RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 Q6ZRN7 208 aaPredicted RBP16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 NTN5Q8WTR8 489 aaPredicted RBP16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 GVQW2A0A096LPI5 108 aaPredicted RBP16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 C6orf223Q8N319 242 aa16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 LINC00526Q96FQ7 95 aa16.23■□□□□ 0.19
GTF2A1-201ENST00000298173 CKS1BP61024 79 aa16.22■□□□□ 0.19
GTF2A1-201ENST00000298173 LITAFQ99732 161 aa16.22■□□□□ 0.19
GTF2A1-201ENST00000298173 USP17L23D6RBM5 183 aa16.21■□□□□ 0.19
GTF2A1-201ENST00000298173 HIGD2BQ4VC39 106 aa16.21■□□□□ 0.19
GTF2A1-201ENST00000298173 LINC00587B1AMM8 73 aa16.21■□□□□ 0.18
GTF2A1-201ENST00000298173 ZNF561-AS1K7EIQ3 104 aa16.21■□□□□ 0.18
GTF2A1-201ENST00000298173 TIMM17BO60830 172 aa16.2■□□□□ 0.18
GTF2A1-201ENST00000298173 C2orf48Q96LS8 159 aa16.19■□□□□ 0.18
GTF2A1-201ENST00000298173 SPANXB1Q9NS25 103 aaPredicted RBP16.19■□□□□ 0.18
GTF2A1-201ENST00000298173 ADAMTSL4-AS1Q5T5F5 129 aa16.18■□□□□ 0.18
GTF2A1-201ENST00000298173 C10orf25Q5T742 122 aa16.18■□□□□ 0.18
GTF2A1-201ENST00000298173 UNQ6190/PRO20217Q6UXQ8 127 aa16.18■□□□□ 0.18
GTF2A1-201ENST00000298173 PSCAO43653 123 aa16.18■□□□□ 0.18
GTF2A1-201ENST00000298173 F8WDY8 70 aa16.16■□□□□ 0.18
GTF2A1-201ENST00000298173 WFDC2Q14508 124 aa16.16■□□□□ 0.18
GTF2A1-201ENST00000298173 TAL2Q16559 108 aa16.16■□□□□ 0.18
GTF2A1-201ENST00000298173 TMEM238C9JI98 176 aa16.15■□□□□ 0.18
GTF2A1-201ENST00000298173 HSD52Q0P140 79 aa16.15■□□□□ 0.18
GTF2A1-201ENST00000298173 CIRBPQ14011 172 aaKnown RBP16.14■□□□□ 0.18
GTF2A1-201ENST00000298173 DNAH2Q9P225 4427 aa16.14■□□□□ 0.18
GTF2A1-201ENST00000298173 LRCOL1A6NCL2 159 aa16.14■□□□□ 0.17
GTF2A1-201ENST00000298173 LECT2O14960 151 aa16.14■□□□□ 0.17
GTF2A1-201ENST00000298173 SMIM13P0DJ93 91 aa16.14■□□□□ 0.17
GTF2A1-201ENST00000298173 MEIG1Q5JSS6 88 aa16.14■□□□□ 0.17
GTF2A1-201ENST00000298173 CAMK2N2Q96S95 79 aa16.13■□□□□ 0.17
GTF2A1-201ENST00000298173 HIST1H4GQ99525 98 aa16.13■□□□□ 0.17
GTF2A1-201ENST00000298173 ERG28Q9UKR5 140 aa16.13■□□□□ 0.17
GTF2A1-201ENST00000298173 SLPIP03973 132 aa16.12■□□□□ 0.17
GTF2A1-201ENST00000298173 SRSF9Q13242 221 aaKnown RBP eCLIP16.12■□□□□ 0.17
GTF2A1-201ENST00000298173 SPANXDQ9BXN6 97 aa16.12■□□□□ 0.17
GTF2A1-201ENST00000298173 SPANXCQ9NY87 97 aa16.12■□□□□ 0.17
GTF2A1-201ENST00000298173 C6orf48Q9UBA6 75 aa16.11■□□□□ 0.17
GTF2A1-201ENST00000298173 Q6ZRU5 148 aa16.11■□□□□ 0.17
GTF2A1-201ENST00000298173 Q6ZVH6 145 aa16.11■□□□□ 0.17
GTF2A1-201ENST00000298173 TRBV30A0A0K0K1B3 111 aa16.1■□□□□ 0.17
GTF2A1-201ENST00000298173 A0A0U1RRA0 63 aa16.1■□□□□ 0.17
GTF2A1-201ENST00000298173 COX17Q14061 63 aa16.1■□□□□ 0.17
GTF2A1-201ENST00000298173 C9orf116Q5BN46 136 aaPredicted RBP16.1■□□□□ 0.17
GTF2A1-201ENST00000298173 C1orf134Q5TEV5 83 aa16.1■□□□□ 0.17
GTF2A1-201ENST00000298173 HYDINQ4G0P3 5121 aa16.09■□□□□ 0.17
GTF2A1-201ENST00000298173 HINT1P49773 126 aaPredicted RBP16.09■□□□□ 0.17
GTF2A1-201ENST00000298173 BVES-AS1Q5T3Y7 98 aa16.09■□□□□ 0.17
GTF2A1-201ENST00000298173 CEND1Q8N111 149 aa16.09■□□□□ 0.17
GTF2A1-201ENST00000298173 PFN2P35080 140 aa16.08■□□□□ 0.17
GTF2A1-201ENST00000298173 SYCNQ0VAF6 134 aa16.08■□□□□ 0.17
GTF2A1-201ENST00000298173 DAND5Q8N907 189 aa16.08■□□□□ 0.17
GTF2A1-201ENST00000298173 PTTG1IPP53801 180 aa16.08■□□□□ 0.16
GTF2A1-201ENST00000298173 LINC00158P58513 81 aa16.07■□□□□ 0.16
GTF2A1-201ENST00000298173 SNHG12Q9BXW3 62 aa16.07■□□□□ 0.16
GTF2A1-201ENST00000298173 SACSQ9NZJ4 4579 aa16.06■□□□□ 0.16
GTF2A1-201ENST00000298173 MUSTN1Q8IVN3 82 aa16.06■□□□□ 0.16
GTF2A1-201ENST00000298173 GCSHP23434 173 aa16.05■□□□□ 0.16
GTF2A1-201ENST00000298173 C14orf177Q52M58 125 aa16.05■□□□□ 0.16
GTF2A1-201ENST00000298173 MIR7-3HGQ8N6C7 128 aa16.05■□□□□ 0.16
GTF2A1-201ENST00000298173 LCE6AA0A183 80 aa16.05■□□□□ 0.16
GTF2A1-201ENST00000298173 M0R143 59 aa16.05■□□□□ 0.16
GTF2A1-201ENST00000298173 EIF4EBP3O60516 100 aaPredicted RBP16.05■□□□□ 0.16
GTF2A1-201ENST00000298173 IFITM1P13164 125 aa16.04■□□□□ 0.16
GTF2A1-201ENST00000298173 FXYD2P54710 66 aa16.04■□□□□ 0.16
GTF2A1-201ENST00000298173 RNF151Q2KHN1 245 aa16.04■□□□□ 0.16
GTF2A1-201ENST00000298173 LINC00308Q8TCZ7 52 aa16.03■□□□□ 0.16
GTF2A1-201ENST00000298173 SOSTDC1Q6X4U4 206 aa16.02■□□□□ 0.16
GTF2A1-201ENST00000298173 CARD19Q96LW7 228 aa16.02■□□□□ 0.16
GTF2A1-201ENST00000298173 CNBPP62633 177 aaKnown RBP16.02■□□□□ 0.15
GTF2A1-201ENST00000298173 PPDPFQ9H3Y8 114 aa16.02■□□□□ 0.15
GTF2A1-201ENST00000298173 A0A087WTM6 91 aa16.01■□□□□ 0.15
GTF2A1-201ENST00000298173 DNAH17Q9UFH2 4485 aa16.01■□□□□ 0.15
GTF2A1-201ENST00000298173 EREGO14944 169 aa16■□□□□ 0.15
GTF2A1-201ENST00000298173 NPC2P61916 151 aa16■□□□□ 0.15
GTF2A1-201ENST00000298173 LOC107984156A0A0G2JMH3 177 aa15.99■□□□□ 0.15
GTF2A1-201ENST00000298173 ARL17AQ8IVW1 177 aa15.99■□□□□ 0.15
GTF2A1-201ENST00000298173 BATFQ16520 125 aa15.98■□□□□ 0.15
GTF2A1-201ENST00000298173 Q8N814 137 aa15.98■□□□□ 0.15
GTF2A1-201ENST00000298173 RPL24P83731 157 aaKnown RBP15.97■□□□□ 0.15
GTF2A1-201ENST00000298173 NDUFC2-KCTD14E9PQ53 114 aa15.96■□□□□ 0.15
GTF2A1-201ENST00000298173 RTL8CO15255 209 aa15.96■□□□□ 0.15
GTF2A1-201ENST00000298173 TLX1NBP0CAT3 122 aa15.96■□□□□ 0.15
GTF2A1-201ENST00000298173 COPS9Q8WXC6 57 aa15.96■□□□□ 0.15
GTF2A1-201ENST00000298173 SND1-IT1Q9HBX3 110 aa15.96■□□□□ 0.15
GTF2A1-201ENST00000298173 A4D1N5 150 aa15.95■□□□□ 0.14
GTF2A1-201ENST00000298173 FRAS1Q86XX4 4008 aa15.95■□□□□ 0.14
GTF2A1-201ENST00000298173 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.94■□□□□ 0.14
GTF2A1-201ENST00000298173 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.93■□□□□ 0.14
GTF2A1-201ENST00000298173 Q6ZRP5 223 aa15.93■□□□□ 0.14
GTF2A1-201ENST00000298173 TMEM238LA0A1B0GVL6 79 aa15.92■□□□□ 0.14
GTF2A1-201ENST00000298173 A6NJY4 79 aa15.92■□□□□ 0.14
GTF2A1-201ENST00000298173 A0A1B0GWB2 263 aa15.92■□□□□ 0.14
GTF2A1-201ENST00000298173 TNP2Q05952 138 aa15.9■□□□□ 0.14
GTF2A1-201ENST00000298173 NHP2Q9NX24 153 aaKnown RBP15.9■□□□□ 0.14
GTF2A1-201ENST00000298173 A6NDN8 102 aa15.89■□□□□ 0.13
GTF2A1-201ENST00000298173 CFC1BP0CG36 223 aa15.89■□□□□ 0.13
GTF2A1-201ENST00000298173 CFC1P0CG37 223 aa15.89■□□□□ 0.13
GTF2A1-201ENST00000298173 C9orf163Q8N9P6 203 aa15.89■□□□□ 0.13
GTF2A1-201ENST00000298173 XAGE1AQ9HD64 81 aa15.86■□□□□ 0.13
GTF2A1-201ENST00000298173 LOC107984640A0A0U1RRK4 108 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms