RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 LINC00528Q8N1L1 170 aa10.66□□□□□ -0.7
NPM1-201ENST00000296930 CDKN2A-AS1Q9UH64 79 aa10.66□□□□□ -0.7
NPM1-201ENST00000296930 CCL25O15444 150 aa10.65□□□□□ -0.7
NPM1-201ENST00000296930 SS18Q15532 418 aa10.65□□□□□ -0.7
NPM1-201ENST00000296930 LINC00469Q8N7U9 141 aa10.65□□□□□ -0.7
NPM1-201ENST00000296930 IGLV10-54A0A075B6I4 117 aa10.65□□□□□ -0.71
NPM1-201ENST00000296930 IGHV3OR16-9A0A0B4J2B5 98 aa10.65□□□□□ -0.71
NPM1-201ENST00000296930 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.71
NPM1-201ENST00000296930 SPATA45Q537H7 98 aa10.65□□□□□ -0.71
NPM1-201ENST00000296930 SCXQ7RTU7 201 aa10.65□□□□□ -0.71
NPM1-201ENST00000296930 XCL1P47992 114 aa10.64□□□□□ -0.71
NPM1-201ENST00000296930 CHCHD10Q8WYQ3 142 aaPredicted RBP10.64□□□□□ -0.71
NPM1-201ENST00000296930 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
NPM1-201ENST00000296930 IGKV2D-26A0A0A0MRZ7 120 aa10.62□□□□□ -0.71
NPM1-201ENST00000296930 USP17L23D6RBM5 183 aa10.62□□□□□ -0.71
NPM1-201ENST00000296930 TRAV8-4A0A0B4J246 113 aa10.62□□□□□ -0.71
NPM1-201ENST00000296930 E9PLD3 99 aa10.61□□□□□ -0.71
NPM1-201ENST00000296930 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
NPM1-201ENST00000296930 H3BRM9 83 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 SPINK8P0C7L1 97 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 HERVK_113P61574 105 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 A0A087WZ39 114 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 SMIM1B2RUZ4 78 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 FOXI1Q12951 378 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 KRTAP26-1Q6PEX3 210 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 C5orf38Q86SI9 138 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 CIRBP-AS1Q8TBR5 109 aa10.6□□□□□ -0.71
NPM1-201ENST00000296930 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
NPM1-201ENST00000296930 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
NPM1-201ENST00000296930 NMUP48645 174 aa10.58□□□□□ -0.72
NPM1-201ENST00000296930 IGHV1-58A0A0C4DH39 117 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 J3QL48 77 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 TTTY13Q9BZ97 58 aa10.57□□□□□ -0.72
NPM1-201ENST00000296930 COX7A2LO14548 114 aa10.56□□□□□ -0.72
NPM1-201ENST00000296930 LEPROTO15243 131 aa10.56□□□□□ -0.72
NPM1-201ENST00000296930 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
NPM1-201ENST00000296930 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
NPM1-201ENST00000296930 TP73-AS1Q9UF72 201 aa10.56□□□□□ -0.72
NPM1-201ENST00000296930 COX8AP10176 69 aa10.55□□□□□ -0.72
NPM1-201ENST00000296930 LINC01561Q8N1V8 128 aa10.55□□□□□ -0.72
NPM1-201ENST00000296930 KRTAP29-1A8MX34 341 aaPredicted RBP10.54□□□□□ -0.72
NPM1-201ENST00000296930 J3QQQ9 107 aa10.54□□□□□ -0.72
NPM1-201ENST00000296930 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
NPM1-201ENST00000296930 TSTD3H0UI37 97 aa10.52□□□□□ -0.72
NPM1-201ENST00000296930 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.72
NPM1-201ENST00000296930 BOD1L2Q8IYS8 172 aa10.52□□□□□ -0.72
NPM1-201ENST00000296930 LGALS3P17931 250 aaKnown RBP10.51□□□□□ -0.73
NPM1-201ENST00000296930 MALP21145 153 aa10.51□□□□□ -0.73
NPM1-201ENST00000296930 SLC25A34Q6PIV7 304 aa10.51□□□□□ -0.73
NPM1-201ENST00000296930 DLEU1O43261 78 aa10.5□□□□□ -0.73
NPM1-201ENST00000296930 CNBPP62633 177 aaKnown RBP10.5□□□□□ -0.73
NPM1-201ENST00000296930 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
NPM1-201ENST00000296930 SDIM1Q6ZPB5 146 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 COX7B2Q8TF08 81 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 ORAOV1Q8WV07 137 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 MIEN1Q9BRT3 115 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
NPM1-201ENST00000296930 APOMO95445 188 aa10.48□□□□□ -0.73
NPM1-201ENST00000296930 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
NPM1-201ENST00000296930 Q8IZM0 81 aa10.48□□□□□ -0.73
NPM1-201ENST00000296930 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
NPM1-201ENST00000296930 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
NPM1-201ENST00000296930 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
NPM1-201ENST00000296930 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
NPM1-201ENST00000296930 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
NPM1-201ENST00000296930 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
NPM1-201ENST00000296930 NDUFA1O15239 70 aa10.46□□□□□ -0.74
NPM1-201ENST00000296930 CFAP161Q6P656 301 aa10.46□□□□□ -0.74
NPM1-201ENST00000296930 C2orf91Q6ZV80 131 aa10.46□□□□□ -0.74
NPM1-201ENST00000296930 PANO1I0J062 215 aa10.45□□□□□ -0.74
NPM1-201ENST00000296930 OXTP01178 125 aa10.45□□□□□ -0.74
NPM1-201ENST00000296930 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
NPM1-201ENST00000296930 PRSS2P07478 247 aa10.44□□□□□ -0.74
NPM1-201ENST00000296930 CIRBPQ14011 172 aaKnown RBP10.44□□□□□ -0.74
NPM1-201ENST00000296930 PCP4L1A6NKN8 68 aa10.44□□□□□ -0.74
NPM1-201ENST00000296930 SLPIP03973 132 aa10.44□□□□□ -0.74
NPM1-201ENST00000296930 DDTP30046 118 aa10.44□□□□□ -0.74
NPM1-201ENST00000296930 C6orf226Q5I0X4 101 aa10.44□□□□□ -0.74
NPM1-201ENST00000296930 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
NPM1-201ENST00000296930 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
NPM1-201ENST00000296930 C2orf82Q6UX34 121 aa10.43□□□□□ -0.74
NPM1-201ENST00000296930 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
NPM1-201ENST00000296930 GVQW2A0A096LPI5 108 aaPredicted RBP10.42□□□□□ -0.74
NPM1-201ENST00000296930 A0A0J9YXY3 114 aa10.42□□□□□ -0.74
NPM1-201ENST00000296930 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
NPM1-201ENST00000296930 SCGB1D4Q6XE38 83 aa10.42□□□□□ -0.74
NPM1-201ENST00000296930 DPH3Q96FX2 82 aa10.42□□□□□ -0.74
NPM1-201ENST00000296930 CXCL5P42830 114 aa10.41□□□□□ -0.74
NPM1-201ENST00000296930 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
NPM1-201ENST00000296930 CKS1BP61024 79 aa10.4□□□□□ -0.74
NPM1-201ENST00000296930 HERV-K104P63124 156 aa10.4□□□□□ -0.74
NPM1-201ENST00000296930 SFTA2Q6UW10 78 aa10.4□□□□□ -0.74
NPM1-201ENST00000296930 ZNF561-AS1K7EIQ3 104 aa10.39□□□□□ -0.75
NPM1-201ENST00000296930 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms