RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 H3BRM9 83 aa6.14□□□□□ -1.43
RFX3-201ENST00000302303 APOMO95445 188 aa6.14□□□□□ -1.43
RFX3-201ENST00000302303 CNBPP62633 177 aaKnown RBP6.14□□□□□ -1.43
RFX3-201ENST00000302303 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
RFX3-201ENST00000302303 Q6ZRU5 148 aa6.14□□□□□ -1.43
RFX3-201ENST00000302303 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
RFX3-201ENST00000302303 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
RFX3-201ENST00000302303 E9PLD3 99 aa6.13□□□□□ -1.43
RFX3-201ENST00000302303 COX7B2Q8TF08 81 aa6.13□□□□□ -1.43
RFX3-201ENST00000302303 ZNF625Q96I27 306 aaPredicted RBP6.13□□□□□ -1.43
RFX3-201ENST00000302303 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
RFX3-201ENST00000302303 C20orf202A1L168 122 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 LEPROTO15243 131 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 SCGB1D1O95968 90 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 LINC01620Q4KN68 170 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 C14orf177Q52M58 125 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 TOMM7Q9P0U1 55 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 C6orf48Q9UBA6 75 aa6.12□□□□□ -1.43
RFX3-201ENST00000302303 EPPK1P58107 5090 aaKnown RBP6.12□□□□□ -1.43
RFX3-201ENST00000302303 C21orf62-AS1Q17RA5 79 aa6.11□□□□□ -1.43
RFX3-201ENST00000302303 C6orf226Q5I0X4 101 aa6.11□□□□□ -1.43
RFX3-201ENST00000302303 TTTY13Q9BZ97 58 aa6.11□□□□□ -1.43
RFX3-201ENST00000302303 F8WDY8 70 aa6.1□□□□□ -1.43
RFX3-201ENST00000302303 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
RFX3-201ENST00000302303 C9orf116Q5BN46 136 aaPredicted RBP6.1□□□□□ -1.43
RFX3-201ENST00000302303 SDIM1Q6ZPB5 146 aa6.1□□□□□ -1.43
RFX3-201ENST00000302303 J3QQQ9 107 aa6.09□□□□□ -1.43
RFX3-201ENST00000302303 CAMK2N2Q96S95 79 aa6.09□□□□□ -1.43
RFX3-201ENST00000302303 PRSS2P07478 247 aa6.09□□□□□ -1.44
RFX3-201ENST00000302303 AKR1D1P51857 326 aa6.09□□□□□ -1.44
RFX3-201ENST00000302303 RNF151Q2KHN1 245 aa6.09□□□□□ -1.44
RFX3-201ENST00000302303 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.44
RFX3-201ENST00000302303 CARD19Q96LW7 228 aa6.09□□□□□ -1.44
RFX3-201ENST00000302303 IGLV5-52A0A0A0MRZ9 124 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 PANO1I0J062 215 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 NDUFA1O15239 70 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 HERVK_113P61574 105 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 PCP2Q8IVA1 136 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 NDUFA12Q9UI09 145 aa6.08□□□□□ -1.44
RFX3-201ENST00000302303 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
RFX3-201ENST00000302303 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
RFX3-201ENST00000302303 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
RFX3-201ENST00000302303 CXCL5P42830 114 aa6.07□□□□□ -1.44
RFX3-201ENST00000302303 CKS1BP61024 79 aa6.07□□□□□ -1.44
RFX3-201ENST00000302303 FAM30AQ9NZY2 134 aa6.07□□□□□ -1.44
RFX3-201ENST00000302303 TP73-AS1Q9UF72 201 aa6.07□□□□□ -1.44
RFX3-201ENST00000302303 Q6ZRP5 223 aa6.06□□□□□ -1.44
RFX3-201ENST00000302303 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.05□□□□□ -1.44
RFX3-201ENST00000302303 GCSHP23434 173 aa6.05□□□□□ -1.44
RFX3-201ENST00000302303 NMUP48645 174 aa6.05□□□□□ -1.44
RFX3-201ENST00000302303 LITAFQ99732 161 aa6.05□□□□□ -1.44
RFX3-201ENST00000302303 PAM16Q9Y3D7 125 aa6.05□□□□□ -1.44
RFX3-201ENST00000302303 A0A096LNI7 61 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 LGALS3P17931 250 aaKnown RBP6.04□□□□□ -1.44
RFX3-201ENST00000302303 CIRBPQ14011 172 aaKnown RBP6.04□□□□□ -1.44
RFX3-201ENST00000302303 Q6ZSA8 131 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 KRTAP7-1Q8IUC3 87 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.04□□□□□ -1.44
RFX3-201ENST00000302303 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 NDUFC2-KCTD14E9PQ53 114 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 CHTF8P0CG12 524 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 HERV-K104P63124 156 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 SPATA45Q537H7 98 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 ADAMTSL4-AS1Q5T5F5 129 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 VAMP8Q9BV40 100 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
RFX3-201ENST00000302303 ZNF815PA8K554 130 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 EPM2AB3EWF7 344 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 COX8AP10176 69 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 PFN2P35080 140 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 C9orf129Q5T035 196 aaKnown RBP6.03□□□□□ -1.44
RFX3-201ENST00000302303 SFTA2Q6UW10 78 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 C14orf144Q96I85 54 aa6.03□□□□□ -1.44
RFX3-201ENST00000302303 LOC107984640A0A0U1RRK4 108 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 C16orf90A8MZG2 172 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 SMIM6P0DI80 62 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 PTTG1IPP53801 180 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 COX17Q14061 63 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 Q8NDZ9 215 aa6.02□□□□□ -1.45
RFX3-201ENST00000302303 HSPG2P98160 4391 aa6.01□□□□□ -1.45
RFX3-201ENST00000302303 A0A0U1RRA0 63 aa6.01□□□□□ -1.45
RFX3-201ENST00000302303 DLEU1O43261 78 aa6.01□□□□□ -1.45
RFX3-201ENST00000302303 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
RFX3-201ENST00000302303 A0A1W2PNN7 141 aa6□□□□□ -1.45
RFX3-201ENST00000302303 XGP55808 180 aa6□□□□□ -1.45
RFX3-201ENST00000302303 GAGE2BQ13066 116 aa6□□□□□ -1.45
RFX3-201ENST00000302303 SOSTDC1Q6X4U4 206 aa6□□□□□ -1.45
RFX3-201ENST00000302303 DAND5Q8N907 189 aa6□□□□□ -1.45
RFX3-201ENST00000302303 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
RFX3-201ENST00000302303 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
RFX3-201ENST00000302303 IGKV2-24A0A0C4DH68 120 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms