RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
SCFD1-201ENST00000311943 HERVK_113P63121 156 aa7.54□□□□□ -1.2
SCFD1-201ENST00000311943 TINCRA0A1B0GVN0 87 aa7.54□□□□□ -1.2
SCFD1-201ENST00000311943 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
SCFD1-201ENST00000311943 H0Y8G0 127 aa7.54□□□□□ -1.2
SCFD1-201ENST00000311943 NDUFA1O15239 70 aa7.54□□□□□ -1.2
SCFD1-201ENST00000311943 NPSP0C0P6 89 aa7.54□□□□□ -1.2
SCFD1-201ENST00000311943 MRPL35Q9NZE8 188 aaKnown RBP7.54□□□□□ -1.2
SCFD1-201ENST00000311943 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-201ENST00000311943 G0S2P27469 103 aa7.53□□□□□ -1.2
SCFD1-201ENST00000311943 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.2
SCFD1-201ENST00000311943 LOC107984640A0A0U1RRK4 108 aa7.52□□□□□ -1.2
SCFD1-201ENST00000311943 RPL37AP61513 92 aaKnown RBP7.52□□□□□ -1.2
SCFD1-201ENST00000311943 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.2
SCFD1-201ENST00000311943 PACRGQ96M98 296 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-201ENST00000311943 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SCFD1-201ENST00000311943 FABP4P15090 132 aa7.52□□□□□ -1.21
SCFD1-201ENST00000311943 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
SCFD1-201ENST00000311943 C9orf129Q5T035 196 aaKnown RBP7.52□□□□□ -1.21
SCFD1-201ENST00000311943 PHF5AQ7RTV0 110 aaKnown RBP7.52□□□□□ -1.21
SCFD1-201ENST00000311943 HSBP1O75506 76 aa7.51□□□□□ -1.21
SCFD1-201ENST00000311943 IGLC3P0DOY3 106 aa7.51□□□□□ -1.21
SCFD1-201ENST00000311943 CHCHD1Q96BP2 118 aaKnown RBP7.51□□□□□ -1.21
SCFD1-201ENST00000311943 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
SCFD1-201ENST00000311943 XAGE1AQ9HD64 81 aa7.51□□□□□ -1.21
SCFD1-201ENST00000311943 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
SCFD1-201ENST00000311943 RAB5BP61020 215 aa7.51□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 PRSS2P07478 247 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-201ENST00000311943 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-201ENST00000311943 Q8IZM0 81 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 IFI27L1Q96BM0 104 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
SCFD1-201ENST00000311943 A6NJY4 79 aa7.49□□□□□ -1.21
SCFD1-201ENST00000311943 CKS1BP61024 79 aa7.49□□□□□ -1.21
SCFD1-201ENST00000311943 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
SCFD1-201ENST00000311943 ZNF625Q96I27 306 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-201ENST00000311943 CHTOPQ9Y3Y2 248 aaKnown RBP7.49□□□□□ -1.21
SCFD1-201ENST00000311943 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
SCFD1-201ENST00000311943 ATP5LO75964 103 aa7.48□□□□□ -1.21
SCFD1-201ENST00000311943 SEC11AP67812 179 aa7.48□□□□□ -1.21
SCFD1-201ENST00000311943 TMEM170BQ5T4T1 132 aa7.48□□□□□ -1.21
SCFD1-201ENST00000311943 SERTAD4-AS1Q5TG53 156 aa7.48□□□□□ -1.21
SCFD1-201ENST00000311943 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
SCFD1-201ENST00000311943 ATP6V1G1O75348 118 aa7.47□□□□□ -1.21
SCFD1-201ENST00000311943 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
SCFD1-201ENST00000311943 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.22
SCFD1-201ENST00000311943 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
SCFD1-201ENST00000311943 ODF1Q14990 250 aa7.46□□□□□ -1.22
SCFD1-201ENST00000311943 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
SCFD1-201ENST00000311943 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
SCFD1-201ENST00000311943 LINC01549A6NIU2 74 aa7.45□□□□□ -1.22
SCFD1-201ENST00000311943 F8VRH5 84 aa7.45□□□□□ -1.22
SCFD1-201ENST00000311943 LEPROTL1O95214 131 aa7.45□□□□□ -1.22
SCFD1-201ENST00000311943 PRR3P79522 188 aaKnown RBP7.45□□□□□ -1.22
SCFD1-201ENST00000311943 A0A0U1RRA0 63 aa7.44□□□□□ -1.22
SCFD1-201ENST00000311943 PFN2P35080 140 aa7.44□□□□□ -1.22
SCFD1-201ENST00000311943 LINC00474Q9P2X8 69 aa7.44□□□□□ -1.22
SCFD1-201ENST00000311943 Q8NDZ9 215 aa7.44□□□□□ -1.22
SCFD1-201ENST00000311943 PSORS1C2Q9UIG4 136 aa7.44□□□□□ -1.22
SCFD1-201ENST00000311943 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
SCFD1-201ENST00000311943 TRAV12-1A0A0B4J245 112 aa7.42□□□□□ -1.22
SCFD1-201ENST00000311943 TSPEAR-AS2P59090 65 aa7.42□□□□□ -1.22
SCFD1-201ENST00000311943 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
SCFD1-201ENST00000311943 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-201ENST00000311943 F8WDY8 70 aa7.42□□□□□ -1.22
SCFD1-201ENST00000311943 H3BRM9 83 aa7.42□□□□□ -1.22
SCFD1-201ENST00000311943 M0QXV9 152 aa7.41□□□□□ -1.22
SCFD1-201ENST00000311943 GAGE10A6NGK3 116 aa7.39□□□□□ -1.23
SCFD1-201ENST00000311943 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
SCFD1-201ENST00000311943 C1orf137Q5JT78 98 aa7.39□□□□□ -1.23
SCFD1-201ENST00000311943 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
SCFD1-201ENST00000311943 CXCL5P42830 114 aa7.38□□□□□ -1.23
SCFD1-201ENST00000311943 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
SCFD1-201ENST00000311943 SRSF9Q13242 221 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCFD1-201ENST00000311943 J3QL48 77 aa7.37□□□□□ -1.23
SCFD1-201ENST00000311943 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
SCFD1-201ENST00000311943 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
SCFD1-201ENST00000311943 PKIGQ9Y2B9 76 aa7.37□□□□□ -1.23
SCFD1-201ENST00000311943 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-201ENST00000311943 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
SCFD1-201ENST00000311943 DAND5Q8N907 189 aa7.36□□□□□ -1.23
SCFD1-201ENST00000311943 SYS1-DBNDD2H3BUS1 97 aa7.35□□□□□ -1.23
SCFD1-201ENST00000311943 SMIM13P0DJ93 91 aa7.35□□□□□ -1.23
SCFD1-201ENST00000311943 UBE2BP63146 152 aa7.35□□□□□ -1.23
SCFD1-201ENST00000311943 TNXBP22105 4242 aa7.35□□□□□ -1.23
SCFD1-201ENST00000311943 C3orf79P0CE67 100 aa7.35□□□□□ -1.23
SCFD1-201ENST00000311943 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
SCFD1-201ENST00000311943 DPM2O94777 84 aa7.34□□□□□ -1.23
SCFD1-201ENST00000311943 IGKCP01834 107 aa7.34□□□□□ -1.23
SCFD1-201ENST00000311943 S100A1P23297 94 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms