RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 LELP1Q5T871 98 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 LOC101927531A0A1B0GV80 90 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 PRO0461Q9UI25 63 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 AVPP01185 164 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 LINC00205P59089 165 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 ZNF702PQ9H963 129 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 LINC00846Q9NV44 126 aa3.55□□□□□ -1.84
CSMD3-201ENST00000297405 PIP4P1Q86T03 277 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 K7EQG2 157 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 PRB1P04280 392 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 Q1T7F1 81 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 ZNF581Q9P0T4 197 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 C11orf72Q8NBR9 251 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 ODF3L1Q8IXM7 274 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 CDC42SE2Q9NRR3 84 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 PRR4Q16378 134 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 C6orf48Q9UBA6 75 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 DCANP1Q8TF63 244 aa3.54□□□□□ -1.84
CSMD3-201ENST00000297405 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
CSMD3-201ENST00000297405 FBXL19-AS1Q494R0 122 aa3.53□□□□□ -1.84
CSMD3-201ENST00000297405 KPRPQ5T749 579 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-201ENST00000297405 WFDC13Q8IUB5 93 aa3.53□□□□□ -1.84
CSMD3-201ENST00000297405 CTSZQ9UBR2 303 aa3.53□□□□□ -1.84
CSMD3-201ENST00000297405 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
CSMD3-201ENST00000297405 BRD3OSQ6XYD6 125 aa3.53□□□□□ -1.84
CSMD3-201ENST00000297405 LINC00310P59036 64 aa3.53□□□□□ -1.85
CSMD3-201ENST00000297405 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 LY6LH3BQJ8 138 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 LINC00482Q8N8I6 264 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 IGLV5-45A0A087WSX0 123 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 RSPO4Q2I0M5 234 aaPredicted RBP3.52□□□□□ -1.85
CSMD3-201ENST00000297405 Q6ZS46 218 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 ODF3BA8MYP8 253 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 CRIP1P50238 77 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 LRBAP50851 2863 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 DEFB104AQ8WTQ1 72 aa3.52□□□□□ -1.85
CSMD3-201ENST00000297405 E7EUB6 86 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 ZNF295-AS1Q8N0V1 137 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 FAM19A1Q7Z5A9 133 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 SLPIP03973 132 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 RNASE3P12724 160 aaKnown RBP3.51□□□□□ -1.85
CSMD3-201ENST00000297405 EDN2P20800 178 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 COL4A5P29400 1685 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 TRBV7-4A0A0J9YYF1 115 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 IGLV5-39A0A0G2JS06 123 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 PINLYPA6NC86 204 aa3.51□□□□□ -1.85
CSMD3-201ENST00000297405 POM121L12Q8N7R1 296 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 MAP6D1Q9H9H5 199 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 NBEAL2Q6ZNJ1 2754 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 A0A087WVE0 104 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 PRAC2D3DTV9 90 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 TNFRSF13BO14836 293 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-201ENST00000297405 PATE3B3GLJ2 98 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 LINC00242Q5T6M2 205 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 LINC00336Q6ZUF6 198 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 LYNX1G3V0Z9 82 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 LYNX1P0DP58 116 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 IGLV2-18A0A075B6J9 118 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 FRYLO94915 3013 aa3.5□□□□□ -1.85
CSMD3-201ENST00000297405 Q8N7P7 452 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 DSPP15924 2871 aaKnown RBP3.49□□□□□ -1.85
CSMD3-201ENST00000297405 FRMD6-AS1P0C7T7 363 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 IGFL2Q6UWQ7 119 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 ZNRD1Q9P1U0 126 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 RPL37AP61513 92 aaKnown RBP3.49□□□□□ -1.85
CSMD3-201ENST00000297405 Q6ZRU5 148 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 LINC00959A0A1B0GUT2 108 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 TFF1P04155 84 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 TRAV10A0A0B4J240 114 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 A0A087WYN8 130 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 FAM229AH3BQW9 127 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 MDFIQ99750 246 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 Q8NBF4 154 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 PROK2Q9HC23 129 aa3.49□□□□□ -1.85
CSMD3-201ENST00000297405 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 LRCOL1A6NCL2 159 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 Q6ZQT0 140 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 FAM19A4Q96LR4 140 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 SMAD5-AS1Q9Y6J3 95 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 LY6G6DO95868 133 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 H7BZZ5 65 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 ARTNQ5T4W7 220 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 Q6ZSV7 163 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 COL4A3Q01955 1670 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 C11orf45Q8TAV5 145 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 LINC01600Q96MT4 127 aa3.48□□□□□ -1.85
CSMD3-201ENST00000297405 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 LOC100131303A0A0U1RQF7 123 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 RITA1Q96K30 269 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 C11orf71Q6IPW1 123 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 PCNTO95613 3336 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 FHL2Q14192 279 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 DNAH12Q6ZR08 3092 aa3.47□□□□□ -1.85
CSMD3-201ENST00000297405 LINC00337Q8N6G1 96 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms