RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ADAMTSL4-AS1Q5T5F5 129 aa9.95□□□□□ -0.82
CDH3-201ENST00000264012 FLNBO75369 2602 aaKnown RBP9.95□□□□□ -0.82
CDH3-201ENST00000264012 EGFEM1PQ0D2K5 195 aa9.95□□□□□ -0.82
CDH3-201ENST00000264012 SERP2Q8N6R1 65 aa9.95□□□□□ -0.82
CDH3-201ENST00000264012 C20orf197Q8N268 126 aa9.94□□□□□ -0.82
CDH3-201ENST00000264012 PCSK5Q92824 1860 aa9.94□□□□□ -0.82
CDH3-201ENST00000264012 C3orf84H3BNL1 204 aa9.93□□□□□ -0.82
CDH3-201ENST00000264012 COX7CP15954 63 aa9.93□□□□□ -0.82
CDH3-201ENST00000264012 C11orf72Q8NBR9 251 aa9.93□□□□□ -0.82
CDH3-201ENST00000264012 PCNTO95613 3336 aa9.93□□□□□ -0.82
CDH3-201ENST00000264012 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
CDH3-201ENST00000264012 A0A1B0GUV1 79 aa9.92□□□□□ -0.82
CDH3-201ENST00000264012 FAM236DA0A1B0GTK5 79 aa9.92□□□□□ -0.82
CDH3-201ENST00000264012 M0QXV9 152 aa9.92□□□□□ -0.82
CDH3-201ENST00000264012 FAM236CP0DP71 79 aa9.92□□□□□ -0.82
CDH3-201ENST00000264012 PTPRBP23467 1997 aa9.91□□□□□ -0.82
CDH3-201ENST00000264012 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
CDH3-201ENST00000264012 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
CDH3-201ENST00000264012 CHD7Q9P2D1 2997 aa9.9□□□□□ -0.82
CDH3-201ENST00000264012 USP17L23D6RBM5 183 aa9.9□□□□□ -0.82
CDH3-201ENST00000264012 LINC00315P59091 139 aa9.9□□□□□ -0.82
CDH3-201ENST00000264012 PRR3P79522 188 aaKnown RBP9.9□□□□□ -0.82
CDH3-201ENST00000264012 RPL28P46779 137 aaKnown RBP9.9□□□□□ -0.83
CDH3-201ENST00000264012 BRK1Q8WUW1 75 aa9.89□□□□□ -0.83
CDH3-201ENST00000264012 TRBV10-3A0A0K0K1G6 114 aa9.89□□□□□ -0.83
CDH3-201ENST00000264012 LINC01546A6NGU7 62 aa9.89□□□□□ -0.83
CDH3-201ENST00000264012 IGKV4-1P06312 121 aa9.88□□□□□ -0.83
CDH3-201ENST00000264012 LYPD5Q6UWN5 251 aa9.88□□□□□ -0.83
CDH3-201ENST00000264012 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
CDH3-201ENST00000264012 FHL3Q13643 280 aa9.87□□□□□ -0.83
CDH3-201ENST00000264012 Q6JHZ5 121 aa9.87□□□□□ -0.83
CDH3-201ENST00000264012 NUPR2A6NF83 97 aa9.87□□□□□ -0.83
CDH3-201ENST00000264012 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
CDH3-201ENST00000264012 F8P00451 2351 aa9.86□□□□□ -0.83
CDH3-201ENST00000264012 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
CDH3-201ENST00000264012 NTM-AS1Q6ZSK4 140 aa9.85□□□□□ -0.83
CDH3-201ENST00000264012 NDUFC1O43677 76 aa9.85□□□□□ -0.83
CDH3-201ENST00000264012 PLAC8L1A1L4L8 177 aa9.85□□□□□ -0.83
CDH3-201ENST00000264012 Q8N814 137 aa9.85□□□□□ -0.83
CDH3-201ENST00000264012 ZNF706Q9Y5V0 76 aaPredicted RBP9.84□□□□□ -0.83
CDH3-201ENST00000264012 COL27A1Q8IZC6 1860 aaPredicted RBP9.84□□□□□ -0.83
CDH3-201ENST00000264012 ATP5EP56381 51 aaPredicted RBP9.83□□□□□ -0.84
CDH3-201ENST00000264012 A0A087WYN8 130 aa9.83□□□□□ -0.84
CDH3-201ENST00000264012 HECTD1Q9ULT8 2610 aa9.83□□□□□ -0.84
CDH3-201ENST00000264012 NDUFC2-KCTD14E9PQ53 114 aa9.83□□□□□ -0.84
CDH3-201ENST00000264012 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
CDH3-201ENST00000264012 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
CDH3-201ENST00000264012 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
CDH3-201ENST00000264012 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
CDH3-201ENST00000264012 MUC4Q99102 2169 aa9.81□□□□□ -0.84
CDH3-201ENST00000264012 KLK9Q2XQG4 91 aa9.8□□□□□ -0.84
CDH3-201ENST00000264012 FSHBP01225 129 aa9.8□□□□□ -0.84
CDH3-201ENST00000264012 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
CDH3-201ENST00000264012 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
CDH3-201ENST00000264012 C2orf48Q96LS8 159 aa9.8□□□□□ -0.84
CDH3-201ENST00000264012 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
CDH3-201ENST00000264012 SEC61GP60059 68 aa9.8□□□□□ -0.84
CDH3-201ENST00000264012 IGLV9-49A0A0B4J1Y8 123 aa9.79□□□□□ -0.84
CDH3-201ENST00000264012 WFDC13Q8IUB5 93 aa9.79□□□□□ -0.84
CDH3-201ENST00000264012 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
CDH3-201ENST00000264012 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
CDH3-201ENST00000264012 Q9UF83 564 aa9.78□□□□□ -0.84
CDH3-201ENST00000264012 C5orf42Q9H799 3197 aa9.78□□□□□ -0.84
CDH3-201ENST00000264012 F8WDY8 70 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 REG3GQ6UW15 175 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 LINC00337Q8N6G1 96 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 CASC2Q6XLA1 102 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
CDH3-201ENST00000264012 Q6ZRU5 148 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 FAM19A3Q7Z5A8 133 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
CDH3-201ENST00000264012 C1orf137Q5JT78 98 aa9.75□□□□□ -0.85
CDH3-201ENST00000264012 HTTP42858 3142 aa9.75□□□□□ -0.85
CDH3-201ENST00000264012 CHD9Q3L8U1 2897 aa9.75□□□□□ -0.85
CDH3-201ENST00000264012 X6R8D5 127 aa9.75□□□□□ -0.85
CDH3-201ENST00000264012 TRBV7-7A0A0K0K1E9 115 aa9.74□□□□□ -0.85
CDH3-201ENST00000264012 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
CDH3-201ENST00000264012 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
CDH3-201ENST00000264012 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
CDH3-201ENST00000264012 A8MTW9 85 aa9.73□□□□□ -0.85
CDH3-201ENST00000264012 SNURFQ9Y675 71 aa9.72□□□□□ -0.85
CDH3-201ENST00000264012 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
CDH3-201ENST00000264012 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.85
CDH3-201ENST00000264012 IGLV5-45A0A087WSX0 123 aa9.71□□□□□ -0.86
CDH3-201ENST00000264012 LINC00575Q6W349 94 aa9.71□□□□□ -0.86
CDH3-201ENST00000264012 ESRGQ1W209 222 aa9.71□□□□□ -0.86
CDH3-201ENST00000264012 SMIM26A0A096LP01 95 aa9.7□□□□□ -0.86
CDH3-201ENST00000264012 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
CDH3-201ENST00000264012 IGLV5-52A0A0A0MRZ9 124 aa9.7□□□□□ -0.86
CDH3-201ENST00000264012 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
CDH3-201ENST00000264012 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
CDH3-201ENST00000264012 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
CDH3-201ENST00000264012 USP24Q9UPU5 2620 aa9.69□□□□□ -0.86
CDH3-201ENST00000264012 A0A087WVE0 104 aa9.69□□□□□ -0.86
CDH3-201ENST00000264012 PRYO14603 147 aa9.69□□□□□ -0.86
CDH3-201ENST00000264012 V9GYY9 64 aa9.68□□□□□ -0.86
CDH3-201ENST00000264012 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
CDH3-201ENST00000264012 C1orf134Q5TEV5 83 aa9.66□□□□□ -0.86
CDH3-201ENST00000264012 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
CDH3-201ENST00000264012 Q9BRP9 147 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms