RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 HBBP68871 147 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 MRPS36P82909 103 aaKnown RBP5.01□□□□□ -1.61
TPM3-203ENST00000312970 RPL18AQ02543 176 aaKnown RBP5.01□□□□□ -1.61
TPM3-203ENST00000312970 SPAG11BQ08648 103 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 SLC7A5P1Q8MH63 180 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 FAM104AQ969W3 186 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 IMMP2LQ96T52 175 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 SMIM2Q9BVW6 85 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 SPANXA1Q9NS26 97 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 MRPL35Q9NZE8 188 aaKnown RBP5.01□□□□□ -1.61
TPM3-203ENST00000312970 PSORS1C2Q9UIG4 136 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 MUC2Q02817 5179 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
TPM3-203ENST00000312970 IGHV3OR16-9A0A0B4J2B5 98 aa5□□□□□ -1.61
TPM3-203ENST00000312970 PPBPP02775 128 aa5□□□□□ -1.61
TPM3-203ENST00000312970 PHF5AQ7RTV0 110 aaKnown RBP5□□□□□ -1.61
TPM3-203ENST00000312970 ORAOV1Q8WV07 137 aa5□□□□□ -1.61
TPM3-203ENST00000312970 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
TPM3-203ENST00000312970 NDUFA1O15239 70 aa4.99□□□□□ -1.61
TPM3-203ENST00000312970 NPYP01303 97 aa4.99□□□□□ -1.61
TPM3-203ENST00000312970 RAB5AP20339 215 aa4.99□□□□□ -1.61
TPM3-203ENST00000312970 C1orf137Q5JT78 98 aa4.99□□□□□ -1.61
TPM3-203ENST00000312970 MRPL54Q6P161 138 aaKnown RBP4.99□□□□□ -1.61
TPM3-203ENST00000312970 TGIF2-C20orf24A0A0A6YYL0 155 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 IFITM10A6NMD0 228 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 TSPAN13O95857 204 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 IFI27P40305 119 aaPredicted RBP4.98□□□□□ -1.61
TPM3-203ENST00000312970 UNQ6190/PRO20217Q6UXQ8 127 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 TMEM136Q6ZRR5 245 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 ORMDL3Q8N138 153 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 PYGO1Q9Y3Y4 419 aa4.98□□□□□ -1.61
TPM3-203ENST00000312970 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
TPM3-203ENST00000312970 IGLV7-43P04211 117 aa4.97□□□□□ -1.61
TPM3-203ENST00000312970 ATP5L2Q7Z4Y8 100 aa4.97□□□□□ -1.61
TPM3-203ENST00000312970 DIRC1Q969H9 104 aa4.97□□□□□ -1.61
TPM3-203ENST00000312970 PRELID3AQ96N28 172 aa4.97□□□□□ -1.61
TPM3-203ENST00000312970 FAM168BA1KXE4 195 aa4.96□□□□□ -1.62
TPM3-203ENST00000312970 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
TPM3-203ENST00000312970 LINC00242Q5T6M2 205 aa4.96□□□□□ -1.62
TPM3-203ENST00000312970 TMEM141Q96I45 108 aa4.96□□□□□ -1.62
TPM3-203ENST00000312970 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.62
TPM3-203ENST00000312970 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
TPM3-203ENST00000312970 IGLV4-3A0A075B6K6 122 aa4.95□□□□□ -1.62
TPM3-203ENST00000312970 TRBV30A0A0K0K1B3 111 aa4.95□□□□□ -1.62
TPM3-203ENST00000312970 LOC389332A0A1B0GUA5 103 aa4.95□□□□□ -1.62
TPM3-203ENST00000312970 TEX43Q6ZNM6 134 aa4.95□□□□□ -1.62
TPM3-203ENST00000312970 LAMTOR2Q9Y2Q5 125 aa4.95□□□□□ -1.62
TPM3-203ENST00000312970 H0Y9J4 135 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 UBE2D1P51668 147 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 C2orf82Q6UX34 121 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
TPM3-203ENST00000312970 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 Q8N8P6 123 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 PACRGQ96M98 296 aaPredicted RBP4.94□□□□□ -1.62
TPM3-203ENST00000312970 C2orf88Q9BSF0 95 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 MAP1LC3AQ9H492 121 aa4.94□□□□□ -1.62
TPM3-203ENST00000312970 NDUFC2-KCTD14E9PQ53 114 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 MT-ND4LP03901 98 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 UBE2BP63146 152 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 C2orf66Q6UXQ4 117 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 Q6ZN92 141 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 CYSLTR1Q9Y271 337 aa4.93□□□□□ -1.62
TPM3-203ENST00000312970 IGLV1-50A0A075B6I6 118 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 K7EMI3 77 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 M0QXV9 152 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 CKS1BP61024 79 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 ORMDL2Q53FV1 153 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 C5orf47Q569G3 176 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
TPM3-203ENST00000312970 AMELXQ99217 191 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 V9GYY9 64 aa4.92□□□□□ -1.62
TPM3-203ENST00000312970 IGIPA6NJ69 53 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 G0S2P27469 103 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 SEC11AP67812 179 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 ZC2HC1BQ5TFG8 222 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 LINC00173Q6ZV60 143 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 FAM19A3Q7Z5A8 133 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 NXT2Q9NPJ8 142 aaKnown RBP4.91□□□□□ -1.62
TPM3-203ENST00000312970 TOMM7Q9P0U1 55 aa4.91□□□□□ -1.62
TPM3-203ENST00000312970 RAB14P61106 215 aa4.9□□□□□ -1.63
TPM3-203ENST00000312970 Q8IZM0 81 aa4.9□□□□□ -1.63
TPM3-203ENST00000312970 PPDPFQ9H3Y8 114 aa4.9□□□□□ -1.63
TPM3-203ENST00000312970 KRTAP1-4P0C5Y4 121 aa4.89□□□□□ -1.63
TPM3-203ENST00000312970 HERVK_113P63121 156 aa4.89□□□□□ -1.63
TPM3-203ENST00000312970 CARHSP1Q9Y2V2 147 aaKnown RBP4.89□□□□□ -1.63
TPM3-203ENST00000312970 C22orf24Q9Y442 160 aa4.89□□□□□ -1.63
TPM3-203ENST00000312970 NUPR1O60356 82 aa4.88□□□□□ -1.63
TPM3-203ENST00000312970 ZNF861PO60384 105 aa4.88□□□□□ -1.63
TPM3-203ENST00000312970 TOMM6Q96B49 74 aa4.88□□□□□ -1.63
TPM3-203ENST00000312970 TIMM17AQ99595 171 aa4.88□□□□□ -1.63
TPM3-203ENST00000312970 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
TPM3-203ENST00000312970 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
TPM3-203ENST00000312970 F8VRH5 84 aa4.87□□□□□ -1.63
TPM3-203ENST00000312970 BOD1L2Q8IYS8 172 aa4.87□□□□□ -1.63
TPM3-203ENST00000312970 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
TPM3-203ENST00000312970 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms