RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TET2Q6N021 2002 aaPredicted RBP8.31□□□□□ -1.08
SNIP1-201ENST00000296215 IGHV4-38-2P0DP08 117 aa8.31□□□□□ -1.08
SNIP1-201ENST00000296215 LINC01560Q8TB33 94 aa8.31□□□□□ -1.08
SNIP1-201ENST00000296215 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
SNIP1-201ENST00000296215 KLLNB2CW77 178 aa8.3□□□□□ -1.08
SNIP1-201ENST00000296215 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
SNIP1-201ENST00000296215 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
SNIP1-201ENST00000296215 C2orf16Q68DN1 1984 aa8.3□□□□□ -1.08
SNIP1-201ENST00000296215 H3BUX3 64 aa8.29□□□□□ -1.08
SNIP1-201ENST00000296215 Q8N9W7 124 aa8.29□□□□□ -1.08
SNIP1-201ENST00000296215 KIAA1549LQ6ZVL6 1849 aa8.29□□□□□ -1.08
SNIP1-201ENST00000296215 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
SNIP1-201ENST00000296215 C19orf84I3L1E1 186 aa8.29□□□□□ -1.08
SNIP1-201ENST00000296215 BRD3OSQ6XYD6 125 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 PTPN13Q12923 2485 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 NCOR2Q9Y618 2525 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 A8MTW9 85 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 PRAC1Q96KF2 57 aa8.28□□□□□ -1.08
SNIP1-201ENST00000296215 ELOF1P60002 83 aaKnown RBP8.27□□□□□ -1.09
SNIP1-201ENST00000296215 KLK12Q9UKR0 248 aa8.27□□□□□ -1.09
SNIP1-201ENST00000296215 MSMPQ1L6U9 139 aa8.26□□□□□ -1.09
SNIP1-201ENST00000296215 LINC00315P59091 139 aa8.26□□□□□ -1.09
SNIP1-201ENST00000296215 K7EQG2 157 aa8.26□□□□□ -1.09
SNIP1-201ENST00000296215 IGFL3Q6UXB1 125 aa8.26□□□□□ -1.09
SNIP1-201ENST00000296215 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
SNIP1-201ENST00000296215 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
SNIP1-201ENST00000296215 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
SNIP1-201ENST00000296215 COX17Q14061 63 aa8.25□□□□□ -1.09
SNIP1-201ENST00000296215 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
SNIP1-201ENST00000296215 IGHV4-61A0A0C4DH41 118 aa8.24□□□□□ -1.09
SNIP1-201ENST00000296215 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
SNIP1-201ENST00000296215 FASNP49327 2511 aaKnown RBP8.24□□□□□ -1.09
SNIP1-201ENST00000296215 SONP18583 2426 aaKnown RBP8.24□□□□□ -1.09
SNIP1-201ENST00000296215 H3BUA1 57 aa8.24□□□□□ -1.09
SNIP1-201ENST00000296215 DSCR9P59020 149 aa8.24□□□□□ -1.09
SNIP1-201ENST00000296215 COA5Q86WW8 74 aa8.24□□□□□ -1.09
SNIP1-201ENST00000296215 C1orf137Q5JT78 98 aa8.23□□□□□ -1.09
SNIP1-201ENST00000296215 Q8IZM0 81 aa8.23□□□□□ -1.09
SNIP1-201ENST00000296215 GYPEP15421 78 aa8.23□□□□□ -1.09
SNIP1-201ENST00000296215 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
SNIP1-201ENST00000296215 IGLV5-45A0A087WSX0 123 aa8.22□□□□□ -1.09
SNIP1-201ENST00000296215 IGHV4-30-4P0DP06 118 aa8.22□□□□□ -1.09
SNIP1-201ENST00000296215 IGHV4-31P0DP07 118 aa8.22□□□□□ -1.09
SNIP1-201ENST00000296215 LINC00313P59037 77 aa8.22□□□□□ -1.09
SNIP1-201ENST00000296215 A0A1B0GU69 56 aa8.21□□□□□ -1.09
SNIP1-201ENST00000296215 CMC4P56277 68 aaPredicted RBP8.21□□□□□ -1.09
SNIP1-201ENST00000296215 OBSCN-AS1Q96MR7 158 aa8.21□□□□□ -1.09
SNIP1-201ENST00000296215 Q6ZTC4 211 aa8.21□□□□□ -1.1
SNIP1-201ENST00000296215 COL4A4P53420 1690 aaPredicted RBP8.2□□□□□ -1.1
SNIP1-201ENST00000296215 Q5VV11 94 aa8.2□□□□□ -1.1
SNIP1-201ENST00000296215 EPM2AB3EWF7 344 aa8.2□□□□□ -1.1
SNIP1-201ENST00000296215 H3BPC8 53 aa8.2□□□□□ -1.1
SNIP1-201ENST00000296215 LINC00959A0A1B0GUT2 108 aa8.2□□□□□ -1.1
SNIP1-201ENST00000296215 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
SNIP1-201ENST00000296215 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
SNIP1-201ENST00000296215 PCSK5Q92824 1860 aa8.18□□□□□ -1.1
SNIP1-201ENST00000296215 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.18□□□□□ -1.1
SNIP1-201ENST00000296215 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
SNIP1-201ENST00000296215 Q75L30 129 aa8.18□□□□□ -1.1
SNIP1-201ENST00000296215 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
SNIP1-201ENST00000296215 CENPFP49454 3210 aa8.16□□□□□ -1.1
SNIP1-201ENST00000296215 KPRPQ5T749 579 aaPredicted RBP8.16□□□□□ -1.1
SNIP1-201ENST00000296215 OCR1Q9BZK8 76 aa8.15□□□□□ -1.1
SNIP1-201ENST00000296215 C5orf56Q8N8D9 126 aa8.14□□□□□ -1.11
SNIP1-201ENST00000296215 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
SNIP1-201ENST00000296215 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
SNIP1-201ENST00000296215 CPAMD8Q8IZJ3 1885 aa8.14□□□□□ -1.11
SNIP1-201ENST00000296215 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
SNIP1-201ENST00000296215 C1orf134Q5TEV5 83 aa8.14□□□□□ -1.11
SNIP1-201ENST00000296215 Q8N9P0 234 aaPredicted RBP8.14□□□□□ -1.11
SNIP1-201ENST00000296215 HIVEP2P31629 2446 aa8.13□□□□□ -1.11
SNIP1-201ENST00000296215 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
SNIP1-201ENST00000296215 LRRK2Q5S007 2527 aa8.12□□□□□ -1.11
SNIP1-201ENST00000296215 MOBPQ13875 183 aa8.11□□□□□ -1.11
SNIP1-201ENST00000296215 MRGPRG-AS1Q2M3A8 158 aa8.11□□□□□ -1.11
SNIP1-201ENST00000296215 Q6ZSN1 163 aa8.11□□□□□ -1.11
SNIP1-201ENST00000296215 DEFB114Q30KQ6 69 aa8.1□□□□□ -1.11
SNIP1-201ENST00000296215 C9orf66Q5T8R8 295 aa8.1□□□□□ -1.11
SNIP1-201ENST00000296215 PLA2G2CQ5R387 149 aa8.1□□□□□ -1.11
SNIP1-201ENST00000296215 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
SNIP1-201ENST00000296215 UNQ6190/PRO20217Q6UXQ8 127 aa8.1□□□□□ -1.11
SNIP1-201ENST00000296215 A0A096LNI7 61 aa8.08□□□□□ -1.12
SNIP1-201ENST00000296215 A0A1B0GW54 56 aa8.08□□□□□ -1.12
SNIP1-201ENST00000296215 M0R2N4 97 aa8.08□□□□□ -1.12
SNIP1-201ENST00000296215 LOC100131303A0A0U1RQF7 123 aa8.08□□□□□ -1.12
SNIP1-201ENST00000296215 A0A0C4DFX4 3053 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 CYSRT1A8MQ03 144 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 UQCR11O14957 56 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 IGKV2D-24A0A075B6R9 120 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 A0A087WSZ3 146 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 MUC4Q99102 2169 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 LY6G6DO95868 133 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 C11orf71Q6IPW1 123 aa8.07□□□□□ -1.12
SNIP1-201ENST00000296215 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
SNIP1-201ENST00000296215 ZNF702PQ9H963 129 aa8.06□□□□□ -1.12
SNIP1-201ENST00000296215 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
SNIP1-201ENST00000296215 ST20-AS1Q8NBB2 130 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms