RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 XCL1P47992 114 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 C3orf56Q8N813 242 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 EPG5Q9HCE0 2579 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 NCR3O14931 201 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 CCKP06307 115 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 GYPEP15421 78 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 ESM1Q9NQ30 184 aa9.62□□□□□ -0.87
MKS1-201ENST00000313863 UBR5O95071 2799 aaPredicted RBP9.62□□□□□ -0.87
MKS1-201ENST00000313863 AKAP9Q99996 3911 aa9.61□□□□□ -0.87
MKS1-201ENST00000313863 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
MKS1-201ENST00000313863 ATP5EP2Q5VTU8 51 aa9.61□□□□□ -0.87
MKS1-201ENST00000313863 LINC01006Q8NI28 216 aa9.61□□□□□ -0.87
MKS1-201ENST00000313863 C11orf68Q9H3H3 251 aaKnown RBP9.61□□□□□ -0.87
MKS1-201ENST00000313863 ZNF462Q96JM2 2506 aa9.61□□□□□ -0.87
MKS1-201ENST00000313863 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
MKS1-201ENST00000313863 TMEM256-PLSCR3K7ERE1 68 aa9.6□□□□□ -0.87
MKS1-201ENST00000313863 RNASE1P07998 156 aaKnown RBP9.6□□□□□ -0.87
MKS1-201ENST00000313863 DEFB130BP0DP73 79 aa9.6□□□□□ -0.87
MKS1-201ENST00000313863 DEFB130AP0DP74 79 aa9.6□□□□□ -0.87
MKS1-201ENST00000313863 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
MKS1-201ENST00000313863 IGKV3D-7A0A0C4DH55 119 aa9.6□□□□□ -0.87
MKS1-201ENST00000313863 SMIM9A6NGZ8 99 aa9.59□□□□□ -0.87
MKS1-201ENST00000313863 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
MKS1-201ENST00000313863 SLPIP03973 132 aa9.59□□□□□ -0.87
MKS1-201ENST00000313863 SERP2Q8N6R1 65 aa9.59□□□□□ -0.87
MKS1-201ENST00000313863 Q8N814 137 aa9.59□□□□□ -0.87
MKS1-201ENST00000313863 JMJD1CQ15652 2540 aa9.58□□□□□ -0.88
MKS1-201ENST00000313863 PRB1P04280 392 aa9.58□□□□□ -0.88
MKS1-201ENST00000313863 PLA2G2AP14555 144 aa9.58□□□□□ -0.88
MKS1-201ENST00000313863 C5orf47Q569G3 176 aa9.58□□□□□ -0.88
MKS1-201ENST00000313863 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
MKS1-201ENST00000313863 MUC7Q8TAX7 377 aa9.57□□□□□ -0.88
MKS1-201ENST00000313863 ZNF843Q8N446 348 aa9.56□□□□□ -0.88
MKS1-201ENST00000313863 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
MKS1-201ENST00000313863 IGHV4-28A0A0C4DH34 117 aa9.55□□□□□ -0.88
MKS1-201ENST00000313863 USP17L23D6RBM5 183 aa9.54□□□□□ -0.88
MKS1-201ENST00000313863 NANOS2P60321 138 aaKnown RBP9.54□□□□□ -0.88
MKS1-201ENST00000313863 TMEM258P61165 79 aa9.54□□□□□ -0.88
MKS1-201ENST00000313863 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
MKS1-201ENST00000313863 BBC3Q96PG8 261 aaPredicted RBP9.54□□□□□ -0.88
MKS1-201ENST00000313863 SONP18583 2426 aaKnown RBP9.54□□□□□ -0.88
MKS1-201ENST00000313863 LYRM9A8MSI8 78 aa9.54□□□□□ -0.88
MKS1-201ENST00000313863 hADV29S1A0JD25 119 aa9.53□□□□□ -0.88
MKS1-201ENST00000313863 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
MKS1-201ENST00000313863 ZFYVE26Q68DK2 2539 aa9.53□□□□□ -0.88
MKS1-201ENST00000313863 TRBV10-3A0A0K0K1G6 114 aa9.52□□□□□ -0.88
MKS1-201ENST00000313863 H3BQ85 93 aa9.52□□□□□ -0.88
MKS1-201ENST00000313863 CLPSL2Q6UWE3 100 aa9.52□□□□□ -0.88
MKS1-201ENST00000313863 FAM19A5Q7Z5A7 132 aaPredicted RBP9.52□□□□□ -0.88
MKS1-201ENST00000313863 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.88
MKS1-201ENST00000313863 USP24Q9UPU5 2620 aa9.52□□□□□ -0.88
MKS1-201ENST00000313863 LOC107984640A0A0U1RRK4 108 aa9.52□□□□□ -0.89
MKS1-201ENST00000313863 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
MKS1-201ENST00000313863 UBL5Q9BZL1 73 aa9.52□□□□□ -0.89
MKS1-201ENST00000313863 APCP25054 2843 aa9.51□□□□□ -0.89
MKS1-201ENST00000313863 WIPF1O43516 503 aa9.51□□□□□ -0.89
MKS1-201ENST00000313863 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
MKS1-201ENST00000313863 X6R8D5 127 aa9.51□□□□□ -0.89
MKS1-201ENST00000313863 NF1P21359 2839 aa9.5□□□□□ -0.89
MKS1-201ENST00000313863 A0A087WVE0 104 aa9.5□□□□□ -0.89
MKS1-201ENST00000313863 LYPD5Q6UWN5 251 aa9.5□□□□□ -0.89
MKS1-201ENST00000313863 ANGP03950 147 aaKnown RBP9.49□□□□□ -0.89
MKS1-201ENST00000313863 REG3AQ06141 175 aa9.49□□□□□ -0.89
MKS1-201ENST00000313863 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
MKS1-201ENST00000313863 C6orf99Q4VX62 202 aa9.49□□□□□ -0.89
MKS1-201ENST00000313863 LINC00575Q6W349 94 aa9.49□□□□□ -0.89
MKS1-201ENST00000313863 ZNF561-AS1K7EIQ3 104 aa9.48□□□□□ -0.89
MKS1-201ENST00000313863 FLNAP21333 2647 aaKnown RBP9.48□□□□□ -0.89
MKS1-201ENST00000313863 A0A096LPF7 62 aa9.47□□□□□ -0.89
MKS1-201ENST00000313863 SETD2Q9BYW2 2564 aaPredicted RBP9.47□□□□□ -0.89
MKS1-201ENST00000313863 HILS1P60008 231 aa9.47□□□□□ -0.89
MKS1-201ENST00000313863 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
MKS1-201ENST00000313863 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.89
MKS1-201ENST00000313863 PDE6GP18545 87 aa9.46□□□□□ -0.89
MKS1-201ENST00000313863 KRTAP1-1Q07627 177 aa9.46□□□□□ -0.89
MKS1-201ENST00000313863 BCE1O60756 84 aa9.46□□□□□ -0.9
MKS1-201ENST00000313863 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
MKS1-201ENST00000313863 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.9
MKS1-201ENST00000313863 ZNF469Q96JG9 3925 aaPredicted RBP9.46□□□□□ -0.9
MKS1-201ENST00000313863 LINC00482Q8N8I6 264 aa9.45□□□□□ -0.9
MKS1-201ENST00000313863 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 GHRHP01286 108 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 CCDC168Q8NDH2 2452 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 DAD1P61803 113 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
MKS1-201ENST00000313863 C6orf223Q8N319 242 aa9.44□□□□□ -0.9
MKS1-201ENST00000313863 A0A0J9YWU9 116 aa9.43□□□□□ -0.9
MKS1-201ENST00000313863 IGHV4-30-4P0DP06 118 aa9.43□□□□□ -0.9
MKS1-201ENST00000313863 Q6ZQT0 140 aa9.43□□□□□ -0.9
MKS1-201ENST00000313863 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
MKS1-201ENST00000313863 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
MKS1-201ENST00000313863 APOC4P55056 127 aa9.43□□□□□ -0.9
MKS1-201ENST00000313863 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
MKS1-201ENST00000313863 IGLV6-57P01721 117 aa9.42□□□□□ -0.9
MKS1-201ENST00000313863 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
MKS1-201ENST00000313863 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms