RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 KRTAP26-1Q6PEX3 210 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 NDUFA12Q9UI09 145 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 FXYD2P54710 66 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 HSD52Q0P140 79 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 MIAQ16674 131 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
PTCD2-201ENST00000308077 KLK5Q9Y337 293 aaPredicted RBP4.67□□□□□ -1.66
PTCD2-201ENST00000308077 ZNF561-AS1K7EIQ3 104 aa4.66□□□□□ -1.66
PTCD2-201ENST00000308077 COX7A2LO14548 114 aa4.66□□□□□ -1.66
PTCD2-201ENST00000308077 SCGB1D4Q6XE38 83 aa4.66□□□□□ -1.66
PTCD2-201ENST00000308077 LINC01561Q8N1V8 128 aa4.66□□□□□ -1.66
PTCD2-201ENST00000308077 COX7B2Q8TF08 81 aa4.66□□□□□ -1.66
PTCD2-201ENST00000308077 Q9H8V8 135 aa4.66□□□□□ -1.66
PTCD2-201ENST00000308077 TRAV8-4A0A0B4J246 113 aa4.65□□□□□ -1.66
PTCD2-201ENST00000308077 A0A0J9YXY3 114 aa4.65□□□□□ -1.66
PTCD2-201ENST00000308077 NDUFA1O15239 70 aa4.65□□□□□ -1.66
PTCD2-201ENST00000308077 ORAOV1Q8WV07 137 aa4.65□□□□□ -1.66
PTCD2-201ENST00000308077 ZNF625Q96I27 306 aaPredicted RBP4.65□□□□□ -1.66
PTCD2-201ENST00000308077 TOMM7Q9P0U1 55 aa4.65□□□□□ -1.66
PTCD2-201ENST00000308077 DMBT1Q9UGM3 2413 aaPredicted RBP4.65□□□□□ -1.66
PTCD2-201ENST00000308077 IBA57-AS1B1ANH7 110 aa4.65□□□□□ -1.67
PTCD2-201ENST00000308077 K7ERJ3 54 aa4.65□□□□□ -1.67
PTCD2-201ENST00000308077 GCSHP23434 173 aa4.65□□□□□ -1.67
PTCD2-201ENST00000308077 LITAFQ99732 161 aa4.65□□□□□ -1.67
PTCD2-201ENST00000308077 KRTAP1-5Q9BYS1 174 aa4.65□□□□□ -1.67
PTCD2-201ENST00000308077 KIAA0087Q14695 138 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 CFAP161Q6P656 301 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 UBE2DNLQ8IWF7 75 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
PTCD2-201ENST00000308077 CDIP1Q9H305 208 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 Q9HAA7 133 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 MALP21145 153 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 Q8IZM0 81 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 CEND1Q8N111 149 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 MUC7Q8TAX7 377 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 C1orf43Q9BWL3 253 aa4.64□□□□□ -1.67
PTCD2-201ENST00000308077 SPANXB1Q9NS25 103 aaPredicted RBP4.64□□□□□ -1.67
PTCD2-201ENST00000308077 IGKV2D-24A0A075B6R9 120 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 ADAMTSL4-AS1Q5T5F5 129 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 HIST1H4GQ99525 98 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 TM2D2Q9BX73 214 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 COX11Q9Y6N1 276 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 TAL2Q16559 108 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 C2orf82Q6UX34 121 aa4.63□□□□□ -1.67
PTCD2-201ENST00000308077 HERV-K104P63124 156 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 SRSF9Q13242 221 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTCD2-201ENST00000308077 C6orf226Q5I0X4 101 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 C15orf56Q8N910 161 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 RAB37Q96AX2 223 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 LINC00526Q96FQ7 95 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 VPS13DQ5THJ4 4388 aa4.62□□□□□ -1.67
PTCD2-201ENST00000308077 A0A0U1RRA0 63 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 TMEM238C9JI98 176 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 TIMM17BO60830 172 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 APOMO95445 188 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 PRSS2P07478 247 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 SPAG11BQ08648 103 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 DAND5Q8N907 189 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 NHP2Q9NX24 153 aaKnown RBP4.61□□□□□ -1.67
PTCD2-201ENST00000308077 SPANXCQ9NY87 97 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 SMIM13P0DJ93 91 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 MEIG1Q5JSS6 88 aa4.61□□□□□ -1.67
PTCD2-201ENST00000308077 DNAH10Q8IVF4 4471 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 PTTG1IPP53801 180 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 NPC2P61916 151 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 HIGD2BQ4VC39 106 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 C10orf25Q5T742 122 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 MUSTN1Q8IVN3 82 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 A6NDN8 102 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 CXCL5P42830 114 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 CKS1BP61024 79 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 UNQ6190/PRO20217Q6UXQ8 127 aa4.6□□□□□ -1.67
PTCD2-201ENST00000308077 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
PTCD2-201ENST00000308077 NBDYA0A0U1RRE5 68 aa4.59□□□□□ -1.67
PTCD2-201ENST00000308077 H3BUT2 72 aa4.59□□□□□ -1.67
PTCD2-201ENST00000308077 C9orf116Q5BN46 136 aaPredicted RBP4.59□□□□□ -1.67
PTCD2-201ENST00000308077 SFTA2Q6UW10 78 aa4.59□□□□□ -1.67
PTCD2-201ENST00000308077 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
PTCD2-201ENST00000308077 RMI2Q96E14 147 aa4.59□□□□□ -1.67
PTCD2-201ENST00000308077 ERG28Q9UKR5 140 aa4.59□□□□□ -1.67
PTCD2-201ENST00000308077 GVQW2A0A096LPI5 108 aaPredicted RBP4.58□□□□□ -1.68
PTCD2-201ENST00000308077 A0A1B0GWB2 263 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 C9orf118A6NHY6 69 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 PFN2P35080 140 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 CIRBPQ14011 172 aaKnown RBP4.58□□□□□ -1.68
PTCD2-201ENST00000308077 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 A4D1N5 150 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 MIR7-3HGQ8N6C7 128 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 LINC00308Q8TCZ7 52 aa4.58□□□□□ -1.68
PTCD2-201ENST00000308077 CFC1BP0CG36 223 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 CFC1P0CG37 223 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 LINC00158P58513 81 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 WFDC2Q14508 124 aa4.57□□□□□ -1.68
PTCD2-201ENST00000308077 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms