RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 Q6ZRU5 148 aa5.03□□□□□ -1.6
RAG1-201ENST00000299440 GAS8-AS1O95177 125 aa5.03□□□□□ -1.6
RAG1-201ENST00000299440 NDUFC2-KCTD14E9PQ53 114 aa5.03□□□□□ -1.6
RAG1-201ENST00000299440 FAM30AQ9NZY2 134 aa5.03□□□□□ -1.6
RAG1-201ENST00000299440 PRYO14603 147 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 Q6ZSN1 163 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 K7EIL1 84 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 K7ERS5 55 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 NRACQ8N912 160 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 HIGD1BQ9P298 99 aa5.02□□□□□ -1.61
RAG1-201ENST00000299440 POLR2KP53803 58 aaKnown RBP5.01□□□□□ -1.61
RAG1-201ENST00000299440 LINC00242Q5T6M2 205 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 FAM19A3Q7Z5A8 133 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 ANKRD17O75179 2603 aaKnown RBP5.01□□□□□ -1.61
RAG1-201ENST00000299440 SMIM11BQ8TCY0 68 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 PTH2Q96A98 100 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 FAM236AA0A1B0GUQ0 79 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 FAM236BA0A1B0GV22 79 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 H3BT86 120 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 CHTF8P0CG12 524 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 MUC4Q99102 2169 aa5.01□□□□□ -1.61
RAG1-201ENST00000299440 SMR3BP02814 79 aaPredicted RBP5□□□□□ -1.61
RAG1-201ENST00000299440 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
RAG1-201ENST00000299440 COA6Q5JTJ3 125 aaKnown RBP5□□□□□ -1.61
RAG1-201ENST00000299440 ENHOQ6UWT2 76 aa5□□□□□ -1.61
RAG1-201ENST00000299440 SERP1Q9Y6X1 66 aa5□□□□□ -1.61
RAG1-201ENST00000299440 COL4A2P08572 1712 aa5□□□□□ -1.61
RAG1-201ENST00000299440 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 TEN1Q86WV5 123 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 SPINK1P00995 79 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 NDUFV3P56181 108 aaKnown RBP4.99□□□□□ -1.61
RAG1-201ENST00000299440 WFDC2Q14508 124 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 C22orf24Q9Y442 160 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 LINC00588Q9Y4M8 146 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 TRIAP1O43715 76 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 CDPF1Q6NVV7 123 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 SDIM1Q6ZPB5 146 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 Q8N9L7 120 aa4.99□□□□□ -1.61
RAG1-201ENST00000299440 KRTAP10-11P60412 298 aa4.98□□□□□ -1.61
RAG1-201ENST00000299440 MAPKAPK5-AS1Q8N8E1 139 aa4.98□□□□□ -1.61
RAG1-201ENST00000299440 MRPS12O15235 138 aaKnown RBP4.98□□□□□ -1.61
RAG1-201ENST00000299440 DEFB116Q30KQ4 102 aa4.98□□□□□ -1.61
RAG1-201ENST00000299440 ATOX1O00244 68 aa4.98□□□□□ -1.61
RAG1-201ENST00000299440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.98□□□□□ -1.61
RAG1-201ENST00000299440 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
RAG1-201ENST00000299440 MOBPQ13875 183 aa4.97□□□□□ -1.61
RAG1-201ENST00000299440 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
RAG1-201ENST00000299440 Q6ZRP5 223 aa4.97□□□□□ -1.61
RAG1-201ENST00000299440 GOLGB1Q14789 3259 aaKnown RBP4.97□□□□□ -1.61
RAG1-201ENST00000299440 PHF5AQ7RTV0 110 aaKnown RBP4.97□□□□□ -1.61
RAG1-201ENST00000299440 HCFC1P51610 2035 aa4.97□□□□□ -1.61
RAG1-201ENST00000299440 A0A087WSZ3 146 aa4.96□□□□□ -1.61
RAG1-201ENST00000299440 A0A1B0GUV1 79 aa4.96□□□□□ -1.61
RAG1-201ENST00000299440 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.61
RAG1-201ENST00000299440 CRYGAP11844 174 aa4.96□□□□□ -1.62
RAG1-201ENST00000299440 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
RAG1-201ENST00000299440 AGRNO00468 2067 aa4.96□□□□□ -1.62
RAG1-201ENST00000299440 SMIM20Q8N5G0 67 aa4.96□□□□□ -1.62
RAG1-201ENST00000299440 TP73-AS1Q9UF72 201 aa4.95□□□□□ -1.62
RAG1-201ENST00000299440 Q6JHZ5 121 aa4.95□□□□□ -1.62
RAG1-201ENST00000299440 F8WDY8 70 aa4.95□□□□□ -1.62
RAG1-201ENST00000299440 TIMM17BO60830 172 aa4.95□□□□□ -1.62
RAG1-201ENST00000299440 DNAH10OSP0CZ25 163 aa4.95□□□□□ -1.62
RAG1-201ENST00000299440 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
RAG1-201ENST00000299440 A8MTW9 85 aa4.94□□□□□ -1.62
RAG1-201ENST00000299440 Q8NAQ8 132 aa4.94□□□□□ -1.62
RAG1-201ENST00000299440 Q8N3U1 123 aa4.94□□□□□ -1.62
RAG1-201ENST00000299440 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
RAG1-201ENST00000299440 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
RAG1-201ENST00000299440 CDIP1Q9H305 208 aa4.93□□□□□ -1.62
RAG1-201ENST00000299440 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
RAG1-201ENST00000299440 IGIPA6NJ69 53 aa4.93□□□□□ -1.62
RAG1-201ENST00000299440 EML5Q05BV3 1969 aa4.93□□□□□ -1.62
RAG1-201ENST00000299440 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
RAG1-201ENST00000299440 KIF25-AS1Q9Y6Z4 181 aa4.93□□□□□ -1.62
RAG1-201ENST00000299440 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
RAG1-201ENST00000299440 LINC00167Q96N53 147 aa4.92□□□□□ -1.62
RAG1-201ENST00000299440 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
RAG1-201ENST00000299440 SERP2Q8N6R1 65 aa4.91□□□□□ -1.62
RAG1-201ENST00000299440 H3BNG1 76 aa4.91□□□□□ -1.62
RAG1-201ENST00000299440 PTPRBP23467 1997 aa4.91□□□□□ -1.62
RAG1-201ENST00000299440 LINC01547P58512 204 aaPredicted RBP4.91□□□□□ -1.62
RAG1-201ENST00000299440 KRTAP10-3P60369 221 aa4.91□□□□□ -1.62
RAG1-201ENST00000299440 CSDC2Q9Y534 153 aaKnown RBP4.91□□□□□ -1.62
RAG1-201ENST00000299440 TAX1BP3O14907 124 aa4.9□□□□□ -1.62
RAG1-201ENST00000299440 NTM-AS1Q6ZSK4 140 aa4.9□□□□□ -1.62
RAG1-201ENST00000299440 USP24Q9UPU5 2620 aa4.9□□□□□ -1.62
RAG1-201ENST00000299440 PCOTHQ58A44 107 aa4.9□□□□□ -1.62
RAG1-201ENST00000299440 CNFNQ9BYD5 112 aa4.9□□□□□ -1.63
RAG1-201ENST00000299440 B5MCH6 92 aa4.9□□□□□ -1.63
RAG1-201ENST00000299440 Q8N814 137 aa4.9□□□□□ -1.63
RAG1-201ENST00000299440 CPAMD8Q8IZJ3 1885 aa4.89□□□□□ -1.63
RAG1-201ENST00000299440 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
RAG1-201ENST00000299440 LINC00336Q6ZUF6 198 aa4.89□□□□□ -1.63
RAG1-201ENST00000299440 ATP11AUNQ6ZP68 121 aa4.89□□□□□ -1.63
RAG1-201ENST00000299440 TM2D3Q9BRN9 247 aa4.88□□□□□ -1.63
RAG1-201ENST00000299440 A0A087WYN8 130 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms