RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 UNQ6190/PRO20217Q6UXQ8 127 aa10.32□□□□□ -0.76
MRPL55-201ENST00000295008 Q6ZRU5 148 aa10.32□□□□□ -0.76
MRPL55-201ENST00000295008 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
MRPL55-201ENST00000295008 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
MRPL55-201ENST00000295008 FAT2Q9NYQ8 4349 aa10.32□□□□□ -0.76
MRPL55-201ENST00000295008 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
MRPL55-201ENST00000295008 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
MRPL55-201ENST00000295008 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-201ENST00000295008 J3QQQ9 107 aa10.3□□□□□ -0.76
MRPL55-201ENST00000295008 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
MRPL55-201ENST00000295008 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
MRPL55-201ENST00000295008 LOC105371267A0A1B0GV96 52 aa10.29□□□□□ -0.76
MRPL55-201ENST00000295008 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
MRPL55-201ENST00000295008 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
MRPL55-201ENST00000295008 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
MRPL55-201ENST00000295008 HSBP1L1C9JCN9 74 aa10.28□□□□□ -0.76
MRPL55-201ENST00000295008 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
MRPL55-201ENST00000295008 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
MRPL55-201ENST00000295008 C9orf163Q8N9P6 203 aa10.28□□□□□ -0.76
MRPL55-201ENST00000295008 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
MRPL55-201ENST00000295008 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
MRPL55-201ENST00000295008 NDUFA12Q9UI09 145 aa10.27□□□□□ -0.77
MRPL55-201ENST00000295008 NMUP48645 174 aa10.26□□□□□ -0.77
MRPL55-201ENST00000295008 RNF151Q2KHN1 245 aa10.26□□□□□ -0.77
MRPL55-201ENST00000295008 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
MRPL55-201ENST00000295008 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-201ENST00000295008 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
MRPL55-201ENST00000295008 PKD1P98161 4303 aa10.25□□□□□ -0.77
MRPL55-201ENST00000295008 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
MRPL55-201ENST00000295008 VAMP8Q9BV40 100 aa10.24□□□□□ -0.77
MRPL55-201ENST00000295008 DNAH11Q96DT5 4516 aa10.24□□□□□ -0.77
MRPL55-201ENST00000295008 GCSHP23434 173 aa10.23□□□□□ -0.77
MRPL55-201ENST00000295008 PAM16Q9Y3D7 125 aa10.23□□□□□ -0.77
MRPL55-201ENST00000295008 ZNF815PA8K554 130 aa10.22□□□□□ -0.77
MRPL55-201ENST00000295008 C16orf90A8MZG2 172 aa10.22□□□□□ -0.77
MRPL55-201ENST00000295008 HERV-K104P63124 156 aa10.22□□□□□ -0.77
MRPL55-201ENST00000295008 ERG28Q9UKR5 140 aa10.22□□□□□ -0.77
MRPL55-201ENST00000295008 LOC107984640A0A0U1RRK4 108 aa10.21□□□□□ -0.77
MRPL55-201ENST00000295008 SPATA45Q537H7 98 aa10.21□□□□□ -0.77
MRPL55-201ENST00000295008 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
MRPL55-201ENST00000295008 PCP2Q8IVA1 136 aa10.21□□□□□ -0.77
MRPL55-201ENST00000295008 TLX1NBP0CAT3 122 aa10.2□□□□□ -0.78
MRPL55-201ENST00000295008 KRTAP10-1P60331 282 aa10.2□□□□□ -0.78
MRPL55-201ENST00000295008 RPL18AQ02543 176 aaKnown RBP10.2□□□□□ -0.78
MRPL55-201ENST00000295008 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
MRPL55-201ENST00000295008 PKIGQ9Y2B9 76 aa10.2□□□□□ -0.78
MRPL55-201ENST00000295008 NDUFC2-KCTD14E9PQ53 114 aa10.19□□□□□ -0.78
MRPL55-201ENST00000295008 SMIM6P0DI80 62 aa10.19□□□□□ -0.78
MRPL55-201ENST00000295008 PFN2P35080 140 aa10.19□□□□□ -0.78
MRPL55-201ENST00000295008 HECTD4Q9Y4D8 3996 aa10.19□□□□□ -0.78
MRPL55-201ENST00000295008 A0A096LNI7 61 aa10.18□□□□□ -0.78
MRPL55-201ENST00000295008 A0A0J9YXY3 114 aa10.18□□□□□ -0.78
MRPL55-201ENST00000295008 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
MRPL55-201ENST00000295008 Q6ZRP5 223 aa10.18□□□□□ -0.78
MRPL55-201ENST00000295008 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
MRPL55-201ENST00000295008 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
MRPL55-201ENST00000295008 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
MRPL55-201ENST00000295008 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
MRPL55-201ENST00000295008 PTTG1IPP53801 180 aa10.16□□□□□ -0.78
MRPL55-201ENST00000295008 LINC00158P58513 81 aa10.16□□□□□ -0.78
MRPL55-201ENST00000295008 COX17Q14061 63 aa10.16□□□□□ -0.78
MRPL55-201ENST00000295008 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
MRPL55-201ENST00000295008 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
MRPL55-201ENST00000295008 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
MRPL55-201ENST00000295008 PANO1I0J062 215 aa10.15□□□□□ -0.78
MRPL55-201ENST00000295008 COX8AP10176 69 aa10.15□□□□□ -0.78
MRPL55-201ENST00000295008 S100A12P80511 92 aa10.15□□□□□ -0.78
MRPL55-201ENST00000295008 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.15□□□□□ -0.78
MRPL55-201ENST00000295008 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
MRPL55-201ENST00000295008 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
MRPL55-201ENST00000295008 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
MRPL55-201ENST00000295008 C14orf144Q96I85 54 aa10.14□□□□□ -0.79
MRPL55-201ENST00000295008 FAM30AQ9NZY2 134 aa10.14□□□□□ -0.79
MRPL55-201ENST00000295008 Q6ZSA8 131 aa10.13□□□□□ -0.79
MRPL55-201ENST00000295008 SPACA4Q8TDM5 124 aa10.13□□□□□ -0.79
MRPL55-201ENST00000295008 XAGE1AQ9HD64 81 aa10.13□□□□□ -0.79
MRPL55-201ENST00000295008 DNAH5Q8TE73 4624 aa10.13□□□□□ -0.79
MRPL55-201ENST00000295008 TIMM17BO60830 172 aa10.12□□□□□ -0.79
MRPL55-201ENST00000295008 CIRBPQ14011 172 aaKnown RBP10.12□□□□□ -0.79
MRPL55-201ENST00000295008 C9orf129Q5T035 196 aaKnown RBP10.12□□□□□ -0.79
MRPL55-201ENST00000295008 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
MRPL55-201ENST00000295008 DAND5Q8N907 189 aa10.12□□□□□ -0.79
MRPL55-201ENST00000295008 LITAFQ99732 161 aa10.12□□□□□ -0.79
MRPL55-201ENST00000295008 SND1-IT1Q9HBX3 110 aa10.12□□□□□ -0.79
MRPL55-201ENST00000295008 DLEU1O43261 78 aa10.11□□□□□ -0.79
MRPL55-201ENST00000295008 ADAMTSL4-AS1Q5T5F5 129 aa10.11□□□□□ -0.79
MRPL55-201ENST00000295008 LINC00474Q9P2X8 69 aa10.11□□□□□ -0.79
MRPL55-201ENST00000295008 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
MRPL55-201ENST00000295008 C12orf57Q99622 126 aa10.09□□□□□ -0.79
MRPL55-201ENST00000295008 TMEM238C9JI98 176 aa10.08□□□□□ -0.8
MRPL55-201ENST00000295008 HAMPP81172 84 aa10.08□□□□□ -0.8
MRPL55-201ENST00000295008 FAM168BA1KXE4 195 aa10.07□□□□□ -0.8
MRPL55-201ENST00000295008 NPC2P61916 151 aa10.07□□□□□ -0.8
MRPL55-201ENST00000295008 DPH3Q96FX2 82 aa10.07□□□□□ -0.8
MRPL55-201ENST00000295008 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
MRPL55-201ENST00000295008 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
MRPL55-201ENST00000295008 HERC2O95714 4834 aa10.06□□□□□ -0.8
MRPL55-201ENST00000295008 A0A087WYN8 130 aa10.06□□□□□ -0.8
MRPL55-201ENST00000295008 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
MRPL55-201ENST00000295008 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms