RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 I3L3M4 83 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 SERF1AO75920 110 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 TMEM101Q96IK0 257 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 TMEM191AQ9H0A3 160 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 TMEM238LA0A1B0GVL6 79 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 TMEM238C9JI98 176 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 UBE2D1P51668 147 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 RPL24P83731 157 aaKnown RBP3.79□□□□□ -1.8
ITGB1-201ENST00000302278 GAGE2BQ13066 116 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 LYZL1Q6UWQ5 148 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 TEX43Q6ZNM6 134 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 TIMM21Q9BVV7 248 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 CST9LQ9H4G1 147 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 MTURNQ8N3F0 131 aa3.79□□□□□ -1.8
ITGB1-201ENST00000302278 A6NDN8 102 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 COX7A2LO14548 114 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 PPBPP02775 128 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 POLR2KP53803 58 aaKnown RBP3.78□□□□□ -1.8
ITGB1-201ENST00000302278 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 ZNF861PO60384 105 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 CAMK2N2Q96S95 79 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 IGLC3P0DOY3 106 aa3.78□□□□□ -1.8
ITGB1-201ENST00000302278 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
ITGB1-201ENST00000302278 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
ITGB1-201ENST00000302278 FOXA3P55318 350 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-201ENST00000302278 CENPWQ5EE01 88 aa3.77□□□□□ -1.81
ITGB1-201ENST00000302278 GNG4P50150 75 aa3.77□□□□□ -1.81
ITGB1-201ENST00000302278 ATOH7Q8N100 152 aa3.77□□□□□ -1.81
ITGB1-201ENST00000302278 UBE2D4Q9Y2X8 147 aa3.77□□□□□ -1.81
ITGB1-201ENST00000302278 TNFRSF6BO95407 300 aa3.77□□□□□ -1.81
ITGB1-201ENST00000302278 MRAP2Q96G30 205 aa3.77□□□□□ -1.81
ITGB1-201ENST00000302278 IGKV3OR2-268A0A0C4DH90 116 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
ITGB1-201ENST00000302278 SMAGPQ0VAQ4 97 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 FAM104AQ969W3 186 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 FAM168BA1KXE4 195 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 H0Y8G0 127 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 FAM229BQ4G0N7 80 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 MRPL54Q6P161 138 aaKnown RBP3.76□□□□□ -1.81
ITGB1-201ENST00000302278 LINC01561Q8N1V8 128 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 KIAA1644Q3SXP7 199 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 PMCHL2Q9BQD1 86 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 MAP1LC3CQ9BXW4 147 aa3.76□□□□□ -1.81
ITGB1-201ENST00000302278 A0A087WZ39 114 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 A0A087X002 238 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 TRBV30A0A0K0K1B3 111 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 RPL32P62910 135 aaKnown RBP3.75□□□□□ -1.81
ITGB1-201ENST00000302278 SPAG11BQ08648 103 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 ASB16-AS1Q495Z4 193 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 SIGMAR1Q99720 223 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 GNB1LQ9BYB4 327 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 ST20Q9HBF5 79 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 C6orf48Q9UBA6 75 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 TP73-AS1Q9UF72 201 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 IGHV3OR16-9A0A0B4J2B5 98 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 C3orf79P0CE67 100 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 FABP2P12104 132 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 KIAA0087Q14695 138 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 FA2HQ7L5A8 372 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 ERASQ7Z444 233 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 MALP21145 153 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 CT83Q5H943 113 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 FAM231DQ6ZW35 169 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 HSPB8Q9UJY1 196 aa3.75□□□□□ -1.81
ITGB1-201ENST00000302278 M0QXV9 152 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 NDUFA1O15239 70 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 SEC11AP67812 179 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 MRPS36P82909 103 aaKnown RBP3.74□□□□□ -1.81
ITGB1-201ENST00000302278 TWIST1Q15672 202 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
ITGB1-201ENST00000302278 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 KRTAP13-2Q52LG2 175 aa3.74□□□□□ -1.81
ITGB1-201ENST00000302278 NDUFC2-KCTD14E9PQ53 114 aa3.73□□□□□ -1.81
ITGB1-201ENST00000302278 CRYGAP11844 174 aa3.73□□□□□ -1.81
ITGB1-201ENST00000302278 C10orf25Q5T742 122 aa3.73□□□□□ -1.81
ITGB1-201ENST00000302278 LCE2CQ5TA81 110 aa3.73□□□□□ -1.81
ITGB1-201ENST00000302278 FP248Q71RG6 208 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-201ENST00000302278 OCC1Q8TAD7 63 aa3.73□□□□□ -1.81
ITGB1-201ENST00000302278 OPRPNQ99935 248 aaPredicted RBP3.73□□□□□ -1.81
ITGB1-201ENST00000302278 TPPP3Q9BW30 176 aa3.73□□□□□ -1.81
ITGB1-201ENST00000302278 RNASE7Q9H1E1 156 aaKnown RBP3.72□□□□□ -1.81
ITGB1-201ENST00000302278 SPCS1Q9Y6A9 102 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 K7EN84 100 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 SCGB1A1P11684 91 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 Q6ZVH6 145 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 FAM19A5Q7Z5A7 132 aaPredicted RBP3.72□□□□□ -1.81
ITGB1-201ENST00000302278 NRACQ8N912 160 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 H3BUT2 72 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 PPP1R17O96001 155 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 CKS1BP61024 79 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
ITGB1-201ENST00000302278 TYMSOSQ8TAI1 123 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms