.65□□□□□ -1.02
RNF4-201ENST00000314289 PRO0255Q9UI72 69 aa8.65□□□□□ -1.02
RNF4-201ENST00000314289 SMIM9A6NGZ8 99 aa8.65□□□□□ -1.03
RNF4-201ENST00000314289 F5H768 121 aa8.64□□□□□ -1.03
RNF4-201ENST00000314289 Q8NAQ8 132 aa8.64□□□□□ -1.03
RNF4-201ENST00000314289 C5orf38Q86SI9 138 aa8.64□□□□□ -1.03
RNF4-201ENST00000314289 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
RNF4-201ENST00000314289 HERV-K104P63124 156 aa8.63□□□□□ -1.03
RNF4-201ENST00000314289 CMYA5Q8N3K9 4069 aa8.63□□□□□ -1.03
RNF4-201ENST00000314289 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
RNF4-201ENST00000314289 PRIMA1Q86XR5 153 aa8.62□□□□□ -1.03
RNF4-201ENST00000314289 C11orf68Q9H3H3 251 aaKnown RBP8.62□□□□□ -1.03
RNF4-201ENST00000314289 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
RNF4-201ENST00000314289 FAM236AA0A1B0GUQ0 79 aa8.62□□□□□ -1.03
RNF4-201ENST00000314289 FAM236BA0A1B0GV22 79 aa8.62□□□□□ -1.03
RNF4-201ENST00000314289 LYRM9A8MSI8 78 aa8.62□□□□□ -1.03
RNF4-201ENST00000314289 XCL1P47992 114 aa8.61□□□□□ -1.03
RNF4-201ENST00000314289 CIRBPQ14011 172 aaKnown RBP8.61□□□□□ -1.03
RNF4-201ENST00000314289 PRB2P02812 416 aaPredicted RBP8.61□□□□□ -1.03
RNF4-201ENST00000314289 FAM240AA0A1B0GVK7 77 aa8.6□□□□□ -1.03
RNF4-201ENST00000314289 NDUFA1O15239 70 aa8.6□□□□□ -1.03
RNF4-201ENST00000314289 LINC00308Q8TCZ7 52 aa8.6□□□□□ -1.03
RNF4-201ENST00000314289 IGLV10-54A0A075B6I4 117 aa8.6□□□□□ -1.03
RNF4-201ENST00000314289 MRPL23Q16540 153 aaKnown RBP8.6□□□□□ -1.03
RNF4-201ENST00000314289 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
RNF4-201ENST00000314289 ATP5G1P05496 136 aa8.59□□□□□ -1.03
RNF4-201ENST00000314289 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 MIFP14174 115 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 DEFB121Q5J5C9 76 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 TIMM17BO60830 172 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 SMCR5Q8TEV8 140 aa8.58□□□□□ -1.04
RNF4-201ENST00000314289 COX7A2LO14548 114 aa8.57□□□□□ -1.04
RNF4-201ENST00000314289 FAM19A3Q7Z5A8 133 aa8.57□□□□□ -1.04
RNF4-201ENST00000314289 LINC00269Q8N2A0 174 aa8.57□□□□□ -1.04
RNF4-201ENST00000314289 IGHV3OR16-9A0A0B4J2B5 98 aa8.57□□□□□ -1.04
RNF4-201ENST00000314289 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
RNF4-201ENST00000314289 WIPF1O43516 503 aa8.56□□□□□ -1.04
RNF4-201ENST00000314289 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
RNF4-201ENST00000314289 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
RNF4-201ENST00000314289 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
RNF4-201ENST00000314289 PFN2P35080 140 aa8.55□□□□□ -1.04
RNF4-201ENST00000314289 Q9HAA7 133 aa8.55□□□□□ -1.04
RNF4-201ENST00000314289 FAM218AQ96MZ4 157 aa8.54□□□□□ -1.04
RNF4-201ENST00000314289 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
RNF4-201ENST00000314289 ACYP1P07311 99 aa8.53□□□□□ -1.04
RNF4-201ENST00000314289 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.04
RNF4-201ENST00000314289 A0A087WZ39 114 aa8.52□□□□□ -1.05
RNF4-201ENST00000314289 LINC00158P58513 81 aa8.52□□□□□ -1.05
RNF4-201ENST00000314289 SS18Q15532 418 aa8.52□□□□□ -1.05
RNF4-201ENST00000314289 Q6ZTC4 211 aa8.52□□□□□ -1.05
RNF4-201ENST00000314289 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
RNF4-201ENST00000314289 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
RNF4-201ENST00000314289 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
RNF4-201ENST00000314289 LINC00643Q86TS7 51 aa8.51□□□□□ -1.05
RNF4-201ENST00000314289 REG3AQ06141 175 aa8.51□□□□□ -1.05
RNF4-201ENST00000314289 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
RNF4-201ENST00000314289 COPS9Q8WXC6 57 aa8.5□□□□□ -1.05
RNF4-201ENST00000314289 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
RNF4-201ENST00000314289 KLK12Q9UKR0 248 aa8.5□□□□□ -1.05
RNF4-201ENST00000314289 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
RNF4-201ENST00000314289 TRACP01848 142 aa8.49□□□□□ -1.05
RNF4-201ENST00000314289 MRAPQ8TCY5 172 aa8.49□□□□□ -1.05
RNF4-201ENST00000314289 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
RNF4-201ENST00000314289 NANOS2P60321 138 aaKnown RBP8.49□□□□□ -1.05
RNF4-201ENST00000314289 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
RNF4-201ENST00000314289 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
RNF4-201ENST00000314289 EGFEM1PQ0D2K5 195 aa8.48□□□□□ -1.05
RNF4-201ENST00000314289 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
RNF4-201ENST00000314289 C22orf24Q9Y442 160 aa8.48□□□□□ -1.05
RNF4-201ENST00000314289 CRPP02741 224 aa8.48□□□□□ -1.05
RNF4-201ENST00000314289 C3orf22Q8N5N4 141 aa8.48□□□□□ -1.05
RNF4-201ENST00000314289 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
RNF4-201ENST00000314289 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
RNF4-201ENST00000314289 MALP21145 153 aa8.46□□□□□ -1.05
RNF4-201ENST00000314289 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.05
RNF4-201ENST00000314289 DNAL4O96015 105 aa8.46□□□□□ -1.06
RNF4-201ENST00000314289 INAFM2P0DMQ5 153 aa8.46□□□□□ -1.06
RNF4-201ENST00000314289 WFDC10BQ8IUB3 73 aa8.46□□□□□ -1.06
RNF4-201ENST00000314289 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
RNF4-201ENST00000314289 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
RNF4-201ENST00000314289 LELP1Q5T871 98 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 C14orf132Q9NPU4 83 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 A0A087WYN8 130 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 UQCRQO14949 82 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 C6orf223Q8N319 242 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 DNAH3Q8TD57 4116 aa8.45□□□□□ -1.06
RNF4-201ENST00000314289 STAB2Q8WWQ8 2551 aa8.44□□□□□ -1.06
RNF4-201ENST00000314289 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
RNF4-201ENST00000314289 CCL18P55774 89 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms