RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TSHBP01222 138 aa5.97□□□□□ -1.45
LRTM1-201ENST00000273286 POLR2KP53803 58 aaKnown RBP5.97□□□□□ -1.45
LRTM1-201ENST00000273286 FABP9Q0Z7S8 132 aa5.97□□□□□ -1.45
LRTM1-201ENST00000273286 KIR2DL4Q99706 377 aa5.97□□□□□ -1.45
LRTM1-201ENST00000273286 MAP1LC3AQ9H492 121 aa5.97□□□□□ -1.45
LRTM1-201ENST00000273286 SMKR1H3BMG3 65 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 COX7A2LO14548 114 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 VCYO14598 125 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 APOMO95445 188 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 FCER1GP30273 86 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 RPL32P62910 135 aaKnown RBP5.96□□□□□ -1.46
LRTM1-201ENST00000273286 C2orf48Q96LS8 159 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
LRTM1-201ENST00000273286 NPYP01303 97 aa5.95□□□□□ -1.46
LRTM1-201ENST00000273286 RAB5AP20339 215 aa5.95□□□□□ -1.46
LRTM1-201ENST00000273286 SMIM2Q9BVW6 85 aa5.95□□□□□ -1.46
LRTM1-201ENST00000273286 COLCA2A8K830 154 aa5.94□□□□□ -1.46
LRTM1-201ENST00000273286 F8WDY8 70 aa5.94□□□□□ -1.46
LRTM1-201ENST00000273286 K7EMI3 77 aa5.94□□□□□ -1.46
LRTM1-201ENST00000273286 SCO1O75880 301 aa5.94□□□□□ -1.46
LRTM1-201ENST00000273286 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
LRTM1-201ENST00000273286 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
LRTM1-201ENST00000273286 NXT2Q9NPJ8 142 aaKnown RBP5.94□□□□□ -1.46
LRTM1-201ENST00000273286 KIAA1644Q3SXP7 199 aa5.93□□□□□ -1.46
LRTM1-201ENST00000273286 OR10D4PQ8NGN7 298 aa5.93□□□□□ -1.46
LRTM1-201ENST00000273286 ALKBH7Q9BT30 221 aaPredicted RBP5.93□□□□□ -1.46
LRTM1-201ENST00000273286 TIMM21Q9BVV7 248 aa5.93□□□□□ -1.46
LRTM1-201ENST00000273286 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
LRTM1-201ENST00000273286 G0S2P27469 103 aa5.92□□□□□ -1.46
LRTM1-201ENST00000273286 Q8N8P6 123 aa5.92□□□□□ -1.46
LRTM1-201ENST00000273286 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
LRTM1-201ENST00000273286 TRAV13-1A0A0B4J241 112 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 LOC389332A0A1B0GUA5 103 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.91□□□□□ -1.46
LRTM1-201ENST00000273286 RAB5BP61020 215 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 RPL18AQ02543 176 aaKnown RBP5.91□□□□□ -1.46
LRTM1-201ENST00000273286 ORMDL2Q53FV1 153 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 C9orf116Q5BN46 136 aaPredicted RBP5.91□□□□□ -1.46
LRTM1-201ENST00000273286 TRGC2P03986 189 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 FA2HQ7L5A8 372 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
LRTM1-201ENST00000273286 MRPL35Q9NZE8 188 aaKnown RBP5.91□□□□□ -1.46
LRTM1-201ENST00000273286 A0A1W2PNN7 141 aa5.9□□□□□ -1.47
LRTM1-201ENST00000273286 LINC01549A6NIU2 74 aa5.9□□□□□ -1.47
LRTM1-201ENST00000273286 C1orf137Q5JT78 98 aa5.9□□□□□ -1.47
LRTM1-201ENST00000273286 NDUFA1O15239 70 aa5.89□□□□□ -1.47
LRTM1-201ENST00000273286 IFI27P40305 119 aaPredicted RBP5.89□□□□□ -1.47
LRTM1-201ENST00000273286 C5orf38Q86SI9 138 aa5.89□□□□□ -1.47
LRTM1-201ENST00000273286 C18orf32Q8TCD1 76 aa5.89□□□□□ -1.47
LRTM1-201ENST00000273286 SPANXA1Q9NS26 97 aa5.89□□□□□ -1.47
LRTM1-201ENST00000273286 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
LRTM1-201ENST00000273286 TLX1NBP0CAT3 122 aa5.88□□□□□ -1.47
LRTM1-201ENST00000273286 LCE1FQ5T754 118 aa5.88□□□□□ -1.47
LRTM1-201ENST00000273286 Q6ZUT4 128 aa5.88□□□□□ -1.47
LRTM1-201ENST00000273286 BAGE3Q86Y29 109 aa5.88□□□□□ -1.47
LRTM1-201ENST00000273286 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
LRTM1-201ENST00000273286 CYSLTR1Q9Y271 337 aa5.88□□□□□ -1.47
LRTM1-201ENST00000273286 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
LRTM1-201ENST00000273286 IGHV3OR16-9A0A0B4J2B5 98 aa5.87□□□□□ -1.47
LRTM1-201ENST00000273286 LINC01546A6NGU7 62 aa5.87□□□□□ -1.47
LRTM1-201ENST00000273286 LINC00614P0C842 121 aa5.87□□□□□ -1.47
LRTM1-201ENST00000273286 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
LRTM1-201ENST00000273286 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
LRTM1-201ENST00000273286 RNASE13Q5GAN3 156 aaKnown RBP5.87□□□□□ -1.47
LRTM1-201ENST00000273286 ORAOV1Q8WV07 137 aa5.87□□□□□ -1.47
LRTM1-201ENST00000273286 A0A087WZ39 114 aa5.86□□□□□ -1.47
LRTM1-201ENST00000273286 H0Y9J4 135 aa5.86□□□□□ -1.47
LRTM1-201ENST00000273286 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
LRTM1-201ENST00000273286 HSBP1O75506 76 aa5.85□□□□□ -1.47
LRTM1-201ENST00000273286 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
LRTM1-201ENST00000273286 CFC1P0CG37 223 aa5.85□□□□□ -1.47
LRTM1-201ENST00000273286 RPL13AP40429 203 aaKnown RBP5.85□□□□□ -1.47
LRTM1-201ENST00000273286 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
LRTM1-201ENST00000273286 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
LRTM1-201ENST00000273286 OPRPNQ99935 248 aaPredicted RBP5.85□□□□□ -1.47
LRTM1-201ENST00000273286 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BKO60814 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HBDP02042 147 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BJP06899 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BOP23527 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BBP33778 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BDP58876 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BCP62807 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST2H2BEQ16778 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.84□□□□□ -1.47
LRTM1-201ENST00000273286 Q6ZN92 141 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BHQ93079 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BNQ99877 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 HIST1H2BMQ99879 126 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 PYGO1Q9Y3Y4 419 aa5.84□□□□□ -1.47
LRTM1-201ENST00000273286 UBE2D1P51668 147 aa5.83□□□□□ -1.48
LRTM1-201ENST00000273286 RPL39P62891 51 aaKnown RBP5.83□□□□□ -1.48
LRTM1-201ENST00000273286 TOMM6Q96B49 74 aa5.83□□□□□ -1.48
LRTM1-201ENST00000273286 TMEM141Q96I45 108 aa5.83□□□□□ -1.48
LRTM1-201ENST00000273286 NDUFC2-KCTD14E9PQ53 114 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 UBE2BP63146 152 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 LINC01561Q8N1V8 128 aa5.82□□□□□ -1.48
LRTM1-201ENST00000273286 PACRGQ96M98 296 aaPredicted RBP5.82□□□□□ -1.48
LRTM1-201ENST00000273286 TIMM17AQ99595 171 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms