RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PLXNA4Q9HCM2 1894 aa8.88□□□□□ -0.99
SLX4-201ENST00000294008 TET2Q6N021 2002 aaPredicted RBP8.88□□□□□ -0.99
SLX4-201ENST00000294008 KRTAP27-1Q3LI81 207 aa8.88□□□□□ -0.99
SLX4-201ENST00000294008 NRACQ8N912 160 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 CDIP1Q9H305 208 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 LYPD5Q6UWN5 251 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 SMIM29Q86T20 159 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 AGRNO00468 2067 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 ATG2AQ2TAZ0 1938 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
SLX4-201ENST00000294008 C1orf229Q6ZS94 237 aaPredicted RBP8.86□□□□□ -0.99
SLX4-201ENST00000294008 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
SLX4-201ENST00000294008 PHF5AQ7RTV0 110 aaKnown RBP8.84□□□□□ -0.99
SLX4-201ENST00000294008 RTL8CO15255 209 aa8.84□□□□□ -0.99
SLX4-201ENST00000294008 P0C879 139 aa8.84□□□□□ -0.99
SLX4-201ENST00000294008 GPR179Q6PRD1 2367 aa8.84□□□□□ -0.99
SLX4-201ENST00000294008 GAS8-AS1O95177 125 aa8.83□□□□□ -1
SLX4-201ENST00000294008 FHL3Q13643 280 aa8.83□□□□□ -1
SLX4-201ENST00000294008 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
SLX4-201ENST00000294008 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
SLX4-201ENST00000294008 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
SLX4-201ENST00000294008 CRIPTQ9P021 101 aa8.83□□□□□ -1
SLX4-201ENST00000294008 KIAA0087Q14695 138 aa8.83□□□□□ -1
SLX4-201ENST00000294008 IGLV6-57P01721 117 aa8.82□□□□□ -1
SLX4-201ENST00000294008 C11orf71Q6IPW1 123 aa8.82□□□□□ -1
SLX4-201ENST00000294008 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
SLX4-201ENST00000294008 ODF3L2Q3SX64 289 aa8.82□□□□□ -1
SLX4-201ENST00000294008 AVPP01185 164 aa8.81□□□□□ -1
SLX4-201ENST00000294008 HCFC1P51610 2035 aa8.81□□□□□ -1
SLX4-201ENST00000294008 Q8N2B8 174 aa8.81□□□□□ -1
SLX4-201ENST00000294008 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
SLX4-201ENST00000294008 C9orf129Q5T035 196 aaKnown RBP8.81□□□□□ -1
SLX4-201ENST00000294008 ABCA2Q9BZC7 2435 aa8.8□□□□□ -1
SLX4-201ENST00000294008 VPREB1P12018 145 aa8.8□□□□□ -1
SLX4-201ENST00000294008 ZFHX2Q9C0A1 2572 aaPredicted RBP8.8□□□□□ -1
SLX4-201ENST00000294008 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
SLX4-201ENST00000294008 BRWD1-AS2P59051 145 aa8.79□□□□□ -1
SLX4-201ENST00000294008 NOTCH4Q99466 2003 aa8.79□□□□□ -1
SLX4-201ENST00000294008 MUC6Q6W4X9 2439 aa8.79□□□□□ -1
SLX4-201ENST00000294008 CCDC168Q8NDH2 2452 aa8.79□□□□□ -1
SLX4-201ENST00000294008 Q8N6K4 173 aa8.78□□□□□ -1
SLX4-201ENST00000294008 DENND4CQ5VZ89 1909 aa8.78□□□□□ -1
SLX4-201ENST00000294008 C8orf87E5RJ46 101 aa8.78□□□□□ -1
SLX4-201ENST00000294008 PLXNA2O75051 1894 aa8.78□□□□□ -1
SLX4-201ENST00000294008 MUC7Q8TAX7 377 aa8.77□□□□□ -1
SLX4-201ENST00000294008 CHCHD7Q9BUK0 85 aa8.77□□□□□ -1.01
SLX4-201ENST00000294008 NOTCH2Q04721 2471 aa8.77□□□□□ -1.01
SLX4-201ENST00000294008 KLLNB2CW77 178 aa8.77□□□□□ -1.01
SLX4-201ENST00000294008 A0A0D9SG42 100 aa8.77□□□□□ -1.01
SLX4-201ENST00000294008 IGLV1-51P01701 117 aa8.77□□□□□ -1.01
SLX4-201ENST00000294008 M0R2T5 61 aa8.76□□□□□ -1.01
SLX4-201ENST00000294008 EIF4EBP1Q13541 118 aaPredicted RBP8.76□□□□□ -1.01
SLX4-201ENST00000294008 NUP210LQ5VU65 1888 aa8.76□□□□□ -1.01
SLX4-201ENST00000294008 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
SLX4-201ENST00000294008 ZNF580Q9UK33 172 aa8.76□□□□□ -1.01
SLX4-201ENST00000294008 SMR3BP02814 79 aaPredicted RBP8.75□□□□□ -1.01
SLX4-201ENST00000294008 Q6ZRP5 223 aa8.75□□□□□ -1.01
SLX4-201ENST00000294008 RAI1Q7Z5J4 1906 aaPredicted RBP8.75□□□□□ -1.01
SLX4-201ENST00000294008 PLXNB3Q9ULL4 1909 aa8.74□□□□□ -1.01
SLX4-201ENST00000294008 CDSNQ15517 529 aa8.74□□□□□ -1.01
SLX4-201ENST00000294008 PCDH15Q96QU1 1955 aa8.74□□□□□ -1.01
SLX4-201ENST00000294008 IGLV5-37A0A075B6J1 123 aa8.74□□□□□ -1.01
SLX4-201ENST00000294008 ZNF575Q86XF7 245 aa8.74□□□□□ -1.01
SLX4-201ENST00000294008 LINC01600Q96MT4 127 aa8.73□□□□□ -1.01
SLX4-201ENST00000294008 LINC00315P59091 139 aa8.73□□□□□ -1.01
SLX4-201ENST00000294008 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
SLX4-201ENST00000294008 SPATA3Q8NHX4 192 aa8.73□□□□□ -1.01
SLX4-201ENST00000294008 POLR2KP53803 58 aaKnown RBP8.72□□□□□ -1.01
SLX4-201ENST00000294008 Q6ZSN1 163 aa8.72□□□□□ -1.01
SLX4-201ENST00000294008 ADAMTSL4-AS1Q5T5F5 129 aa8.72□□□□□ -1.01
SLX4-201ENST00000294008 TTC28Q96AY4 2481 aa8.71□□□□□ -1.01
SLX4-201ENST00000294008 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
SLX4-201ENST00000294008 TP53AIP1Q9HCN2 124 aa8.7□□□□□ -1.02
SLX4-201ENST00000294008 Q8NBF4 154 aa8.69□□□□□ -1.02
SLX4-201ENST00000294008 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
SLX4-201ENST00000294008 NUP210Q8TEM1 1887 aaPredicted RBP8.68□□□□□ -1.02
SLX4-201ENST00000294008 TSPEAR-AS2P59090 65 aa8.68□□□□□ -1.02
SLX4-201ENST00000294008 CUL9Q8IWT3 2517 aa8.67□□□□□ -1.02
SLX4-201ENST00000294008 F8WDY8 70 aa8.67□□□□□ -1.02
SLX4-201ENST00000294008 YPEL4Q96NS1 127 aa8.67□□□□□ -1.02
SLX4-201ENST00000294008 CXCL6P80162 114 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 IGIPA6NJ69 53 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 CSNK1G2-AS1Q8NCQ2 148 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 WWC2-AS2Q96NR7 200 aa8.66□□□□□ -1.02
SLX4-201ENST00000294008 OBSCN-AS1Q96MR7 158 aa8.65□□□□□ -1.02
SLX4-201ENST00000294008 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
SLX4-201ENST00000294008 DSCR10P59022 87 aa8.65□□□□□ -1.02
SLX4-201ENST00000294008 TANC1Q9C0D5 1861 aa8.65□□□□□ -1.02
SLX4-201ENST00000294008 C16orf95Q9H693 158 aa8.65□□□□□ -1.03
SLX4-201ENST00000294008 ST20-AS1Q8NBB2 130 aa8.64□□□□□ -1.03
SLX4-201ENST00000294008 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
SLX4-201ENST00000294008 LINC00574Q9H8X3 128 aa8.63□□□□□ -1.03
SLX4-201ENST00000294008 NBDYA0A0U1RRE5 68 aa8.63□□□□□ -1.03
SLX4-201ENST00000294008 K7EQZ3 153 aa8.62□□□□□ -1.03
SLX4-201ENST00000294008 LUZP6Q538Z0 58 aa8.61□□□□□ -1.03
SLX4-201ENST00000294008 KIAA1549LQ6ZVL6 1849 aa8.6□□□□□ -1.03
SLX4-201ENST00000294008 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms