RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 LINC00575Q6W349 94 aa8.57□□□□□ -1.04
CHMP2B-201ENST00000263780 Q6ZQT0 140 aa8.57□□□□□ -1.04
CHMP2B-201ENST00000263780 MRAPQ8TCY5 172 aa8.57□□□□□ -1.04
CHMP2B-201ENST00000263780 MUC7Q8TAX7 377 aa8.57□□□□□ -1.04
CHMP2B-201ENST00000263780 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
CHMP2B-201ENST00000263780 MAPK1IP1LQ8NDC0 245 aa8.56□□□□□ -1.04
CHMP2B-201ENST00000263780 C6orf99Q4VX62 202 aa8.56□□□□□ -1.04
CHMP2B-201ENST00000263780 C6orf223Q8N319 242 aa8.56□□□□□ -1.04
CHMP2B-201ENST00000263780 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
CHMP2B-201ENST00000263780 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
CHMP2B-201ENST00000263780 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
CHMP2B-201ENST00000263780 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
CHMP2B-201ENST00000263780 CXCL6P80162 114 aa8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 LINC00482Q8N8I6 264 aa8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 H7BZZ5 65 aa8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 RPL35AP18077 110 aaKnown RBP8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 CSNK1G2-AS1Q8NCQ2 148 aa8.54□□□□□ -1.04
CHMP2B-201ENST00000263780 LINC01547P58512 204 aaPredicted RBP8.53□□□□□ -1.04
CHMP2B-201ENST00000263780 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
CHMP2B-201ENST00000263780 NDUFC1O43677 76 aa8.53□□□□□ -1.04
CHMP2B-201ENST00000263780 COL12A1Q99715 3063 aa8.52□□□□□ -1.04
CHMP2B-201ENST00000263780 HAMPP81172 84 aa8.52□□□□□ -1.05
CHMP2B-201ENST00000263780 KIAA0087Q14695 138 aa8.52□□□□□ -1.05
CHMP2B-201ENST00000263780 GYPEP15421 78 aa8.52□□□□□ -1.05
CHMP2B-201ENST00000263780 C9orf66Q5T8R8 295 aa8.51□□□□□ -1.05
CHMP2B-201ENST00000263780 Q6ZVQ6 151 aa8.51□□□□□ -1.05
CHMP2B-201ENST00000263780 C2CD3Q4AC94 2353 aa8.5□□□□□ -1.05
CHMP2B-201ENST00000263780 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
CHMP2B-201ENST00000263780 SMIM26A0A096LP01 95 aa8.49□□□□□ -1.05
CHMP2B-201ENST00000263780 DEFB130BP0DP73 79 aa8.49□□□□□ -1.05
CHMP2B-201ENST00000263780 DEFB130AP0DP74 79 aa8.49□□□□□ -1.05
CHMP2B-201ENST00000263780 PRO0255Q9UI72 69 aa8.49□□□□□ -1.05
CHMP2B-201ENST00000263780 CLPSL2Q6UWE3 100 aa8.48□□□□□ -1.05
CHMP2B-201ENST00000263780 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
CHMP2B-201ENST00000263780 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
CHMP2B-201ENST00000263780 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
CHMP2B-201ENST00000263780 IGLV1-51P01701 117 aa8.47□□□□□ -1.05
CHMP2B-201ENST00000263780 PLA2G2AP14555 144 aa8.47□□□□□ -1.05
CHMP2B-201ENST00000263780 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
CHMP2B-201ENST00000263780 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
CHMP2B-201ENST00000263780 IGLV6-57P01721 117 aa8.46□□□□□ -1.05
CHMP2B-201ENST00000263780 WFDC10AQ9H1F0 79 aa8.46□□□□□ -1.05
CHMP2B-201ENST00000263780 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
CHMP2B-201ENST00000263780 VPS13CQ709C8 3753 aa8.46□□□□□ -1.06
CHMP2B-201ENST00000263780 CRYBG3Q68DQ2 2970 aa8.46□□□□□ -1.06
CHMP2B-201ENST00000263780 Q6ZQY7 126 aa8.45□□□□□ -1.06
CHMP2B-201ENST00000263780 C9orf116Q5BN46 136 aaPredicted RBP8.45□□□□□ -1.06
CHMP2B-201ENST00000263780 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.45□□□□□ -1.06
CHMP2B-201ENST00000263780 F8WEM9 126 aa8.44□□□□□ -1.06
CHMP2B-201ENST00000263780 REG3AQ06141 175 aa8.44□□□□□ -1.06
CHMP2B-201ENST00000263780 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
CHMP2B-201ENST00000263780 Q8N3U1 123 aa8.44□□□□□ -1.06
CHMP2B-201ENST00000263780 A0A0J9YWU9 116 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 ZNF843Q8N446 348 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 RMI2Q96E14 147 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 SNURFQ9Y675 71 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 DNAJC9-AS1A6NH13 148 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 Q8NDZ9 215 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
CHMP2B-201ENST00000263780 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
CHMP2B-201ENST00000263780 M0R2N4 97 aa8.42□□□□□ -1.06
CHMP2B-201ENST00000263780 SPAG11BQ08648 103 aa8.42□□□□□ -1.06
CHMP2B-201ENST00000263780 MIFP14174 115 aa8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 BBC3Q96PG8 261 aaPredicted RBP8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 NOTCH3Q9UM47 2321 aa8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 IGLV10-54A0A075B6I4 117 aa8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 DEFB113Q30KQ7 82 aa8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 DOPEY1Q5JWR5 2465 aa8.41□□□□□ -1.06
CHMP2B-201ENST00000263780 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
CHMP2B-201ENST00000263780 LINC01006Q8NI28 216 aa8.4□□□□□ -1.06
CHMP2B-201ENST00000263780 A0A096LPF7 62 aa8.4□□□□□ -1.07
CHMP2B-201ENST00000263780 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.07
CHMP2B-201ENST00000263780 USP9YO00507 2555 aaPredicted RBP8.4□□□□□ -1.07
CHMP2B-201ENST00000263780 LYRM9A8MSI8 78 aa8.39□□□□□ -1.07
CHMP2B-201ENST00000263780 COX7BP24311 80 aa8.39□□□□□ -1.07
CHMP2B-201ENST00000263780 NREPQ16612 68 aa8.39□□□□□ -1.07
CHMP2B-201ENST00000263780 LINC00336Q6ZUF6 198 aa8.39□□□□□ -1.07
CHMP2B-201ENST00000263780 MAP1AP78559 2803 aaPredicted RBP8.39□□□□□ -1.07
CHMP2B-201ENST00000263780 CYSRT1A8MQ03 144 aa8.38□□□□□ -1.07
CHMP2B-201ENST00000263780 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
CHMP2B-201ENST00000263780 C16orf95Q9H693 158 aa8.38□□□□□ -1.07
CHMP2B-201ENST00000263780 BPY2O14599 106 aa8.37□□□□□ -1.07
CHMP2B-201ENST00000263780 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
CHMP2B-201ENST00000263780 CR1P17927 2039 aa8.37□□□□□ -1.07
CHMP2B-201ENST00000263780 MYO9AB2RTY4 2548 aa8.37□□□□□ -1.07
CHMP2B-201ENST00000263780 ZNF73O43830 326 aaPredicted RBP8.37□□□□□ -1.07
CHMP2B-201ENST00000263780 CELSR2Q9HCU4 2923 aa8.37□□□□□ -1.07
CHMP2B-201ENST00000263780 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
CHMP2B-201ENST00000263780 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
CHMP2B-201ENST00000263780 ELOF1P60002 83 aaKnown RBP8.36□□□□□ -1.07
CHMP2B-201ENST00000263780 WNK1Q9H4A3 2382 aa8.35□□□□□ -1.07
CHMP2B-201ENST00000263780 X6R8D5 127 aa8.35□□□□□ -1.07
CHMP2B-201ENST00000263780 USP9XQ93008 2570 aaPredicted RBP8.35□□□□□ -1.07
CHMP2B-201ENST00000263780 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms