RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 LINC00612Q8N6U2 182 aa1.87□□□□□ -2.11
DMD-201ENST00000288447 PLXNB1O43157 2135 aa1.87□□□□□ -2.11
DMD-201ENST00000288447 FXYD3Q14802 87 aa1.87□□□□□ -2.11
DMD-201ENST00000288447 ARFGEF3Q5TH69 2177 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 M0R2N4 97 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 INE1O15225 51 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 Q6ZS52 159 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 IGLV4-60A0A075B6I1 120 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 NDUFA1O15239 70 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 ZNF407Q9C0G0 2248 aa1.86□□□□□ -2.11
DMD-201ENST00000288447 ESPL1Q14674 2120 aa1.85□□□□□ -2.11
DMD-201ENST00000288447 IGKV2-29A2NJV5 120 aaPredicted RBP1.85□□□□□ -2.11
DMD-201ENST00000288447 LY6G6CO95867 125 aa1.85□□□□□ -2.11
DMD-201ENST00000288447 HRES1P13985 223 aa1.85□□□□□ -2.11
DMD-201ENST00000288447 TFF3Q07654 80 aa1.85□□□□□ -2.11
DMD-201ENST00000288447 Q96NJ1 140 aa1.85□□□□□ -2.11
DMD-201ENST00000288447 HEATR1Q9H583 2144 aaKnown RBP1.85□□□□□ -2.11
DMD-201ENST00000288447 ABCA7Q8IZY2 2146 aa1.85□□□□□ -2.11
DMD-201ENST00000288447 LYNX1G3V0Z9 82 aa1.84□□□□□ -2.11
DMD-201ENST00000288447 COA5Q86WW8 74 aa1.84□□□□□ -2.11
DMD-201ENST00000288447 PRKDCP78527 4128 aaKnown RBP1.84□□□□□ -2.11
DMD-201ENST00000288447 ETDCA0A1B0GVM5 59 aa1.84□□□□□ -2.11
DMD-201ENST00000288447 IGKV2-40A0A087WW87 121 aaPredicted RBP1.84□□□□□ -2.12
DMD-201ENST00000288447 IGKV2D-40P01614 121 aaPredicted RBP1.84□□□□□ -2.12
DMD-201ENST00000288447 NDUFA4O00483 81 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 RNASE3P12724 160 aaKnown RBP1.83□□□□□ -2.12
DMD-201ENST00000288447 DEFA4P12838 97 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 WFDC10AQ9H1F0 79 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 SNRNP200O75643 2136 aaKnown RBP1.83□□□□□ -2.12
DMD-201ENST00000288447 RPL38P63173 70 aaKnown RBP1.83□□□□□ -2.12
DMD-201ENST00000288447 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 Q6ZTI0 123 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 KRTAP9-7A8MTY7 169 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 MAPK1IP1LQ8NDC0 245 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 KRTAP4-5Q9BYR2 181 aa1.83□□□□□ -2.12
DMD-201ENST00000288447 TRGV2A0A075B6R0 118 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 TRBV6-4A0A1B0GX49 114 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 RPS27LQ71UM5 84 aaKnown RBP1.82□□□□□ -2.12
DMD-201ENST00000288447 ARHGAP5-AS1Q96IT6 56 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 MYO9BQ13459 2157 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 PI4KAP42356 2102 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 KRTAP29-1A8MX34 341 aaPredicted RBP1.82□□□□□ -2.12
DMD-201ENST00000288447 CRIP1P50238 77 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 LINC00308Q8TCZ7 52 aa1.82□□□□□ -2.12
DMD-201ENST00000288447 HIGD2BQ4VC39 106 aa1.81□□□□□ -2.12
DMD-201ENST00000288447 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
DMD-201ENST00000288447 SVILO95425 2214 aa1.81□□□□□ -2.12
DMD-201ENST00000288447 C5orf56Q8N8D9 126 aa1.81□□□□□ -2.12
DMD-201ENST00000288447 ARID1AO14497 2285 aa1.81□□□□□ -2.12
DMD-201ENST00000288447 DEFB116Q30KQ4 102 aa1.81□□□□□ -2.12
DMD-201ENST00000288447 DIDO1Q9BTC0 2240 aaKnown RBP1.8□□□□□ -2.12
DMD-201ENST00000288447 A0A096LNT2 108 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 SPINK4O60575 86 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 NDUFA3O95167 84 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 LINC00315P59091 139 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 WFDC9Q8NEX5 89 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 CCL26Q9Y258 94 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
DMD-201ENST00000288447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.79□□□□□ -2.12
DMD-201ENST00000288447 A0A087WYN8 130 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 KRTAP24-1Q3LI83 254 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 MINOS1-NBL1R4GNA1 71 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 POLR2KP53803 58 aaKnown RBP1.79□□□□□ -2.12
DMD-201ENST00000288447 COX7BP24311 80 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 C10orf55Q5SWW7 151 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 SFTA2Q6UW10 78 aa1.79□□□□□ -2.12
DMD-201ENST00000288447 IGKV2-28A0A075B6P5 120 aa1.78□□□□□ -2.12
DMD-201ENST00000288447 IGKV2D-28P01615 120 aa1.78□□□□□ -2.12
DMD-201ENST00000288447 R4GN34 69 aa1.78□□□□□ -2.12
DMD-201ENST00000288447 CABIN1Q9Y6J0 2220 aa1.78□□□□□ -2.12
DMD-201ENST00000288447 IGKV2D-24A0A075B6R9 120 aa1.78□□□□□ -2.12
DMD-201ENST00000288447 KRTAP12-2P59991 146 aa1.78□□□□□ -2.12
DMD-201ENST00000288447 KRTAP11-1Q8IUC1 163 aa1.78□□□□□ -2.13
DMD-201ENST00000288447 TRGV1A0A0A0MS02 117 aa1.77□□□□□ -2.13
DMD-201ENST00000288447 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
DMD-201ENST00000288447 Q6ZQY7 126 aa1.77□□□□□ -2.13
DMD-201ENST00000288447 ANGP03950 147 aaKnown RBP1.77□□□□□ -2.13
DMD-201ENST00000288447 FDCSPQ8NFU4 85 aa1.77□□□□□ -2.13
DMD-201ENST00000288447 MED13Q9UHV7 2174 aa1.76□□□□□ -2.13
DMD-201ENST00000288447 NCR3O14931 201 aa1.76□□□□□ -2.13
DMD-201ENST00000288447 Q8IZM0 81 aa1.76□□□□□ -2.13
DMD-201ENST00000288447 SPRR5A0A1B0GTR4 108 aa1.76□□□□□ -2.13
DMD-201ENST00000288447 LY6EQ16553 131 aa1.76□□□□□ -2.13
DMD-201ENST00000288447 KLK9Q2XQG4 91 aa1.76□□□□□ -2.13
DMD-201ENST00000288447 LOC730098B7Z3J9 87 aa1.75□□□□□ -2.13
DMD-201ENST00000288447 LRCOL1A6NCL2 159 aa1.75□□□□□ -2.13
DMD-201ENST00000288447 KRTAP10-8P60410 259 aa1.75□□□□□ -2.13
DMD-201ENST00000288447 GAFA1Q96PS6 74 aa1.75□□□□□ -2.13
DMD-201ENST00000288447 KRTAP5-3Q6L8H2 238 aa1.75□□□□□ -2.13
DMD-201ENST00000288447 IGLV5-48A0A075B6I7 105 aa1.74□□□□□ -2.13
DMD-201ENST00000288447 SMIM11BQ8TCY0 68 aa1.74□□□□□ -2.13
DMD-201ENST00000288447 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
DMD-201ENST00000288447 COX6B2Q6YFQ2 88 aa1.74□□□□□ -2.13
DMD-201ENST00000288447 MRPL33O75394 65 aaKnown RBP1.74□□□□□ -2.13
DMD-201ENST00000288447 CUL9Q8IWT3 2517 aa1.74□□□□□ -2.13
DMD-201ENST00000288447 G3V318 75 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms